Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 0.0e+00 1104.0 577 100.0
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 4.5e-258 894.4 571 84.1
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 5.6e-216 754.6 574 69.2
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 2.8e-215 752.3 574 69.0
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 5.2e-214 748.0 571 68.8
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 9.6e-208 727.2 572 68.4
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 6.2e-207 724.5 576 68.2
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 1.3e-201 706.8 580 66.7
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 3.0e-201 705.7 569 65.9
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 7.3e-200 701.0 567 64.0
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 1.3e-199 700.3 574 64.8
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 2.1e-199 699.5 583 64.0
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 9.0e-198 694.1 582 64.6
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 4.5e-197 691.8 573 64.9
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 5.8e-197 691.4 609 63.7
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 1.3e-196 690.3 570 64.2
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 3.8e-196 688.7 569 64.3
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 2.4e-195 686.0 572 64.2
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 4.2e-195 685.3 572 64.3
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 7.1e-195 684.5 566 63.8
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 1.6e-194 683.3 576 65.3
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 4.6e-194 681.8 581 67.3
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 6.0e-194 681.4 569 63.4
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 2.3e-193 679.5 574 64.8
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 1.9e-192 676.4 574 61.3
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 5.6e-192 674.9 576 63.9
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 2.1e-191 672.9 574 63.1
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 4.8e-191 671.8 578 62.8
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 6.2e-191 671.4 577 63.4
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 8.1e-191 671.0 569 64.0
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 1.4e-190 670.2 571 61.6
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 1.8e-190 669.8 572 63.5
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 1.8e-190 669.8 568 63.6
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 2.4e-190 669.5 572 63.1
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 4.0e-190 668.7 569 62.6
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.9e-190 667.9 579 62.0
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 9.0e-190 667.5 572 62.6
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 9.0e-190 667.5 570 62.1
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.5e-189 666.8 579 61.8
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 2.6e-189 666.0 574 61.8
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 5.8e-189 664.8 574 62.5
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 7.6e-189 664.5 516 67.2
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 7.6e-189 664.5 571 61.5
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 7.6e-189 664.5 572 63.5
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 2.9e-188 662.5 550 65.1
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.9e-188 661.8 576 62.2
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.1e-187 660.6 579 61.7
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 1.4e-187 660.2 572 63.8
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 1.9e-187 659.8 571 62.3
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 1.9e-187 659.8 574 62.7
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 2.4e-187 659.4 579 61.0
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 4.2e-187 658.7 579 61.7
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 4.6e-186 655.2 577 61.9
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 6.0e-186 654.8 576 61.5
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 6.0e-186 654.8 574 62.4
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 1.0e-185 654.1 572 62.2
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 3.9e-185 652.1 569 61.0
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 5.1e-185 651.7 569 63.8
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 1.3e-183 647.1 499 66.1
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 1.3e-183 647.1 588 59.9
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 2.1e-183 646.4 576 60.8
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 1.1e-182 644.0 596 60.2
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 2.0e-181 639.8 575 60.7
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.6e-181 639.4 566 60.6
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 4.5e-181 638.6 569 59.6
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 1.0e-180 637.5 575 59.0
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 1.0e-180 637.5 577 60.5
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 1.3e-180 637.1 476 70.2
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 2.2e-180 636.3 569 59.6
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 2.1e-178 629.8 570 58.4
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 6.0e-178 628.2 528 64.2
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 8.7e-177 624.4 573 61.6
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 7.4e-176 621.3 570 58.2
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 1.3e-175 620.5 567 58.2
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 1.6e-175 620.2 567 58.2
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 1.6e-175 620.2 567 58.2
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 1.6e-175 620.2 572 60.1
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 3.7e-175 619.0 573 62.0
