Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00215 Beta vulgaris HOM05D000846 ORTHO05D006755 3.1e-57 224.9 117 100.0
EL10Ac5g11125 Beta vulgaris HOM05D000846 ORTHO05D006755 1.0e-55 219.9 117 97.4
EL10Ac6g13093 Beta vulgaris HOM05D000846 ORTHO05D006755 8.3e-42 173.7 91 98.9
Lsat_1_v5_gn_9_118641 Lactuca sativa HOM05D000846 ORTHO05D006755 3.1e-41 171.8 91 96.7
Hund15507 Selenicereus undatus HOM05D000846 ORTHO05D006755 4.1e-41 171.4 91 96.7
Peaxi162Scf00011g00530 Petunia axillaris HOM05D000846 ORTHO05D006755 5.4e-41 171.0 91 95.6
Peaxi162Scf00017g02641 Petunia axillaris HOM05D000846 ORTHO05D006755 5.4e-41 171.0 91 95.6
Cc02_g22620 Coffea canephora HOM05D000846 ORTHO05D006755 9.1e-41 170.2 91 95.6
Migut.B00826 Erythranthe guttata HOM05D000846 ORTHO05D006755 1.2e-40 169.9 91 95.6
vmacro19885 Vaccinium macrocarpon HOM05D000846 ORTHO05D006755 1.2e-40 169.9 91 94.5
ECA240G4115 Erigeron canadensis HOM05D000846 ORTHO05D006755 1.6e-40 169.5 91 94.5
HanXRQChr03g0073611 Helianthus annuus HOM05D000846 ORTHO05D006755 1.6e-40 169.5 91 94.5
CAN.G798.7 Capsicum annuum HOM05D000846 ORTHO05D006755 2.0e-40 169.1 91 93.4
DCAR_001823 Daucus carota HOM05D000846 ORTHO05D006755 2.0e-40 169.1 91 94.5
Nitab4.5_0000816g0070 Nicotiana tabacum HOM05D000846 ORTHO05D006755 2.0e-40 169.1 91 93.4
Nitab4.5_0010336g0020 Nicotiana tabacum HOM05D000846 ORTHO05D006755 2.0e-40 169.1 91 93.4
Oeu008902.1 Olea europaea HOM05D000846 ORTHO05D006755 2.0e-40 169.1 91 94.5
MSTRG.16514 Avicennia marina HOM05D000846 ORTHO05D006755 3.5e-40 168.3 91 93.4
SGA_v2.0_scaffold110G31332 Striga asiatica HOM05D000846 ORTHO05D006755 3.5e-40 168.3 91 93.4
CSS0000492 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 5.9e-40 167.5 91 92.3
Rhsim05G0119700 Rhododendron simsii HOM05D000846 ORTHO05D006755 5.9e-40 167.5 91 92.3
Sc07g0004850 Simmondsia chinensis HOM05D000846 ORTHO05D006755 5.9e-40 167.5 91 93.4
Ciclev10030583m.g Citrus clementina HOM05D000846 ORTHO05D006755 7.7e-40 167.2 91 94.5
Dinv19375 Davidia involucrata HOM05D000846 ORTHO05D006755 7.7e-40 167.2 91 93.4
PSO170G2918 Papaver somniferum HOM05D000846 ORTHO05D006755 1.0e-39 166.8 91 91.2
Ah.03g132090 Amaranthus hybridus HOM05D000846 ORTHO05D006755 1.3e-39 166.4 91 92.3
Solyc01g104070.3 Solanum lycopersicum HOM05D000846 ORTHO05D006755 1.3e-39 166.4 91 92.3
PGSC0003DMG400023766 Solanum tuberosum HOM05D000846 ORTHO05D006755 1.3e-39 166.4 91 92.3
Medtr2g006750 Medicago truncatula HOM05D000846 ORTHO05D006755 1.7e-39 166.0 91 90.1
Sopen01g046480 Solanum pennellii HOM05D000846 ORTHO05D006755 1.7e-39 166.0 91 92.3
TPR.G8979 Trifolium pratense HOM05D000846 ORTHO05D006755 1.7e-39 166.0 91 90.1
FvH4_5g29150 Fragaria vesca HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 93.4
FAN04G0084 Fragaria x ananassa HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 93.4
FAN08G3691 Fragaria x ananassa HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 93.4
FAN13G1889 Fragaria x ananassa HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 93.4
FAN18G2713 Fragaria x ananassa HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 93.4
Nn5g28327 Nelumbo nucifera HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 92.3
RcHm_v2.0_Chr7g0221821 Rosa chinensis HOM05D000846 ORTHO05D006755 2.3e-39 165.6 91 93.4
