Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00285 Beta vulgaris HOM05D000151 ORTHO05D000074 6.2e-157 557.4 273 100.0
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.6e-11 74.3 128 35.9
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 6.1e-11 72.4 103 35.0
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 6.7e-10 68.9 126 32.5
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 1.1e-09 68.2 265 25.7
Cfa009634 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.5e-09 67.8 124 33.9
Solyc04g082360.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.5e-09 67.8 103 33.0
FAN07G2876 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.9e-09 67.4 87 41.4
PGSC0003DMG400009902 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.3e-09 66.6 102 33.3
FvH4_4g30110 Fragaria vesca HOM05D000151 ORTHO05D000074 9.7e-09 65.1 88 40.9
Prupe.1G208900 Prunus persica HOM05D000151 ORTHO05D000074 9.7e-09 65.1 112 33.9
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.7e-09 65.1 146 32.2
Aqoxy5G02612 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.3e-08 64.7 108 31.5
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-08 64.7 146 32.2
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 2.2e-08 63.9 280 26.4
FAN12G2490 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.2e-08 63.9 91 39.6
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.2e-08 63.9 127 29.9
FvH4_4g02771 Fragaria vesca HOM05D000151 ORTHO05D000074 2.8e-08 63.5 263 23.2
FAN12G0706 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-08 63.5 95 38.9
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-08 63.5 109 39.4
Lj5g0028068 Lotus japonicus HOM05D000151 ORTHO05D000074 2.8e-08 63.5 109 33.9
FAN23G2079 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.7e-08 63.2 104 36.5
TWI23G0161 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.7e-08 63.2 116 30.2
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-08 63.2 105 36.2
HanXRQChr02g0042691 Helianthus annuus HOM05D000151 ORTHO05D000074 4.8e-08 62.8 129 31.0
Haze_23002 Corylus avellana HOM05D000151 ORTHO05D000074 6.3e-08 62.4 65 44.6
Prupe.3G068500 Prunus persica HOM05D000151 ORTHO05D000074 6.3e-08 62.4 125 29.6
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.3e-08 62.4 105 36.2
Aqoxy3G01893 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.2e-08 62.0 104 36.5
Aqoxy7G01775 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.2e-08 62.0 101 33.7
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.2e-08 62.0 102 36.3
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-07 61.6 102 35.3
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 1.1e-07 61.6 147 28.6
Nitab4.5_0002346g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-07 61.6 102 38.2
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-07 61.2 101 35.6
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-07 61.2 108 33.3
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.4e-07 61.2 107 33.6
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.4e-07 61.2 107 33.6
Lj5g0007991 Lotus japonicus HOM05D000151 ORTHO05D000074 1.4e-07 61.2 109 33.9
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-07 61.2 119 32.8
TWI63G0609 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.4e-07 61.2 120 31.7
Dinv28404 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-07 60.8 123 33.3
Lj3g0025043 Lotus japonicus HOM05D000151 ORTHO05D000074 1.8e-07 60.8 109 33.9
MD13G1047500 Malus domestica HOM05D000151 ORTHO05D000074 1.8e-07 60.8 131 29.0
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.8e-07 60.8 103 37.9
Aqoxy2G01395 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-07 60.5 102 33.3
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.4e-07 60.5 130 29.2
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 2.4e-07 60.5 110 38.2
TWI23G0668 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.4e-07 60.5 119 30.3
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.4e-07 60.5 105 37.1
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-07 60.5 107 36.4
Aa31LG3G1210 Aethionema arabicum HOM05D000930 ORTHO05D000748 3.1e-07 60.1 77 37.7
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-07 60.1 104 36.5
FvH4_1g06764 Fragaria vesca HOM05D000151 ORTHO05D000074 3.1e-07 60.1 111 37.8
FvH4_4g26310 Fragaria vesca HOM05D000151 ORTHO05D000074 3.1e-07 60.1 127 29.1
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.1e-07 60.1 107 35.5
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 3.1e-07 60.1 81 43.2
Sp6g38430 Schrenkiella parvula HOM05D000930 ORTHO05D000748 3.1e-07 60.1 110 30.9
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 4.1e-07 59.7 224 26.8
