Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 5.2e-64 247.7 136 100.0
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.6e-49 199.5 132 84.1
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.7e-43 177.6 135 72.6
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.3e-42 174.9 124 77.4
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 5.6e-42 174.5 124 78.2
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.8e-40 169.5 121 75.2
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.8e-40 169.5 121 75.2
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.8e-40 169.5 123 76.4
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 3.1e-40 168.7 128 73.4
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.5e-39 166.4 132 69.7
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.5e-39 166.4 131 72.5
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.5e-39 166.4 134 69.4
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.5e-39 166.4 124 74.2
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.5e-39 166.4 124 74.2
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 2.0e-39 166.0 124 72.6
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 2.0e-39 166.0 128 71.1
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 2.0e-39 166.0 127 72.4
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.6e-39 165.6 126 73.0
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.6e-39 165.6 122 76.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 7.6e-39 164.1 121 72.7
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 7.6e-39 164.1 134 69.4
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.3e-38 163.3 122 73.8
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.7e-38 162.9 118 75.4
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 2.9e-38 162.2 114 76.3
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 2.9e-38 162.2 123 71.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 2.9e-38 162.2 122 74.6
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 4.9e-38 161.4 121 72.7
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 6.4e-38 161.0 126 67.5
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 6.4e-38 161.0 122 73.8
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 6.4e-38 161.0 121 71.9
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 8.4e-38 160.6 139 69.1
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.1e-37 160.2 134 67.2
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.1e-37 160.2 110 77.3
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.1e-37 160.2 133 68.4
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.1e-37 160.2 133 68.4
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.4e-37 159.8 127 71.7
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 1.4e-37 159.8 123 71.5
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.9e-37 159.5 126 70.6
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 2.4e-37 159.1 126 71.4
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 2.4e-37 159.1 121 69.4
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 4.2e-37 158.3 112 75.9
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 7.1e-37 157.5 123 69.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 7.1e-37 157.5 123 69.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 7.1e-37 157.5 123 69.9
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 9.3e-37 157.1 110 75.5
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 9.3e-37 157.1 126 69.0
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 9.3e-37 157.1 136 64.7
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.6e-36 156.4 117 74.4
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.6e-36 156.4 123 69.1
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.6e-36 156.4 123 69.1
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.6e-36 156.4 115 73.9
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.6e-36 156.4 116 74.1
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 2.1e-36 156.0 115 75.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.1e-36 156.0 108 79.6
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.1e-36 156.0 115 72.2
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 2.7e-36 155.6 122 70.5
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 2.7e-36 155.6 123 67.5
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 3.5e-36 155.2 122 68.9
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 3.5e-36 155.2 132 62.9
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 3.5e-36 155.2 120 67.5
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 4.6e-36 154.8 111 74.8
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 4.6e-36 154.8 113 75.2
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 6.0e-36 154.5 126 65.9
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 7.9e-36 154.1 121 70.2
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.0e-35 153.7 108 78.7
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.0e-35 153.7 122 68.9
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.0e-35 153.7 114 72.8
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.3e-35 153.3 111 73.9
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.8e-35 152.9 115 72.2
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.8e-35 152.9 121 70.2
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 2.3e-35 152.5 126 67.5
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 2.3e-35 152.5 123 68.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 3.0e-35 152.1 126 68.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 3.9e-35 151.8 111 72.1
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 5.1e-35 151.4 110 73.6
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 6.7e-35 151.0 106 76.4
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 6.7e-35 151.0 134 59.7
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.7e-35 150.6 108 76.9
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.5e-34 149.8 108 76.9
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.9e-34 149.4 123 68.3
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 2.5e-34 149.1 136 64.0
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 3.3e-34 148.7 113 69.9
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 5.6e-34 147.9 122 65.6
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.6e-33 146.4 119 68.9
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 4.0e-32 141.7 122 63.9
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 2.6e-31 139.0 98 74.5
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 3.4e-31 138.7 112 67.9
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 7.6e-31 137.5 128 64.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.7e-30 136.3 122 58.2
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 6.5e-30 134.4 97 75.3
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.4e-29 133.3 128 60.2
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 9.3e-29 130.6 110 65.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 1.3e-27 126.7 129 52.7
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 5.1e-27 124.8 127 60.6
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.9e-26 122.9 117 64.1
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.7e-26 121.3 110 65.5
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.4e-26 120.9 104 68.3
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 4.8e-25 118.2 122 58.2
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 1.2e-23 113.6 94 68.1
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.1e-19 98.2 100 59.0
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.9e-18 96.3 68 72.1
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.7e-17 93.2 72 65.3
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 5.3e-16 88.2 95 56.8
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.0e-14 84.0 111 41.4
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 1.7e-14 83.2 107 44.9
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-13 80.5 118 38.1
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.0e-11 73.9 51 78.4
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 2.9e-06 55.8 45 66.7


User provided reference genes

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