Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.0e-246 854.7 430 100.0
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 9.4e-192 673.7 435 79.3
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 8.0e-175 617.5 433 71.1
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 6.7e-174 614.4 432 71.8
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 5.7e-173 611.3 433 70.2
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.8e-172 609.0 428 70.6
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 9.1e-171 604.0 429 70.9
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.2e-167 593.6 434 69.8
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 5.2e-166 588.2 437 67.3
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 2.6e-165 585.9 433 68.1
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.7e-164 583.2 433 67.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 6.3e-164 581.3 434 66.8
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 8.3e-164 580.9 433 67.0
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 1.1e-163 580.5 429 70.6
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 1.4e-163 580.1 433 67.4
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 2.4e-163 579.3 433 66.5
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 3.1e-163 578.9 433 66.5
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 2.0e-162 576.2 432 67.6
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 2.7e-162 575.9 432 66.2
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.0e-161 573.9 433 65.8
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 1.3e-161 573.5 454 64.1
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 2.2e-161 572.8 434 66.8
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 2.5e-160 569.3 433 66.3
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 3.2e-160 568.9 429 66.7
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 4.2e-160 568.5 432 66.9
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 5.5e-160 568.2 435 66.7
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 9.4e-160 567.4 435 65.3
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 1.6e-159 566.6 432 65.5
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 6.1e-159 564.7 434 66.8
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 6.1e-159 564.7 439 64.2
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.4e-158 563.5 430 65.3
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 2.3e-158 562.8 433 66.5
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 4.0e-158 562.0 428 64.7
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 2.0e-157 559.7 433 65.8
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 9.8e-157 557.4 427 66.0
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 9.8e-157 557.4 432 65.7
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.3e-156 557.0 434 63.8
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 1.3e-156 557.0 433 64.2
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 1.7e-156 556.6 432 65.7
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.7e-156 556.6 432 65.3
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.2e-156 556.2 433 64.2
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 2.8e-156 555.8 429 64.3
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 2.8e-156 555.8 433 62.8
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 3.7e-156 555.4 431 64.3
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.7e-156 555.4 431 65.4
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 6.3e-156 554.7 429 65.3
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 8.3e-156 554.3 428 65.2
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 8.3e-156 554.3 422 66.1
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.1e-155 553.9 432 63.4
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 3.1e-155 552.4 431 64.0
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 4.1e-155 552.0 437 61.8
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 5.4e-155 551.6 432 64.6
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 9.1e-155 550.8 440 62.3
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 2.0e-154 549.7 434 62.9
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 5.9e-154 548.1 432 64.6
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 7.7e-154 547.7 433 63.7
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 7.7e-154 547.7 433 63.0
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 1.0e-153 547.4 437 62.5
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.0e-153 547.4 436 62.8
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 5.0e-153 545.0 431 64.7
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 8.6e-153 544.3 432 64.4
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.1e-152 543.9 433 62.1
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.5e-152 543.5 433 63.3
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.9e-152 543.1 429 63.4
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.9e-152 543.1 432 64.1
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 9.5e-152 540.8 437 61.3
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 9.5e-152 540.8 429 63.6
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 1.2e-151 540.4 434 61.3
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 2.1e-151 539.7 433 62.8
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.6e-151 538.9 434 61.8
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.1e-151 538.1 428 62.1
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 6.1e-151 538.1 433 63.7
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 4.0e-150 535.4 437 60.4
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 5.2e-150 535.0 434 60.1
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 6.8e-150 534.6 435 61.6
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 7.5e-149 531.2 428 65.7
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.3e-148 530.4 429 62.7
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 4.9e-148 528.5 429 60.1
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 4.9e-148 528.5 429 60.1
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 4.9e-148 528.5 433 63.7
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.4e-147 526.9 459 59.5
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.7e-146 522.7 429 59.4
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.7e-146 522.7 429 59.4
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 8.6e-145 517.7 459 59.5
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.5e-144 516.9 438 61.2
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 3.3e-144 515.8 429 60.8
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.1e-143 513.1 440 61.1
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.4e-142 510.4 438 61.4
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 6.8e-142 508.1 429 61.5
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 1.5e-141 506.9 435 59.3
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 9.8e-141 504.2 433 59.1
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.7e-140 503.4 493 57.0
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 1.3e-137 493.8 437 59.3
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 1.5e-136 490.3 381 63.5
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.3e-136 488.8 361 66.2
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 1.2e-135 487.3 447 57.9
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.7e-135 485.3 343 72.3
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.2e-130 470.7 345 70.1
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 6.6e-129 464.9 341 66.3
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 1.2e-127 460.7 430 57.4
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.0e-126 455.7 355 64.8
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.7e-121 440.3 438 56.6
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 1.2e-119 434.1 433 56.1
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 8.1e-119 431.4 323 66.3
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 5.2e-118 428.7 347 63.4
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 2.1e-114 416.8 300 68.3
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.5e-109 400.6 435 47.6
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.3e-108 397.5 434 48.4
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 6.4e-108 395.2 435 47.6
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 9.3e-107 391.3 433 46.2
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 8.7e-105 384.8 285 70.9
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 4.8e-87 325.9 311 52.4
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 8.4e-84 315.1 453 40.8
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.3e-71 274.6 200 68.0
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 3.7e-71 273.1 266 55.3
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 4.8e-71 272.7 213 62.0
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.2e-69 268.1 328 45.4
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.7e-42 176.4 162 53.7
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.3e-39 168.3 339 33.0
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-31 141.4 202 42.6
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.3e-28 131.7 102 63.7
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 3.6e-26 123.6 116 50.9
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 1.3e-20 105.1 111 45.9
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 3.9e-20 103.6 97 49.5
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 6.6e-20 102.8 68 70.6
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.2e-18 96.3 93 53.8
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 2.5e-11 74.3 62 54.8
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.7e-10 70.1 39 84.6


User provided reference genes

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