Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 5.0e-135 484.6 269 100.0
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 5.9e-35 152.1 274 43.1
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 6.1e-24 115.5 202 43.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.0e-23 114.8 239 34.7
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.4e-22 109.8 239 35.6
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 7.5e-22 108.6 238 36.1
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.8e-22 108.2 239 37.7
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 3.7e-21 106.3 236 37.3
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.3e-21 105.1 240 37.1
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.1e-20 104.8 252 36.9
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.4e-20 104.4 235 34.9
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.8e-20 104.0 266 35.7
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.2e-20 103.2 237 35.0
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.2e-20 103.2 234 32.1
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.2e-20 101.7 255 36.5
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 9.2e-20 101.7 236 36.0
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 9.2e-20 101.7 234 35.9
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.2e-19 101.3 251 34.7
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.6e-19 100.9 231 35.9
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.6e-19 100.9 230 34.3
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.0e-18 98.2 244 33.6
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 3.0e-18 96.7 236 33.1
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 3.0e-18 96.7 236 33.1
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 5.0e-18 95.9 236 33.1
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.0e-18 95.9 237 34.6
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 6.6e-18 95.5 212 36.8
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.1e-17 94.7 253 36.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 2.5e-17 93.6 236 33.1
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.5e-17 93.6 237 31.2
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 3.3e-17 93.2 231 33.8
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.3e-17 92.8 238 33.6
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 5.6e-17 92.4 252 34.9
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 7.3e-17 92.0 248 33.5
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.2e-16 91.3 233 34.8
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.1e-16 90.5 236 32.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 3.6e-16 89.7 237 35.4
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 3.6e-16 89.7 234 30.3
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 3.6e-16 89.7 236 33.5
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 6.2e-16 89.0 233 33.0
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.8e-15 87.4 232 32.3
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.2e-15 85.9 237 32.1
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 8.9e-15 85.1 231 32.9
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.2e-14 84.7 254 31.5
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 1.2e-14 84.7 237 32.5
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.0e-14 84.0 198 32.3
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.4e-14 83.2 230 31.7
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 3.4e-14 83.2 270 31.9
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.8e-14 82.4 237 33.3
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 5.8e-14 82.4 252 34.9
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 7.5e-14 82.0 234 32.9
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 9.8e-14 81.6 231 31.6
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.7e-13 80.9 236 31.8
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 2.9e-13 80.1 242 32.6
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.9e-13 80.1 238 31.5
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 3.7e-13 79.7 233 31.8
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 6.4e-13 79.0 254 30.3
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 8.3e-13 78.6 233 34.3
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 8.3e-13 78.6 233 34.3
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 1.1e-12 78.2 235 31.1
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.1e-12 78.2 252 34.9
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 1.4e-12 77.8 257 31.9
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.4e-12 77.0 240 32.5
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 3.2e-12 76.6 233 32.6
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 4.1e-12 76.3 253 30.0
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 4.1e-12 76.3 253 30.0
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 7.0e-12 75.5 230 32.6
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 7.0e-12 75.5 255 32.5
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 9.2e-12 75.1 270 31.1
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 9.2e-12 75.1 253 27.7
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.6e-11 74.3 232 30.2
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.0e-11 73.9 239 30.5
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.7e-11 73.6 232 30.6
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 2.7e-11 73.6 231 31.6
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.7e-11 73.6 234 32.9
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 2.7e-11 73.6 262 29.4
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 7.8e-11 72.0 270 31.1
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.0e-10 71.6 232 29.7
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 1.7e-10 70.9 232 29.7
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 3.0e-10 70.1 232 31.9
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 3.9e-10 69.7 230 31.3
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.9e-10 69.7 231 31.2
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 3.9e-10 69.7 197 32.0
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 3.9e-10 69.7 233 30.9
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 5.0e-10 69.3 216 29.6
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 1.1e-09 68.2 248 29.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-09 68.2 211 30.3
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.9e-09 67.4 247 28.7
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.5e-09 67.0 224 25.9
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 4.3e-09 66.2 236 28.0
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 7.3e-09 65.5 231 27.7
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.2e-08 64.7 236 27.1
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 2.1e-08 63.9 227 30.0
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 3.6e-08 63.2 256 30.9
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.7e-08 62.8 235 30.6
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.1e-07 61.6 234 28.6
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 3.4e-06 56.6 257 28.8
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 4.4e-06 56.2 125 33.6
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 9.9e-06 55.1 243 27.2


User provided reference genes

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