Nn1g08833 Nelumbo nucifera HOM05D000846 ORTHO05D006755 2.9e-39 165.2 91 91.2
TAR381G0552 Trochodendron aralioides HOM05D000846 ORTHO05D006755 2.9e-39 165.2 91 91.2
GSVIVG01022879001 Vitis vinifera HOM05D000846 ORTHO05D006755 2.9e-39 165.2 91 90.1
AUR62026329 Chenopodium quinoa HOM05D000846 ORTHO05D006755 3.8e-39 164.9 91 91.2
MD08G1234100 Malus domestica HOM05D000846 ORTHO05D006755 3.8e-39 164.9 91 92.3
Prupe.1G571100 Prunus persica HOM05D000846 ORTHO05D006755 3.8e-39 164.9 91 92.3
Glyma.15G046000 Glycine max HOM05D000846 ORTHO05D006755 5.0e-39 164.5 91 91.2
Sed0025663 Sechium edule HOM05D000846 ORTHO05D006755 5.0e-39 164.5 91 92.3
Gohir.A05G308500 Gossypium hirsutum HOM05D000846 ORTHO05D006755 6.6e-39 164.1 91 91.2
Gohir.D05G309200 Gossypium hirsutum HOM05D000846 ORTHO05D006755 6.6e-39 164.1 91 91.2
Gorai.009G329500 Gossypium raimondii HOM05D000846 ORTHO05D006755 6.6e-39 164.1 91 91.2
Atru.chr11.1221 Acer truncatum HOM05D000846 ORTHO05D006755 8.6e-39 163.7 91 91.2
Cfa005511 Carpinus fangiana HOM05D000846 ORTHO05D006755 1.1e-38 163.3 91 91.2
Haze_01711 Corylus avellana HOM05D000846 ORTHO05D006755 1.1e-38 163.3 91 91.2
MD15G1425400 Malus domestica HOM05D000846 ORTHO05D006755 1.1e-38 163.3 91 92.3
Phvul.006G215200 Phaseolus vulgaris HOM05D000846 ORTHO05D006755 1.1e-38 163.3 91 90.1
VMungo0540G0381 Vigna mungo HOM05D000846 ORTHO05D006755 1.1e-38 163.3 91 90.1
Cpa.g.sc39.49 Carica papaya HOM05D000846 ORTHO05D006755 1.5e-38 162.9 91 91.2
CiPaw.06G146600 Carya illinoinensis HOM05D000846 ORTHO05D006755 1.5e-38 162.9 91 91.2
Duzib251G0663 Durio zibethinus HOM05D000846 ORTHO05D006755 1.5e-38 162.9 91 90.1
QL02p099167 Quercus lobata HOM05D000846 ORTHO05D006755 1.5e-38 162.9 91 91.2
COL.COLO4_27511 Corchorus olitorius HOM05D000846 ORTHO05D006755 1.9e-38 162.5 91 90.1
Manes.03G080600 Manihot esculenta HOM05D000846 ORTHO05D006755 1.9e-38 162.5 91 91.2
Glyma.08G187000 Glycine max HOM05D000846 ORTHO05D006755 2.5e-38 162.2 91 90.1
Lalb_Chr20g0123491 Lupinus albus HOM05D000846 ORTHO05D006755 2.5e-38 162.2 91 89.0
MELO3C019464.2 Cucumis melo HOM05D000846 ORTHO05D006755 3.3e-38 161.8 91 90.1
CsaV3_3G019110 Cucumis sativus L. HOM05D000846 ORTHO05D006755 3.3e-38 161.8 91 90.1
Eucgr.I02730 Eucalyptus grandis HOM05D000846 ORTHO05D006755 3.3e-38 161.8 91 90.1
Thecc.02G295900 Theobroma cacao HOM05D000846 ORTHO05D006755 4.2e-38 161.4 91 90.1
Lj6g0026631 Lotus japonicus HOM05D000846 ORTHO05D006755 7.2e-38 160.6 91 87.9
Potri.008G085800 Populus trichocarpa HOM05D000846 ORTHO05D006755 7.2e-38 160.6 91 90.1
CARHR235340 Cardamine hirsuta HOM05D000846 ORTHO05D006755 9.5e-38 160.2 91 90.1
AUR62026527 Chenopodium quinoa HOM05D000846 ORTHO05D006755 9.5e-38 160.2 91 87.9
unitig_21.g20912 Utricularia gibba HOM05D000846 ORTHO05D006755 9.5e-38 160.2 91 90.1
AL7G25080 Arabidopsis lyrata HOM05D000846 ORTHO05D006755 1.6e-37 159.5 91 90.1
AT4G27640 Arabidopsis thaliana HOM05D000846 ORTHO05D006755 1.6e-37 159.5 91 90.1
Thhalv10024293m.g Eutrema salsugineum HOM05D000846 ORTHO05D006755 1.6e-37 159.5 91 90.1
PGR142G3343 Punica granatum HOM05D000846 ORTHO05D006755 1.6e-37 159.5 91 89.0
Sp7g25600 Schrenkiella parvula HOM05D000846 ORTHO05D006755 1.6e-37 159.5 91 90.1
Aa31LG9G17870 Aethionema arabicum HOM05D000846 ORTHO05D006755 2.1e-37 159.1 90 91.1
Aqoxy6G00235 Aquilegia oxysepala HOM05D000846 ORTHO05D006755 2.1e-37 159.1 91 87.9
