Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 1.1e-115 419.9 198 100.0
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 1.6e-93 346.3 197 78.7
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.7e-87 326.2 201 73.6
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 3.8e-87 325.1 201 74.1
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.8e-87 325.1 201 74.1
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 8.4e-87 323.9 201 73.6
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.4e-86 323.2 199 74.4
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 7.1e-86 320.9 199 74.9
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 7.1e-86 320.9 169 84.6
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 6.0e-85 317.8 197 70.6
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 1.7e-84 316.2 199 74.4
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 2.3e-84 315.8 199 73.9
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.3e-84 315.8 198 73.7
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 3.0e-84 315.5 198 73.2
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 8.7e-84 313.9 193 72.0
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 2.5e-83 312.4 201 70.1
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 4.3e-83 311.6 199 72.4
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 7.3e-83 310.8 219 67.6
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 7.3e-83 310.8 200 73.5
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 7.3e-83 310.8 201 70.1
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 9.6e-83 310.5 199 73.4
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 9.6e-83 310.5 197 72.1
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.1e-82 309.3 200 72.0
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 2.8e-82 308.9 199 72.4
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 3.6e-82 308.5 199 71.4
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 8.1e-82 307.4 200 72.5
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 8.1e-82 307.4 200 72.5
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 2.0e-80 302.8 191 72.8
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 2.0e-80 302.8 198 69.7
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 5.8e-80 301.2 194 71.6
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 7.6e-80 300.8 195 70.3
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 1.3e-79 300.1 198 70.7
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.7e-79 299.7 191 71.2
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.7e-79 299.7 191 71.2
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 2.2e-79 299.3 200 69.0
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 1.1e-78 297.0 192 70.3
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 1.4e-78 296.6 195 69.2
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 3.2e-78 295.4 192 69.8
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 7.1e-78 294.3 196 68.4
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 9.3e-78 293.9 192 69.8
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 9.3e-78 293.9 196 67.3
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 2.1e-77 292.7 192 69.8
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.1e-77 292.7 197 66.5
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 2.7e-77 292.4 195 67.7
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 4.6e-77 291.6 201 69.7
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 6.0e-77 291.2 192 68.8
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 2.3e-76 289.3 190 68.4
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 2.3e-76 289.3 192 68.2
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 2.3e-76 289.3 192 67.7
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 3.0e-76 288.9 197 66.5
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 6.6e-76 287.7 193 67.4
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 8.7e-76 287.3 195 66.7
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 8.7e-76 287.3 196 66.3
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.1e-75 287.0 192 68.2
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 5.6e-75 284.6 195 65.6
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 7.3e-75 284.3 195 66.2
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 7.3e-75 284.3 193 67.9
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 1.3e-74 283.5 196 65.8
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.3e-74 283.5 169 74.6
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 1.3e-74 283.5 192 68.2
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 1.6e-74 283.1 166 79.5
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 2.1e-74 282.7 196 66.3
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 2.1e-74 282.7 197 66.5
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 4.8e-74 281.6 195 66.7
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 1.1e-73 280.4 194 64.9
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 5.3e-73 278.1 185 68.6
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 1.2e-72 276.9 193 64.8
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 2.0e-72 276.2 180 70.0
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 5.8e-72 274.6 193 64.2
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 7.6e-72 274.2 193 64.2
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 7.6e-72 274.2 193 64.2
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 9.9e-72 273.9 191 65.4
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 1.7e-71 273.1 196 64.8
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 2.2e-71 272.7 166 76.5
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 2.9e-71 272.3 198 65.7
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 3.2e-70 268.9 194 62.4
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 4.2e-70 268.5 194 65.5
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 3.5e-69 265.4 191 63.9
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 7.9e-69 264.2 198 62.1
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 2.5e-67 259.2 197 60.4
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 5.6e-67 258.1 165 71.5
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 7.4e-67 257.7 195 59.5
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 3.7e-66 255.4 156 74.4
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.4e-65 253.4 197 59.4
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 3.4e-64 248.8 198 54.5
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 2.9e-63 245.7 167 67.1
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 2.9e-63 245.7 192 58.3
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 4.2e-62 241.9 166 71.7
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 9.3e-62 240.7 195 59.0
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.6e-61 240.0 166 66.9
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 3.5e-61 238.8 184 61.4
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 5.7e-59 231.5 195 57.4
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 6.3e-58 228.0 193 58.5
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 2.4e-57 226.1 215 51.6
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 1.1e-54 217.2 205 51.2
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.0e-52 210.7 199 49.2
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 1.8e-52 209.9 195 51.8
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 8.7e-52 207.6 194 45.9
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.5e-51 206.1 133 68.4
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.5e-51 206.1 133 68.4
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.3e-50 203.8 194 52.1
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 8.2e-50 201.1 132 65.9
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 4.2e-46 188.7 173 54.9
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 7.2e-46 188.0 192 49.5
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 1.5e-43 180.3 104 77.9
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 6.3e-42 174.9 92 85.9
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 3.2e-38 162.5 215 40.5
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 5.7e-35 151.8 92 75.0
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.2e-32 144.1 81 81.5
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 3.5e-32 142.5 271 34.7
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 5.2e-28 128.6 111 55.0
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 2.4e-25 119.8 184 35.3
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 9.1e-25 117.9 71 73.2
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 3.8e-23 112.5 110 50.9
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 4.5e-16 89.0 75 57.3
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 5.9e-16 88.6 229 29.3
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 5.9e-16 88.6 53 73.6
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 8.5e-15 84.7 137 34.3
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 8.5e-15 84.7 68 60.3
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 8.0e-13 78.2 47 80.9
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.2e-11 74.3 62 59.7


User provided reference genes

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