Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 759 100.0
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1308.9 759 86.8
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1300.8 759 87.1
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1277.3 756 85.2
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1227.2 758 82.1
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1144.4 759 75.6
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1144.0 755 76.3
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1137.1 766 74.8
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1132.9 759 74.0
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1132.5 754 74.8
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1120.1 754 74.9
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1120.1 757 73.1
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1117.4 754 72.1
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1115.1 754 72.1
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1113.6 756 73.0
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1112.4 756 74.1
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1108.2 757 74.5
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1107.4 754 71.6
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1107.0 754 73.3
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1105.1 754 74.0
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1104.7 756 72.1
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1104.0 756 72.8
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1103.2 755 73.9
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1102.8 756 72.4
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1102.0 755 73.2
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1102.0 754 72.7
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1097.0 754 72.9
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1096.6 757 72.1
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1096.3 756 71.7
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1095.5 755 71.5
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1094.3 756 71.4
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1094.3 760 71.7
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1094.0 755 71.0
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1092.0 754 73.1
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1092.0 755 71.7
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1090.1 758 70.6
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1089.7 754 70.8
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1088.9 755 71.1
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1080.9 755 72.6
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1079.3 755 71.7
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1079.3 755 71.5
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1078.5 759 70.5
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 5.2e-312 1074.7 755 71.1
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 1.0e-311 1072.8 753 70.9
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 1.6e-311 1072.4 749 72.4
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 3.6e-311 1071.2 755 72.2
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 6.2e-311 1070.5 756 70.1
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 3.9e-310 1067.8 757 71.1
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 2.5e-309 1065.1 763 69.9
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 8.2e-308 1060.1 760 69.1
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 1.4e-307 1059.3 755 70.6
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 2.4e-307 1058.5 751 69.5
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 6.9e-307 1057.0 755 71.0
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 9.1e-307 1056.6 758 69.1
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 1.2e-306 1056.2 754 69.2
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 5.9e-306 1053.9 758 70.1
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 7.7e-306 1053.5 755 70.6
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 1.4e-304 1049.3 752 69.3
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 1.9e-304 1048.9 757 68.0
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 3.6e-303 1044.6 756 69.6
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 3.9e-302 1041.2 744 71.6
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 2.6e-301 1038.5 755 70.3
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 4.4e-301 1037.7 787 66.8
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 4.4e-301 1037.7 752 69.0
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 5.7e-301 1037.3 754 69.2
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 5.7e-301 1037.3 752 68.9
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 1.7e-300 1035.8 759 68.8
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 2.8e-300 1035.0 759 68.5
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 6.3e-300 1033.9 754 69.5
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 4.1e-299 1031.2 752 68.4
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 1.5e-298 1029.2 759 68.4
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 1.7e-297 1025.8 756 67.5
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 1.7e-297 1025.8 755 66.9
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 2.2e-297 1025.4 755 68.9
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 3.8e-297 1024.6 748 67.8
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 7.2e-296 1020.4 754 69.0
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 9.4e-296 1020.0 754 68.3
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 9.4e-296 1020.0 755 67.3
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 1.2e-295 1019.6 756 67.1
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 2.1e-295 1018.8 755 69.5
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 4.7e-295 1017.7 746 68.4
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 1.8e-294 1015.8 756 66.7
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 2.0e-293 1012.3 756 66.4
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 7.4e-293 1010.4 754 69.5
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 2.6e-290 1001.9 720 70.1
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 7.7e-290 1000.3 715 70.8
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 1.1e-288 996.5 746 69.6
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 1.0e-286 989.9 755 67.4
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.3e-285 984.9 758 68.2
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 2.2e-281 972.2 756 65.2
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 3.4e-277 958.4 757 64.5
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 8.6e-273 943.7 758 61.7
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 4.7e-271 937.9 755 60.9
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 8.0e-271 937.2 757 61.4
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 1.0e-270 936.8 765 64.6
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 2.5e-264 915.6 755 60.1
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 4.7e-255 884.8 791 58.5
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 2.1e-234 816.2 717 59.4
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 2.2e-228 796.2 584 70.5
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 5.6e-208 728.4 538 68.4
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.4e-193 680.6 761 47.3
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 2.5e-179 633.3 655 53.7
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 1.0e-177 627.9 764 46.2
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 8.5e-172 608.2 753 51.1
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 4.8e-167 592.4 773 43.1
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 5.7e-160 568.9 401 71.6
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 5.4e-134 482.6 1004 34.5
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 2.1e-114 417.5 295 70.2
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 1.4e-65 255.4 187 64.2
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 6.8e-52 209.9 164 65.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 1.3e-15 89.4 65 60.0
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 2.9e-10 71.6 219 26.5
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.7e-10 71.2 43 72.1
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.7e-10 71.2 43 72.1
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.1e-09 69.7 46 69.6
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 3.0e-07 61.6 60 48.3
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 3.9e-07 61.2 60 48.3
SMO361G0266 Selaginella moellendorffii HOM05D006425 ORTHO05D007312 3.3e-06 58.2 97 38.1


User provided reference genes

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