Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 3.0e-122 441.8 218 100.0
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.6e-81 305.8 224 71.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.9e-80 302.4 221 71.5
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 4.6e-78 295.0 214 70.6
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.1e-74 283.9 216 69.4
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 4.0e-74 282.0 215 66.0
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 2.0e-73 279.6 219 65.8
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 2.6e-73 279.3 215 65.6
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 4.4e-73 278.5 224 64.3
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 4.4e-73 278.5 219 65.3
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 9.9e-73 277.3 221 65.6
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.3e-72 276.9 217 65.4
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.7e-72 276.6 224 64.3
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 2.2e-72 276.2 222 64.4
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.9e-72 275.8 217 64.5
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 6.4e-72 274.6 219 64.8
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.4e-71 273.5 219 63.5
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.9e-71 273.1 217 65.0
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 2.4e-71 272.7 214 62.6
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.2e-71 272.3 218 64.7
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 4.2e-71 271.9 219 62.1
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 9.3e-71 270.8 218 64.2
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 9.3e-71 270.8 216 62.5
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.2e-70 270.4 218 62.8
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 2.1e-70 269.6 219 64.4
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.7e-70 269.2 214 65.9
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.5e-70 268.9 210 64.8
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 4.6e-70 268.5 214 62.6
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 6.0e-70 268.1 215 65.6
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 6.0e-70 268.1 221 61.5
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 7.8e-70 267.7 216 62.0
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 7.8e-70 267.7 225 63.6
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.0e-69 267.3 214 63.1
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.3e-69 266.9 214 65.0
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.7e-69 266.5 218 63.3
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 3.0e-69 265.8 225 61.8
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 3.9e-69 265.4 174 73.0
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 6.6e-69 264.6 214 62.6
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 8.7e-69 264.2 217 64.1
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 8.7e-69 264.2 221 62.9
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.5e-68 263.5 223 60.1
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.9e-68 263.1 219 62.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.9e-68 263.1 216 62.5
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 3.3e-68 262.3 218 62.4
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 3.3e-68 262.3 173 71.7
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 3.3e-68 262.3 247 56.7
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 3.3e-68 262.3 222 62.2
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 4.3e-68 261.9 217 61.3
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 4.3e-68 261.9 216 62.5
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 4.3e-68 261.9 217 64.1
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 4.3e-68 261.9 216 60.6
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 5.6e-68 261.5 222 63.1
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.3e-67 260.4 217 61.8
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-67 260.0 214 62.6
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.6e-67 260.0 222 61.7
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 2.1e-67 259.6 220 60.5
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 3.6e-67 258.8 221 59.7
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 6.2e-67 258.1 220 59.5
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 2.4e-66 256.1 223 60.5
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.4e-66 256.1 244 58.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 6.9e-66 254.6 215 59.1
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 9.0e-66 254.2 226 58.4
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 9.0e-66 254.2 213 61.0
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 9.0e-66 254.2 170 72.9
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.0e-65 253.1 221 60.2
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 4.9e-64 248.4 144 79.2
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.1e-63 247.3 142 80.3
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.4e-63 246.9 174 69.0
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.9e-63 246.5 147 78.2
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.4e-63 246.1 166 68.7
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 3.2e-63 245.7 213 60.6
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 5.4e-63 245.0 215 61.9
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 9.3e-63 244.2 204 60.8
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.6e-62 243.4 163 71.8
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.7e-62 242.7 244 55.3
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 4.6e-62 241.9 143 78.3
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.0e-61 240.7 217 57.6
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 3.9e-61 238.8 190 64.2
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 6.7e-61 238.0 212 59.9
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 6.7e-61 238.0 216 58.8
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.5e-60 236.9 142 76.1
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.9e-60 236.5 142 76.8
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.9e-60 236.5 209 60.8
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 3.3e-60 235.7 218 57.8
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 3.3e-60 235.7 218 57.8
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 7.4e-60 234.6 163 68.1
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 7.4e-60 234.6 163 68.1
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.3e-59 233.8 158 70.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.6e-59 233.4 215 54.9
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.1e-59 233.0 217 57.1
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 2.1e-59 233.0 163 66.9
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 3.6e-59 232.3 221 55.7
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 8.1e-59 231.1 162 67.9
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.1e-58 230.7 209 56.5
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.1e-58 230.7 168 66.7
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 3.1e-58 229.2 208 57.2
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 5.3e-58 228.4 212 57.1
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 3.4e-57 225.7 206 59.2
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 3.8e-56 222.2 145 70.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 3.9e-53 212.2 162 65.4
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 5.1e-53 211.8 140 70.0
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.5e-52 210.3 156 65.4
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 3.7e-51 205.7 118 83.1
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 1.5e-49 200.3 119 76.5
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 2.0e-49 199.9 118 77.1
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.2e-46 190.7 159 59.1
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 8.7e-45 184.5 173 57.2
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.3e-43 180.6 190 52.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-43 180.3 225 49.8
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 6.9e-42 174.9 170 53.5
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 9.0e-42 174.5 137 60.6
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.5e-41 173.7 218 48.6
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 6.5e-40 168.3 185 48.1
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 2.7e-38 162.9 170 52.4
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.9e-32 142.9 142 53.5
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.3e-29 133.3 133 48.9
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.1e-23 114.4 63 82.5
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.9e-23 113.6 83 62.7
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 9.4e-23 111.3 74 66.2
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 9.7e-20 101.3 56 76.8
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 1.9e-07 60.5 62 53.2


User provided reference genes

Program Settings