Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00556 Beta vulgaris HOM05D004463 ORTHO05D004724 7.4e-78 295.0 352 100.0
Hund26868 Selenicereus undatus HOM05D004463 ORTHO05D004724 5.6e-25 119.4 331 71.6
MELO3C013423.2 Cucumis melo HOM05D004463 ORTHO05D004724 1.2e-16 91.7 332 59.0
CsaV3_7G000350 Cucumis sativus L. HOM05D004463 ORTHO05D004724 1.6e-16 91.3 332 58.7
ClCG02G004610 Citrullus lanatus HOM05D004463 ORTHO05D004724 3.6e-16 90.1 332 59.0
QL11p046341 Quercus lobata HOM05D004463 ORTHO05D004724 2.3e-15 87.4 331 59.5
Sed0022229 Sechium edule HOM05D004463 ORTHO05D004724 5.2e-15 86.3 332 58.7
TWI31G1301 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 2.6e-14 84.0 336 60.7
arahy.Tifrunner.gnm1.ann1.0JY1T4 Arachis hypogaea HOM05D004463 ORTHO05D004724 3.4e-14 83.6 332 59.0
arahy.Tifrunner.gnm1.ann1.2L6AT5 Arachis hypogaea HOM05D004463 ORTHO05D004724 3.4e-14 83.6 332 59.0
Cpa.g.sc150.22 Carica papaya HOM05D004463 ORTHO05D004724 3.4e-14 83.6 330 60.9
MD00G1040200 Malus domestica HOM05D004463 ORTHO05D004724 3.4e-14 83.6 333 60.7
MD10G1063900 Malus domestica HOM05D004463 ORTHO05D004724 3.4e-14 83.6 333 59.8
Glyma.04G008700 Glycine max HOM05D004463 ORTHO05D004724 5.8e-14 82.8 332 59.9
Glyma.06G008500 Glycine max HOM05D004463 ORTHO05D004724 5.8e-14 82.8 332 61.1
Phvul.009G003600 Phaseolus vulgaris HOM05D004463 ORTHO05D004724 1.3e-13 81.6 332 62.3
TPR.G32219 Trifolium pratense HOM05D004463 ORTHO05D004724 2.9e-13 80.5 333 61.3
Duzib248G1389 Durio zibethinus HOM05D004463 ORTHO05D004724 3.7e-13 80.1 332 57.5
VMungo1309G0843 Vigna mungo HOM05D000018 ORTHO05D001040 4.9e-13 79.7 330 58.2
Lalb_Chr23g0265191 Lupinus albus HOM05D004463 ORTHO05D004724 8.3e-13 79.0 332 59.3
PGR042G1049 Punica granatum HOM05D004463 ORTHO05D004724 2.4e-12 77.4 332 56.6
COL.COLO4_26036 Corchorus olitorius HOM05D004463 ORTHO05D004724 3.2e-12 77.0 333 59.2
Potri.004G161800 Populus trichocarpa HOM05D004463 ORTHO05D004724 3.2e-12 77.0 331 56.2
Lj1g0018700 Lotus japonicus HOM05D004463 ORTHO05D004724 5.4e-12 76.3 335 58.8
Atru.chr5.3137 Acer truncatum HOM05D004463 ORTHO05D004724 9.2e-12 75.5 331 58.6
CANSAT11G2458 Cannabis sativa HOM05D004463 ORTHO05D004724 9.2e-12 75.5 333 58.9
RcHm_v2.0_Chr6g0267601 Rosa chinensis HOM05D004463 ORTHO05D004724 9.2e-12 75.5 332 60.5
CAN.G95.2 Capsicum annuum HOM05D004463 ORTHO05D004724 1.6e-11 74.7 332 56.0
Gohir.A03G199000 Gossypium hirsutum HOM05D004463 ORTHO05D004724 3.5e-11 73.6 335 57.9
Dinv39485 Davidia involucrata HOM05D004463 ORTHO05D004724 4.6e-11 73.2 297 46.5
AUR62034566 Chenopodium quinoa HOM05D004463 ORTHO05D004724 1.7e-10 71.2 87 46.0
Ciclev10029089m.g Citrus clementina HOM05D004463 ORTHO05D004724 2.3e-10 70.9 332 58.1
Eucgr.I01324 Eucalyptus grandis HOM05D004463 ORTHO05D004724 3.9e-10 70.1 332 59.6
Gohir.D02G220400 Gossypium hirsutum HOM05D004463 ORTHO05D004724 3.9e-10 70.1 333 58.9
Gorai.005G248300 Gossypium raimondii HOM05D004463 ORTHO05D004724 1.1e-09 68.6 336 50.6
Oeu036635.1 Olea europaea HOM05D004463 ORTHO05D004724 7.3e-09 65.9 92 41.3
Ca_15338_v3 Cicer arietinum L. HOM05D004463 ORTHO05D004724 9.5e-09 65.5 335 57.0
Haze_03437 Corylus avellana HOM05D004463 ORTHO05D004724 9.5e-09 65.5 260 70.4
AUR62014431 Chenopodium quinoa HOM05D004463 ORTHO05D004724 1.6e-08 64.7 87 43.7
Sopen10g024240 Solanum pennellii HOM05D004463 ORTHO05D004724 1.6e-08 64.7 93 40.9
PGSC0003DMG400026665 Solanum tuberosum HOM05D004463 ORTHO05D004724 1.6e-08 64.7 93 40.9
GSVIVG01009823001 Vitis vinifera HOM05D004463 ORTHO05D004724 1.6e-08 64.7 92 40.2
Prupe.8G085500 Prunus persica HOM05D004463 ORTHO05D004724 2.1e-08 64.3 332 51.5
