Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 7.7e-49 196.8 99 100.0
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.0e-44 182.2 99 92.9
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 3.7e-43 177.9 100 92.0
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 4.8e-43 177.6 99 90.9
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 3.1e-42 174.9 97 90.7
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 4.1e-42 174.5 97 90.7
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 1.2e-41 172.9 96 92.7
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 1.2e-41 172.9 96 92.7
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 1.6e-41 172.6 96 91.7
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 2.0e-41 172.2 97 90.7
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 2.7e-41 171.8 97 91.8
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 4.5e-41 171.0 94 92.6
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 4.5e-41 171.0 94 92.6
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 4.5e-41 171.0 94 92.6
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 5.9e-41 170.6 94 89.4
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 5.9e-41 170.6 99 89.9
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.0e-40 169.9 100 89.0
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 1.3e-40 169.5 94 91.5
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 1.3e-40 169.5 99 88.9
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 1.7e-40 169.1 93 92.5
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 2.3e-40 168.7 88 94.3
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 2.9e-40 168.3 93 92.5
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 2.9e-40 168.3 88 94.3
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 2.9e-40 168.3 93 92.5
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 2.9e-40 168.3 93 92.5
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 2.9e-40 168.3 88 94.3
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 3.8e-40 167.9 93 92.5
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 3.8e-40 167.9 93 92.5
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 3.8e-40 167.9 93 92.5
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 3.8e-40 167.9 90 92.2
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 3.8e-40 167.9 89 93.3
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 3.8e-40 167.9 89 93.3
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 3.8e-40 167.9 89 93.3
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 5.0e-40 167.5 89 92.1
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 5.0e-40 167.5 89 92.1
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 5.0e-40 167.5 89 92.1
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 5.0e-40 167.5 97 87.6
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 6.5e-40 167.2 89 93.3
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 6.5e-40 167.2 90 91.1
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 6.5e-40 167.2 93 91.4
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 6.5e-40 167.2 94 91.5
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 8.6e-40 166.8 89 93.3
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 8.6e-40 166.8 86 95.3
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 8.6e-40 166.8 97 87.6
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 1.1e-39 166.4 89 93.3
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 1.1e-39 166.4 89 91.0
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 1.1e-39 166.4 87 94.3
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 1.1e-39 166.4 93 91.4
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 1.1e-39 166.4 86 95.3
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 1.1e-39 166.4 87 94.3
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 1.1e-39 166.4 88 94.3
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 1.5e-39 166.0 86 95.3
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 1.5e-39 166.0 87 94.3
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 1.5e-39 166.0 87 94.3
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 1.5e-39 166.0 93 89.2
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 1.9e-39 165.6 87 93.1
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 1.9e-39 165.6 89 93.3
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 1.9e-39 165.6 89 92.1
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 2.5e-39 165.2 87 94.3
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 3.2e-39 164.9 86 93.0
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 3.2e-39 164.9 87 92.0
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 3.2e-39 164.9 85 95.3
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 3.2e-39 164.9 85 95.3
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 3.2e-39 164.9 86 94.2
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 3.2e-39 164.9 93 90.3
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 3.2e-39 164.9 97 86.6
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 94.2
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 4.2e-39 164.5 86 93.0
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 5.5e-39 164.1 87 92.0
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 5.5e-39 164.1 87 92.0
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 5.5e-39 164.1 87 93.1
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 7.2e-39 163.7 87 93.1
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 9.5e-39 163.3 86 91.9
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 9.5e-39 163.3 86 94.2
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 1.2e-38 162.9 85 94.1
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 2.1e-38 162.2 90 92.2
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 2.1e-38 162.2 85 92.9
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 4.7e-38 161.0 82 96.3
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 1.0e-37 159.8 95 87.4
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 1.4e-37 159.5 87 88.5
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 2.3e-37 158.7 84 91.7
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 4.0e-37 157.9 86 88.4
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 8.8e-37 156.8 81 95.1
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 1.2e-36 156.4 86 89.5
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 2.8e-35 151.8 116 70.7
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 3.7e-35 151.4 91 82.4
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.4e-34 149.4 103 76.7
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 1.6e-30 136.0 91 73.6
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 6.1e-30 134.0 70 94.3
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 1.5e-28 129.4 183 47.0
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 2.0e-28 129.0 73 91.8
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 5.7e-28 127.5 69 91.3
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 1.3e-27 126.3 81 80.2
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 1.7e-27 125.9 64 96.9
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 2.4e-26 122.1 64 93.8
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 5.4e-26 120.9 73 86.3
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 2.5e-23 112.1 78 76.9
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 3.1e-21 105.1 61 88.5
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 2.0e-20 102.4 64 82.8
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 4.4e-20 101.3 54 92.6
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 4.9e-19 97.8 62 82.3
Sed0022236 Sechium edule HOM05D005652 ORTHO05D007300 1.1e-18 96.7 90 61.1
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 1.6e-17 92.8 64 76.6
BolC2t09520H Brassica oleracea HOM05D005652 ORTHO05D007300 6.0e-17 90.9 45 93.3
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.3e-16 89.7 50 86.0
AagrBONN_evm.TU.Sc2ySwM_344.240 Anthoceros agrestis HOM05D005652 ORTHO05D007300 2.2e-11 72.4 42 81.0
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 8.6e-08 60.5 32 93.8
Dinv20715 Davidia involucrata HOM05D005652 ORTHO05D185765 5.6e-07 57.8 39 74.4
Actinidia03505 Actinidia chinensis HOM05D005652 ORTHO05D054027 1.2e-06 56.6 75 46.7


User provided reference genes

Program Settings