Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 2.5e-253 878.2 427 100.0
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 8.0e-111 404.8 243 80.2
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 2.9e-92 343.2 263 64.6
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 7.3e-88 328.6 257 62.3
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 2.1e-87 327.0 261 61.3
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 1.1e-86 324.7 260 61.2
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 1.8e-86 323.9 259 61.4
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 3.1e-86 323.2 259 62.2
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 1.5e-85 320.9 255 62.4
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.5e-85 320.9 255 64.7
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 2.0e-85 320.5 271 61.3
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 2.0e-85 320.5 261 60.9
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.3e-84 317.8 261 60.2
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.3e-84 317.8 260 60.8
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 6.4e-84 315.5 247 64.4
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 6.4e-84 315.5 266 60.2
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 1.1e-83 314.7 255 62.7
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 1.9e-83 313.9 264 59.5
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 2.4e-83 313.5 250 64.0
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 3.2e-83 313.2 265 60.0
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 3.2e-83 313.2 254 61.0
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 5.4e-83 312.4 256 60.2
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 7.1e-83 312.0 260 60.4
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 7.1e-83 312.0 256 59.8
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 7.1e-83 312.0 256 59.8
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 9.3e-83 311.6 260 59.6
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 2.1e-82 310.5 217 71.9
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 4.6e-82 309.3 255 58.4
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 6.0e-82 308.9 248 62.5
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 6.0e-82 308.9 260 59.6
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 7.8e-82 308.5 264 61.4
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 1.3e-81 307.8 246 61.8
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 1.7e-81 307.4 263 57.8
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 1.7e-81 307.4 263 57.8
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 3.0e-81 306.6 258 58.1
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 3.0e-81 306.6 254 60.2
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 3.0e-81 306.6 255 58.4
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 3.9e-81 306.2 266 58.3
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 5.1e-81 305.8 263 58.6
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 1.1e-80 304.7 260 59.6
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 1.9e-80 303.9 247 63.2
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.9e-80 303.9 259 57.1
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 1.9e-80 303.9 262 57.3
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 3.3e-80 303.1 262 57.6
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 4.3e-80 302.8 241 63.1
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 4.3e-80 302.8 264 56.8
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 7.3e-80 302.0 260 57.3
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 7.3e-80 302.0 246 60.6
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.3e-79 301.2 248 59.7
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.1e-79 300.4 242 59.5
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 3.6e-79 299.7 244 62.3
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 8.1e-79 298.5 252 58.3
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 1.4e-78 297.7 245 60.0
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 1.8e-78 297.4 278 55.8
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 3.1e-78 296.6 245 61.2
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 3.1e-78 296.6 268 58.2
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 5.3e-78 295.8 252 59.1
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 1.5e-77 294.3 201 70.1
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 2.6e-77 293.5 245 60.8
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 2.2e-76 290.4 253 55.7
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 2.9e-76 290.0 256 57.8
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 6.4e-76 288.9 266 54.5
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.4e-75 287.7 294 51.7
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 1.9e-75 287.3 241 60.2
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 7.1e-75 285.4 221 63.8
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 2.3e-73 280.4 220 62.7
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 3.0e-73 280.0 226 64.6
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 3.9e-73 279.6 251 55.4
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 8.7e-73 278.5 257 55.3
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 3.3e-72 276.6 199 65.8
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 6.2e-71 272.3 317 47.3
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 5.3e-70 269.2 269 54.3
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 6.9e-70 268.9 193 67.4
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 9.0e-70 268.5 278 50.7
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 4.5e-69 266.2 258 51.6
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 1.7e-68 264.2 256 54.3
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 2.2e-68 263.8 212 59.9
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 2.5e-67 260.4 250 55.6
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 1.6e-66 257.7 183 67.2
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 2.1e-66 257.3 184 67.9
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 3.9e-65 253.1 261 48.7
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 4.0e-62 243.0 250 52.0
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 5.8e-61 239.2 255 47.5
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.2e-58 231.5 245 51.0
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.1e-56 224.9 282 47.2
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 1.9e-56 224.2 193 59.1
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 2.8e-55 220.3 258 46.5
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 3.7e-55 219.9 192 58.3
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 6.3e-55 219.2 197 54.8
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.8e-54 217.6 147 66.7
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.5e-53 214.5 197 58.4
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.7e-52 211.1 245 48.2
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 8.8e-49 198.7 191 54.5
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 2.5e-48 197.2 183 57.9
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 2.5e-48 197.2 256 44.1
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.7e-47 194.5 190 54.7
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 1.3e-44 184.9 320 38.4
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 6.7e-41 172.6 136 64.7
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 8.2e-39 165.6 176 54.0
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 1.9e-35 154.5 151 56.3
ECA248G1705 Erigeron canadensis HOM05D020040 ORTHO05D008805 5.5e-35 152.9 113 69.0
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.2e-34 151.8 160 53.8
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.2e-34 151.8 140 57.9
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 6.1e-34 149.4 163 50.3
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 3.9e-33 146.7 155 52.9
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.8e-30 137.9 234 38.0
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 4.1e-30 136.7 152 49.3
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 5.9e-29 132.9 258 34.9
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 5.0e-28 129.8 105 52.4
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 7.7e-21 105.9 64 71.9
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 5.0e-20 103.2 173 32.9
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 7.2e-19 99.4 65 69.2
ECA248G2350 Erigeron canadensis HOM05D020040 ORTHO05D008805 2.7e-18 97.4 111 46.8
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 3.0e-17 94.0 207 34.3
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 8.8e-17 92.4 179 32.4
ECA248G1058 Erigeron canadensis HOM05D020040 ORTHO05D186320 1.8e-14 84.7 106 42.5
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 1.6e-13 81.6 119 38.7
Aa31LG2G14440 Aethionema arabicum HOM05D007105 ORTHO05D009304 8.9e-09 65.9 236 25.4
ECA248G0093 Erigeron canadensis HOM05D020040 ORTHO05D000004 1.5e-08 65.1 75 44.0
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 2.0e-08 64.7 266 25.6
ECA248G0035 Erigeron canadensis HOM05D020040 ORTHO05D008805 9.8e-08 62.4 77 41.6
ECA240G1325 Erigeron canadensis HOM05D000126 ORTHO05D000085 2.2e-07 61.2 41 80.5
ECA248G1617 Erigeron canadensis HOM05D020040 ORTHO05D187788 2.9e-07 60.8 107 36.4
ECA234G3493 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.4e-06 56.6 127 36.2
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 9.2e-06 55.8 122 31.1


User provided reference genes

Program Settings