Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 0.0e+00 1105.9 598 100.0
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 6.1e-250 867.5 610 74.9
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 2.3e-236 822.4 540 78.1
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 1.1e-214 750.4 609 68.0
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 2.7e-197 692.6 624 62.3
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 6.2e-194 681.4 608 62.3
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 6.5e-191 671.4 617 60.0
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 5.5e-190 668.3 496 69.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.1e-185 654.1 584 65.2
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.8e-185 653.3 632 60.4
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 9.0e-185 651.0 418 78.2
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 3.4e-184 649.0 413 78.5
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.5e-184 648.7 625 58.2
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.0e-183 647.5 616 58.1
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 1.0e-183 647.5 512 65.8
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.3e-183 647.1 542 63.8
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 1.7e-183 646.7 413 77.7
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 2.2e-183 646.4 413 78.2
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 2.2e-183 646.4 641 63.7
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 3.8e-183 645.6 611 61.7
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 3.8e-183 645.6 496 67.3
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 3.2e-182 642.5 420 76.9
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 5.5e-182 641.7 541 67.7
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 7.2e-182 641.3 413 77.2
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.2e-181 640.6 615 59.5
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 2.1e-181 639.8 496 67.9
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 2.7e-181 639.4 624 58.3
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 4.6e-181 638.6 416 76.4
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 6.1e-181 638.3 584 61.8
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.3e-180 637.1 518 66.2
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 1.8e-180 636.7 409 78.2
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.1e-180 635.2 623 58.3
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 1.9e-179 633.3 412 76.7
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 2.5e-179 632.9 415 77.3
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.5e-179 632.9 414 76.6
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 3.3e-179 632.5 616 57.8
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 3.3e-179 632.5 414 76.3
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 4.3e-179 632.1 621 57.5
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 5.7e-179 631.7 413 76.8
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.4e-179 631.3 503 66.2
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 7.4e-179 631.3 623 58.3
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 9.7e-179 630.9 624 57.5
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.6e-178 630.2 623 58.3
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 4.8e-178 628.6 581 59.9
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 6.3e-178 628.2 614 57.8
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 6.3e-178 628.2 602 61.3
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 8.2e-178 627.9 623 57.9
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 8.2e-178 627.9 413 78.0
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.1e-177 627.5 568 62.3
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 2.4e-177 626.3 625 58.2
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.4e-177 626.3 604 61.4
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 3.1e-177 625.9 417 74.1
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 3.1e-177 625.9 567 61.0
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 4.1e-177 625.5 611 57.4
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 5.3e-177 625.2 516 67.2
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.2e-176 624.0 576 59.2
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 1.5e-176 623.6 500 64.8
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 2.0e-176 623.2 412 75.2
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 2.0e-176 623.2 622 57.7
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 4.5e-176 622.1 411 74.9
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 4.5e-176 622.1 419 74.0
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.9e-176 621.7 619 59.6
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 5.9e-176 621.7 419 74.5
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 7.7e-176 621.3 628 57.3
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 7.7e-176 621.3 412 75.2
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 1.0e-175 620.9 610 56.6
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.3e-175 620.5 620 60.0
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.7e-175 620.2 640 56.7
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 2.2e-175 619.8 416 75.7
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 2.9e-175 619.4 492 73.4
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 2.9e-175 619.4 413 74.6
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 3.8e-175 619.0 506 64.6
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 8.5e-175 617.8 412 75.2
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.1e-174 617.5 420 73.1
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.9e-174 616.7 420 73.1
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.9e-174 616.7 611 56.8
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.5e-174 616.3 414 74.9
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 7.2e-174 614.8 406 76.8
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.2e-173 614.0 412 74.0
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.6e-173 613.6 633 60.7
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 4.6e-173 612.1 412 74.5
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 6.1e-173 611.7 389 77.1
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 6.1e-173 611.7 413 73.8
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 6.1e-173 611.7 403 75.4
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.0e-172 610.9 413 73.4
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 2.3e-172 609.8 415 73.5
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 3.0e-172 609.4 407 74.4
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 5.1e-172 608.6 412 74.5
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 5.1e-172 608.6 411 74.7