BcaC06g32677 Brassica carinata HOM05D000846 ORTHO05D006755 2.1e-37 159.1 91 89.0
A03p57390 Brassica napus HOM05D000846 ORTHO05D006755 2.1e-37 159.1 91 89.0
Carub.0007s1321 Capsella rubella HOM05D000846 ORTHO05D006755 2.1e-37 159.1 91 89.0
C07p55610 Brassica napus HOM05D000846 ORTHO05D006755 2.8e-37 158.7 91 89.0
BolC7t46041H Brassica oleracea HOM05D000846 ORTHO05D006755 2.8e-37 158.7 91 89.0
BraA03t14805Z Brassica rapa HOM05D000846 ORTHO05D006755 2.8e-37 158.7 91 89.0
Psat1g221240 Pisum sativum HOM05D000846 ORTHO05D006755 3.6e-37 158.3 91 89.0
Potri.010G169800 Populus trichocarpa HOM05D000846 ORTHO05D006755 3.6e-37 158.3 91 87.9
THA.LOC104805711 Tarenaya hassleriana HOM05D000846 ORTHO05D006755 4.7e-37 157.9 91 87.9
BcaC09g50565 Brassica carinata HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
BcaNung01650 Brassica carinata HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
A01p18930 Brassica napus HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
C01p23880 Brassica napus HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
BolC1t02333H Brassica oleracea HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
BraA01t01834Z Brassica rapa HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
ClCG05G009620 Citrullus lanatus HOM05D000846 ORTHO05D006755 6.1e-37 157.5 91 89.0
Sabra10G0129600 Salix brachista HOM05D000846 ORTHO05D006755 1.0e-36 156.8 91 89.0
MBI01_g09375_MAGBIO Magnolia biondii HOM05D000846 ORTHO05D006755 1.8e-36 156.0 91 86.8
EL10As7g23809 Beta vulgaris HOM05D000846 ORTHO05D006755 9.8e-35 150.2 117 73.5
Os03g0261950 Oryza sativa ssp. japonica HOM05D000846 ORTHO05D006755 3.7e-34 148.3 92 79.3
SEGI_41093 Sequoiadendron giganteum HOM05D000846 ORTHO05D006755 6.3e-34 147.5 91 83.5
Ca_00067_v3 Cicer arietinum L. HOM05D000846 ORTHO05D006755 4.1e-33 144.8 78 89.7
ATR0665G276 Amborella trichopoda HOM05D000846 ORTHO05D006755 5.4e-33 144.4 91 78.0
Zm00001eb011450 Zea mays HOM05D000846 ORTHO05D006755 9.2e-33 143.7 91 79.1
PSO528G0036 Papaver somniferum HOM05D000846 ORTHO05D006755 4.5e-32 141.4 75 92.0
Lsat_1_v5_gn_7_78561 Lactuca sativa HOM05D000846 ORTHO05D006755 1.1e-30 136.7 91 74.7
HanXRQChr16g0511911 Helianthus annuus HOM05D000846 ORTHO05D006755 9.5e-30 133.7 91 71.4
ECA236G1359 Erigeron canadensis HOM05D000846 ORTHO05D006755 2.8e-29 132.1 90 73.3
AagrBONN_evm.TU.Sc2ySwM_228.251 Anthoceros agrestis HOM05D000846 ORTHO05D006755 1.5e-27 126.3 88 69.3
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 3.4e-27 125.2 92 71.7
Mapoly0029s0100 Marchantia polymorpha HOM05D000846 ORTHO05D006755 7.8e-24 114.0 86 61.6
Pp3c4_7610 Physcomitrium patens HOM05D000846 ORTHO05D006755 1.0e-23 113.6 87 65.5
CSS0018741 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 1.7e-23 112.8 68 80.9
SMO364G0838 Selaginella moellendorffii HOM05D000846 ORTHO05D006755 2.3e-20 102.4 78 62.8
CBR_g3136 Chara braunii HOM05D000846 ORTHO05D006755 8.3e-18 94.0 80 58.8
Dinv24292 Davidia involucrata HOM05D000846 ORTHO05D006755 7.3e-14 80.9 41 92.7
PRCOL_00005470 Prasinoderma coloniale HOM05D000846 ORTHO05D006755 3.4e-11 72.0 86 46.5
MCO06G140 Micromonas commoda HOM05D000846 ORTHO05D006755 1.1e-09 67.0 86 38.4
Cre12.g490850 Chlamydomonas reinhardtii HOM05D000846 ORTHO05D006755 3.0e-07 58.9 86 39.5


User provided reference genes

Program Settings