MD13G1075200 Malus domestica HOM05D000151 ORTHO05D000074 4.1e-07 59.7 106 30.2
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 4.1e-07 59.7 82 41.5
PGR042G0362 Punica granatum HOM05D000151 ORTHO05D000074 4.1e-07 59.7 94 34.0
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 4.1e-07 59.7 124 33.1
FvH4_2g19380 Fragaria vesca HOM05D000151 ORTHO05D000074 5.3e-07 59.3 114 31.6
FAN15G1730 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.3e-07 59.3 114 31.6
Gohir.A06G000900 Gossypium hirsutum HOM05D000151 ORTHO05D000074 5.3e-07 59.3 131 32.1
Gorai.010G001100 Gossypium raimondii HOM05D000151 ORTHO05D000074 5.3e-07 59.3 131 32.1
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 5.3e-07 59.3 109 33.0
Aqoxy2G01392 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.9e-07 58.9 114 31.6
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 6.9e-07 58.9 112 35.7
FvH4_2g19460 Fragaria vesca HOM05D000151 ORTHO05D000074 6.9e-07 58.9 114 31.6
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 6.9e-07 58.9 130 28.5
QL01p024159 Quercus lobata HOM05D000151 ORTHO05D000074 6.9e-07 58.9 90 36.7
QL11p010874 Quercus lobata HOM05D000151 ORTHO05D000074 6.9e-07 58.9 109 35.8
Aqoxy6G02649 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.0e-07 58.5 91 37.4
EL10Ac1g02048 Beta vulgaris HOM05D000151 ORTHO05D000074 9.0e-07 58.5 110 32.7
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 9.0e-07 58.5 131 31.3
FAN23G0760 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-07 58.5 100 31.0
RcHm_v2.0_Chr6g0277851 Rosa chinensis HOM05D000151 ORTHO05D000074 9.0e-07 58.5 155 28.4
Thecc.03G275800 Theobroma cacao HOM05D000151 ORTHO05D000074 9.0e-07 58.5 110 31.8
Aqoxy7G04174 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-06 58.2 89 34.8
Cfa016448 Carpinus fangiana HOM05D015779 ORTHO05D000074 1.2e-06 58.2 117 32.5
AUR62004681 Chenopodium quinoa HOM05D002421 ORTHO05D002560 1.2e-06 58.2 84 38.1
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.2e-06 58.2 105 35.2
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 1.2e-06 58.2 93 35.5
Peaxi162Scf00089g01849 Petunia axillaris HOM05D000151 ORTHO05D000074 1.2e-06 58.2 127 30.7
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 1.2e-06 58.2 115 30.4
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 1.2e-06 58.2 108 37.0
TWI14G1327 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.2e-06 58.2 110 31.8
TWI23G1227 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.2e-06 58.2 108 31.5
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.5e-06 57.8 127 29.9
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 107 31.8
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.5e-06 57.8 107 31.8
MD10G1043600 Malus domestica HOM05D000151 ORTHO05D000074 1.5e-06 57.8 130 33.1
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 1.5e-06 57.8 104 32.7
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 1.5e-06 57.8 104 32.7
Peaxi162Scf00017g00215 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-06 57.8 129 33.3
Peaxi162Scf00089g00166 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-06 57.8 124 33.9
Rhsim02G0225300 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.5e-06 57.8 107 35.5
PGSC0003DMG400018156 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 83 38.6
Atru.chr13.193 Acer truncatum HOM05D000151 ORTHO05D000074 2.0e-06 57.4 105 36.2
CAN.G760.4 Capsicum annuum HOM05D007685 ORTHO05D009136 2.0e-06 57.4 113 33.6
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-06 57.4 102 31.4
MD10G1231500 Malus domestica HOM05D000151 ORTHO05D000074 2.0e-06 57.4 92 30.4
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 2.0e-06 57.4 109 29.4
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 2.0e-06 57.4 105 34.3
Rhsim09G0042100 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.0e-06 57.4 107 35.5
PGSC0003DMG400009857 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.0e-06 57.4 102 32.4
PGSC0003DMG400018077 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.0e-06 57.4 102 32.4
Aa31LG3G1170 Aethionema arabicum HOM05D000930 ORTHO05D000748 2.6e-06 57.0 75 36.0
Aqoxy2G00530 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-06 57.0 91 33.0
Aqoxy2G03786 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-06 57.0 107 29.0
Aqoxy4G02688 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-06 57.0 106 34.0
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.6e-06 57.0 111 30.6
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 2.6e-06 57.0 86 38.4
FvH4_4g02770 Fragaria vesca HOM05D000151 ORTHO05D000074 2.6e-06 57.0 126 29.4
FvH4_4g30040 Fragaria vesca HOM05D000151 ORTHO05D000074 2.6e-06 57.0 120 29.2
FAN07G0146 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-06 57.0 119 29.4
