Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 1.5e-71 272.7 134 100.0
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 3.7e-62 241.5 134 85.1
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 3.5e-60 235.0 133 85.0
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 4.2e-58 228.0 134 80.6
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 3.0e-48 195.3 135 71.1
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.5e-47 193.0 134 68.7
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.5e-47 193.0 134 68.7
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.7e-47 191.0 134 69.4
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 5.7e-47 191.0 133 69.9
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 7.5e-47 190.7 134 69.4
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 7.5e-47 190.7 134 69.4
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 7.5e-47 190.7 137 68.6
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 2.2e-46 189.1 136 69.1
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 3.7e-46 188.3 132 70.5
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 6.3e-46 187.6 137 68.6
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.4e-45 186.4 134 70.1
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 1.8e-45 186.0 136 70.6
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.8e-45 186.0 134 70.1
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 2.4e-45 185.7 136 68.4
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 3.1e-45 185.3 132 68.9
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 3.1e-45 185.3 134 68.7
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 4.1e-45 184.9 132 66.7
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 4.1e-45 184.9 136 70.6
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 5.4e-45 184.5 135 65.9
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 1.2e-44 183.3 135 65.9
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 5.9e-44 181.0 134 68.7
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 7.7e-44 180.6 132 66.7
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 7.7e-44 180.6 137 69.3
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.0e-43 180.3 99 78.8
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.0e-43 180.3 135 64.4
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 1.0e-43 180.3 133 67.7
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.3e-43 179.9 135 67.4
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 2.3e-43 179.1 135 67.4
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 3.8e-43 178.3 136 68.4
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 5.0e-43 177.9 134 67.9
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 8.6e-43 177.2 140 63.6
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.1e-42 176.8 99 77.8
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 1.1e-42 176.8 135 65.2
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 2.5e-42 175.6 138 61.6
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.5e-42 175.6 132 66.7
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 2.5e-42 175.6 99 79.8
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.3e-42 175.3 136 66.2
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.3e-42 175.3 136 66.2
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 3.3e-42 175.3 130 68.5
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 3.3e-42 175.3 136 64.0
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 4.2e-42 174.9 142 65.5
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 4.2e-42 174.9 136 65.4
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 5.6e-42 174.5 127 68.5
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 5.6e-42 174.5 131 64.9
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 1.2e-41 173.3 139 62.6
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 1.2e-41 173.3 137 65.7
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.6e-41 172.9 146 61.6
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 2.1e-41 172.6 135 65.2
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 2.1e-41 172.6 146 62.3
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.1e-41 172.6 132 62.9
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 2.8e-41 172.2 133 63.2
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 2.8e-41 172.2 131 64.1
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 8.0e-41 170.6 105 70.5
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 8.0e-41 170.6 132 62.1
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.0e-40 170.2 129 65.1
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.0e-40 170.2 136 64.0
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 1.8e-40 169.5 148 60.8
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 4.0e-40 168.3 146 61.0
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 5.2e-40 167.9 143 61.5
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 5.2e-40 167.9 143 61.5
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 5.2e-40 167.9 132 62.9
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 5.2e-40 167.9 97 77.3
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 5.2e-40 167.9 146 61.0
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 8.9e-40 167.2 143 60.8
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 8.9e-40 167.2 143 60.8
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 8.9e-40 167.2 143 60.8
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.2e-39 166.8 145 60.0
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.5e-39 166.4 95 75.8
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 1.5e-39 166.4 134 63.4
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.5e-39 166.4 140 61.4
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 1.5e-39 166.4 115 68.7
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 2.0e-39 166.0 121 64.5
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 2.0e-39 166.0 121 64.5
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 2.0e-39 166.0 145 59.3
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 2.0e-39 166.0 144 60.4
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 2.0e-39 166.0 145 59.3
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 2.0e-39 166.0 144 60.4
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.0e-39 166.0 98 72.4
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 2.6e-39 165.6 145 59.3
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.6e-39 165.6 132 62.1
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 2.6e-39 165.6 146 59.6
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 2.6e-39 165.6 102 73.5
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 4.4e-39 164.9 151 58.3
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 4.4e-39 164.9 148 58.1
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 9.8e-39 163.7 137 62.0
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 2.9e-38 162.2 121 63.6
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 2.9e-38 162.2 121 63.6
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 2.9e-38 162.2 93 75.3
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 2.9e-38 162.2 123 65.9
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 6.4e-38 161.0 135 60.7
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 1.4e-37 159.8 144 59.0
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.8e-37 159.5 99 74.7
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.8e-37 159.5 99 74.7
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 1.8e-37 159.5 96 75.0
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 7.0e-37 157.5 93 72.0
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 4.6e-36 154.8 98 69.4
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.3e-35 153.3 98 70.4
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.9e-34 149.4 115 61.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 5.6e-34 147.9 138 57.2
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 5.6e-34 147.9 138 57.2
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 5.2e-32 141.4 90 66.7
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.6e-31 139.0 130 51.5
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.4e-31 138.3 111 59.5
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.9e-29 132.9 95 56.8
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 4.1e-29 131.7 96 59.4
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 7.0e-29 131.0 132 48.5
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 3.5e-28 128.6 92 58.7
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 7.3e-26 120.9 70 77.1
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 6.2e-25 117.9 71 73.2
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 8.1e-25 117.5 109 51.4
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 1.1e-24 117.1 95 52.6
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.8e-24 116.3 109 51.4
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 3.1e-24 115.5 96 55.2
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 9.8e-23 110.5 91 52.7
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 2.7e-20 102.4 63 69.8
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 6.6e-19 97.8 89 46.1
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.1e-18 97.1 92 45.7
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 8.9e-16 87.4 75 58.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 2.0e-15 86.3 58 69.0
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 7.6e-15 84.3 75 58.7
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 3.6e-09 65.5 65 56.9
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 1.5e-07 60.1 41 61.0


User provided reference genes

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