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 5.1e-172 608.6 589 60.1
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 6.7e-172 608.2 406 75.6
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.8e-172 607.8 408 73.5
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 8.8e-172 607.8 406 75.4
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.1e-171 607.4 406 74.1
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.5e-171 607.1 408 73.5
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 4.3e-171 605.5 412 72.6
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 5.7e-171 605.1 410 75.1
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 5.7e-171 605.1 415 73.7
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.2e-170 603.2 461 68.1
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 2.8e-170 602.8 409 75.1
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 2.8e-170 602.8 412 74.3
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 4.8e-170 602.1 424 71.0
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 4.8e-170 602.1 412 73.1
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 9.1e-169 597.8 507 65.1
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 9.1e-169 597.8 357 81.8
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.2e-168 597.4 406 74.4
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 5.9e-168 595.1 410 71.5
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.2e-167 593.2 411 71.3
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.2e-167 593.2 413 73.4
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 6.5e-167 591.7 414 71.0
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 1.9e-166 590.1 406 71.7
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.2e-166 589.0 407 72.7
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 7.2e-166 588.2 414 70.5
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 1.2e-165 587.4 414 70.3
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 1.6e-165 587.0 414 70.3
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.6e-165 587.0 414 70.3
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 4.7e-165 585.5 408 71.3
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 4.7e-165 585.5 408 71.3
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 1.0e-164 584.3 408 71.1
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-164 584.3 414 70.3
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-164 584.3 408 71.1
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 1.0e-164 584.3 408 71.1
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.4e-164 583.9 407 70.8
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.3e-164 583.2 410 70.5
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 3.0e-164 582.8 414 70.8
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.5e-163 580.5 408 70.8
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.5e-163 580.5 611 54.0
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.2e-162 576.6 415 69.6
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 3.7e-162 575.9 342 82.5
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 2.4e-161 573.2 405 69.9
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 2.4e-161 573.2 386 72.5
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.6e-160 570.5 461 64.2
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.8e-154 548.9 388 70.4
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 4.5e-152 542.3 417 67.9
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 5.7e-147 525.4 374 73.0
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.8e-145 520.4 361 72.0
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 2.1e-141 506.9 392 65.1
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 5.9e-136 488.8 403 62.3
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.3e-134 483.0 389 62.5
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 4.7e-133 479.2 316 72.2
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 8.6e-127 458.4 376 63.6
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 2.1e-125 453.8 361 62.9
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.0e-119 434.9 272 74.3
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 6.6e-95 352.4 384 50.0
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 4.0e-92 343.2 209 76.6
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.3e-87 327.4 407 51.4
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 7.4e-86 322.4 196 76.5
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 2.4e-76 290.8 179 76.0
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 1.0e-71 275.4 193 70.5
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.3e-66 258.5 159 74.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.4e-65 255.0 156 75.6
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.4e-65 255.0 156 75.6
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 5.1e-63 246.5 360 37.8
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.2e-59 235.3 361 40.2
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 3.1e-52 210.7 139 77.0
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 2.0e-51 208.0 181 54.7
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.7e-45 188.3 127 76.4
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.8e-45 187.6 262 37.4
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.2e-37 161.4 185 50.3
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 7.0e-36 156.4 109 69.7
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.7e-34 151.8 110 64.5
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.0e-31 141.0 208 37.0
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.1e-28 132.5 88 69.3
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 7.0e-28 129.8 83 71.1
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 1.0e-26 125.9 83 68.7
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 6.5e-26 123.2 118 55.9
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 2.1e-24 118.2 125 50.4
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 2.3e-23 114.8 99 61.6
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.2e-19 102.4 117 47.0
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 4.4e-14 84.0 173 35.3
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 8.3e-13 79.7 95 46.3
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 3.2e-12 77.8 240 31.7
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 2.5e-09 68.2 87 43.7
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 4.3e-09 67.4 41 75.6
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 3.1e-07 61.2 111 37.8
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 5.2e-07 60.5 39 74.4
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 5.8e-06 57.0 32 81.2


User provided reference genes

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