FAN12G2137 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-06 57.0 120 29.2
FAN17G2430 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-06 57.0 119 29.4
Rhsim02G0226200 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.6e-06 57.0 108 35.2
PGSC0003DMG400043406 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.6e-06 57.0 84 40.5
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-06 57.0 149 31.5
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.4e-06 56.6 109 31.2
AUR62024830 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.4e-06 56.6 91 33.0
Dinv28490 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-06 56.6 117 29.1
FAN26G0624 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.4e-06 56.6 100 30.0
Nitab4.5_0003173g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.4e-06 56.6 102 36.3
Rhsim02G0225100 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.4e-06 56.6 107 35.5
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 3.4e-06 56.6 85 35.3
TWI23G0794 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.4e-06 56.6 108 30.6
TWI56G0115 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.4e-06 56.6 105 38.1
Aqoxy2G03780 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.5e-06 56.2 109 29.4
CAN.G1166.23 Capsicum annuum HOM05D000151 ORTHO05D000074 4.5e-06 56.2 103 35.0
FvH4_1g04440 Fragaria vesca HOM05D000151 ORTHO05D000074 4.5e-06 56.2 79 34.2
Hma1.2p1_0548F.1_g176680 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.5e-06 56.2 106 32.1
PSO210G7353 Papaver somniferum HOM05D000151 ORTHO05D000074 4.5e-06 56.2 105 33.3
PGSC0003DMG400018087 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.5e-06 56.2 83 39.8
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.9e-06 55.8 88 37.5
CAN.G1305.8 Capsicum annuum HOM05D000151 ORTHO05D000074 5.9e-06 55.8 102 33.3
CAN.G338.37 Capsicum annuum HOM05D000151 ORTHO05D000074 5.9e-06 55.8 105 35.2
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.9e-06 55.8 96 37.5
Cfa016450 Carpinus fangiana HOM05D015779 ORTHO05D000074 5.9e-06 55.8 68 42.6
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 5.9e-06 55.8 103 34.0
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.9e-06 55.8 88 39.8
FAN15G2038 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.9e-06 55.8 114 30.7
Gohir.A06G034400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 5.9e-06 55.8 131 26.0
Gohir.A13G150700 Gossypium hirsutum HOM05D000151 ORTHO05D000074 5.9e-06 55.8 129 25.6
RcHm_v2.0_Chr7g0224141 Rosa chinensis HOM05D000151 ORTHO05D000074 5.9e-06 55.8 152 29.6
TWI23G0906 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.9e-06 55.8 97 34.0
AT4G16080 Arabidopsis thaliana HOM05D000930 ORTHO05D000748 7.7e-06 55.5 96 34.4
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 7.7e-06 55.5 102 31.4
Cc08_g14380 Coffea canephora HOM05D000151 ORTHO05D000074 7.7e-06 55.5 87 41.4
Haze_06933 Corylus avellana HOM05D000151 ORTHO05D000074 7.7e-06 55.5 112 33.0
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 7.7e-06 55.5 105 34.3
FAN19G0371 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.7e-06 55.5 80 33.8
Peaxi162Scf00329g00017 Petunia axillaris HOM05D000151 ORTHO05D000074 7.7e-06 55.5 75 44.0
Solyc03g113160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 7.7e-06 55.5 102 32.4
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 7.7e-06 55.5 102 32.4
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.7e-06 55.5 112 35.7
Actinidia33181 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.0e-05 55.1 91 34.1
Aa31LG3G4330 Aethionema arabicum HOM05D000930 ORTHO05D000748 1.0e-05 55.1 75 33.3
Aa31LG3G860 Aethionema arabicum HOM05D000930 ORTHO05D000748 1.0e-05 55.1 77 35.1
CAN.G1711.9 Capsicum annuum HOM05D000151 ORTHO05D002065 1.0e-05 55.1 102 33.3
Dinv38983 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-05 55.1 106 37.7
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.0e-05 55.1 115 31.3
Lj2P547T18 Lonicera japonica HOM05D000151 ORTHO05D000074 1.0e-05 55.1 246 24.4
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 1.0e-05 55.1 109 36.7
Prupe.6G184200 Prunus persica HOM05D000151 ORTHO05D000074 1.0e-05 55.1 88 31.8
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-05 55.1 88 35.2
Rhsim02G0223800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.0e-05 55.1 104 31.7
PGSC0003DMG400012285 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.0e-05 55.1 103 33.0
PGSC0003DMG400041939 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.0e-05 55.1 103 37.9
TWI63G1622 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.0e-05 55.1 112 31.2


User provided reference genes

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