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 8.2e-175 617.8 569 57.6
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 8.2e-175 617.8 570 58.1
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 1.1e-174 617.5 570 58.2
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 1.8e-174 616.7 569 57.5
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 1.7e-172 610.1 595 56.1
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 1.7e-172 610.1 613 56.8
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 1.1e-171 607.4 603 57.7
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 3.2e-171 605.9 654 54.9
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 4.2e-171 605.5 580 60.3
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 2.1e-170 603.2 508 66.3
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 6.1e-170 601.7 584 56.2
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 1.1e-168 597.4 592 57.4
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 7.4e-168 594.7 570 56.1
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 7.4e-168 594.7 482 66.0
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 1.7e-167 593.6 582 56.2
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 8.2e-167 591.3 572 59.3
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 1.8e-166 590.1 571 56.0
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 6.9e-166 588.2 461 67.2
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 2.3e-161 573.2 502 60.4
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 1.1e-152 544.3 433 68.8
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 9.7e-152 541.2 510 57.1
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 2.5e-147 526.6 491 58.2
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 8.2e-143 511.5 577 49.7
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 1.2e-141 507.7 536 52.6
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 2.5e-139 500.0 514 52.5
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 2.1e-138 496.9 590 51.9
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 8.0e-138 495.0 349 72.2
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 4.0e-137 492.7 481 56.5
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 1.2e-136 491.1 349 73.4
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 2.6e-136 490.0 546 52.0
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 8.0e-130 468.4 337 72.4
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 2.4e-126 456.8 403 63.0
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 2.9e-119 433.3 534 50.0
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 6.4e-119 432.2 495 49.9
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 6.8e-113 412.1 369 59.6
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.0e-108 396.7 243 85.6
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 4.0e-105 386.3 242 81.0
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 4.0e-105 386.3 242 81.0
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 8.6e-100 368.6 234 79.1
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 8.4e-95 352.1 282 66.0
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 7.8e-93 345.5 432 48.6
Cpa.g.sc1.24 Carica papaya HOM05D004776 ORTHO05D005777 1.7e-92 344.4 429 49.7
Hund01475 Selenicereus undatus HOM05D004776 ORTHO05D005777 1.7e-92 344.4 416 51.0
BcaNung05691 Brassica carinata HOM05D004776 ORTHO05D005777 4.3e-91 339.7 393 48.3
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 1.2e-90 338.2 575 38.4
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.1e-89 333.6 192 88.5
Actinidia03705 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.2e-88 331.6 336 54.5
Atru.chr3.3553 Acer truncatum HOM05D004776 ORTHO05D005777 2.6e-88 330.5 304 55.9
MBI18_g20776_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.1e-82 310.8 378 49.5
MD00G1033900 Malus domestica HOM05D004776 ORTHO05D005777 3.1e-81 307.0 408 46.8
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 5.6e-75 286.2 556 36.0
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 9.6e-75 285.4 159 88.1
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 3.5e-61 240.4 143 83.9
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.3e-59 233.4 143 85.3
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 8.2e-58 229.2 143 83.2
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 3.1e-57 227.3 198 64.6
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 2.6e-56 224.2 129 89.1
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 5.9e-56 223.0 461 36.9
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 3.2e-54 217.2 128 85.9
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-49 202.2 559 30.8
AagrBONN_evm.TU.Sc2ySwM_228.5408 Anthoceros agrestis HOM05D004776 ORTHO05D005777 5.1e-44 183.3 513 30.2
Ca_01994_v3 Cicer arietinum L. HOM05D004776 ORTHO05D005777 1.7e-42 178.3 238 45.8
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.4e-33 147.9 88 84.1
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.9e-30 138.3 92 76.1
Os02g0142250 Oryza sativa ssp. japonica HOM05D004776 ORTHO05D005777 1.8e-28 131.7 176 44.3
Os02g0146500 Oryza sativa ssp. japonica HOM05D004776 ORTHO05D005777 4.5e-24 117.1 210 37.1
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 1.5e-22 112.1 129 51.2
Gohir.A03G030950 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.2e-22 110.5 164 40.2
FAN23G0725 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.3e-20 104.8 121 47.1
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.2e-19 102.4 254 31.5
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 1.3e-18 99.0 257 30.0
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 1.4e-17 95.5 594 25.6
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 7.7e-16 89.7 45 93.3
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.5e-14 85.5 52 80.8
MD00G1165500 Malus domestica HOM05D004776 ORTHO05D005777 3.9e-07 60.8 88 43.2


User provided reference genes

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