Sc25g0002840 Simmondsia chinensis HOM05D004463 ORTHO05D004724 2.1e-08 64.3 55 80.0
CiPaw.13G045000 Carya illinoinensis HOM05D004463 ORTHO05D004724 3.6e-08 63.5 93 39.8
DCAR_022913 Daucus carota HOM05D004463 ORTHO05D004724 3.6e-08 63.5 93 38.7
Solyc10g054330.3 Solanum lycopersicum HOM05D004463 ORTHO05D004724 3.6e-08 63.5 93 39.8
Manes.15G189900 Manihot esculenta HOM05D004463 ORTHO05D004724 6.2e-08 62.8 93 39.8
CiPaw.14G035900 Carya illinoinensis HOM05D004463 ORTHO05D004724 8.1e-08 62.4 93 39.8
Cc02_g16980 Coffea canephora HOM05D004463 ORTHO05D004724 8.1e-08 62.4 93 37.6
Thecc.08G037600 Theobroma cacao HOM05D004463 ORTHO05D004724 8.1e-08 62.4 113 46.9
Dinv42004 Davidia involucrata HOM05D004463 ORTHO05D004724 1.1e-07 62.0 93 38.7
HanXRQChr05g0143421 Helianthus annuus HOM05D004463 ORTHO05D004724 1.1e-07 62.0 93 39.8
Thecc.02G075900 Theobroma cacao HOM05D004463 ORTHO05D004724 1.1e-07 62.0 238 65.5
Atru.chr13.360 Acer truncatum HOM05D004463 ORTHO05D004724 1.4e-07 61.6 113 49.6
CiPaw.06G128800 Carya illinoinensis HOM05D004463 ORTHO05D004724 1.4e-07 61.6 93 37.6
Manes.05G152600 Manihot esculenta HOM05D004463 ORTHO05D004724 1.4e-07 61.6 93 39.8
THA.LOC104807766 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 1.4e-07 61.6 330 57.6
GSVIVG01024180001 Vitis vinifera HOM05D004463 ORTHO05D004724 2.3e-07 60.8 224 67.9
Manes.17G001400 Manihot esculenta HOM05D004463 ORTHO05D004724 5.2e-07 59.7 93 38.7
Oeu055628.1 Olea europaea HOM05D004463 ORTHO05D004724 6.8e-07 59.3 92 39.1
Peaxi162Scf00538g00125 Petunia axillaris HOM05D004463 ORTHO05D004724 6.8e-07 59.3 93 36.6
AL2G35540 Arabidopsis lyrata HOM05D004463 ORTHO05D004724 1.2e-06 58.5 92 38.0
Carub.0002s2242 Capsella rubella HOM05D004463 ORTHO05D004724 1.2e-06 58.5 92 38.0
ECA232G1454 Erigeron canadensis HOM05D004463 ORTHO05D004724 1.2e-06 58.5 93 36.6
Aa31LG4G5800 Aethionema arabicum HOM05D004463 ORTHO05D004724 1.5e-06 58.2 92 38.0
Nitab4.5_0001317g0040 Nicotiana tabacum HOM05D004463 ORTHO05D004724 1.5e-06 58.2 93 36.6
Os10g0545300 Oryza sativa ssp. japonica HOM05D004463 ORTHO05D004724 1.5e-06 58.2 92 37.0
TPR.G32170 Trifolium pratense HOM05D004463 ORTHO05D004724 1.5e-06 58.2 93 36.6
Rhsim05G0068600 Rhododendron simsii HOM05D004463 ORTHO05D004724 2.0e-06 57.8 93 37.6
A07p41130 Brassica napus HOM05D004463 ORTHO05D004724 3.4e-06 57.0 92 38.0
C06p49550 Brassica napus HOM05D004463 ORTHO05D004724 3.4e-06 57.0 92 38.0
BolC6t39994H Brassica oleracea HOM05D004463 ORTHO05D004724 3.4e-06 57.0 92 38.0
THA.LOC104813804 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 3.4e-06 57.0 93 37.6
Thhalv10019006m.g Eutrema salsugineum HOM05D004463 ORTHO05D004724 4.4e-06 56.6 91 38.5
Hma1.2p1_0066F.1_g035800 Hydrangea macrophylla HOM05D004463 ORTHO05D004724 4.4e-06 56.6 93 36.6
Sed0016215 Sechium edule HOM05D004463 ORTHO05D004724 4.4e-06 56.6 93 36.6
THA.LOC104804116 Tarenaya hassleriana HOM05D004463 ORTHO05D004724 4.4e-06 56.6 93 38.7
FAN24G1814 Fragaria x ananassa HOM05D004463 ORTHO05D004724 5.8e-06 56.2 113 44.2
Oeu046135.1 Olea europaea HOM05D004463 ORTHO05D004724 7.6e-06 55.8 90 35.6
TWI36G1578 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 7.6e-06 55.8 93 35.5
FvH4_2g10323 Fragaria vesca HOM05D004463 ORTHO05D004724 9.9e-06 55.5 92 37.0
FAN15G3389 Fragaria x ananassa HOM05D004463 ORTHO05D004724 9.9e-06 55.5 92 37.0
FAN20G1990 Fragaria x ananassa HOM05D004463 ORTHO05D004724 9.9e-06 55.5 92 37.0
FAN27G0878 Fragaria x ananassa HOM05D004463 ORTHO05D004724 9.9e-06 55.5 92 37.0


User provided reference genes

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