Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 0.0e+00 1119.8 572 100.0
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 1.3e-278 962.6 563 85.8
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 7.4e-277 956.8 564 85.3
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 1.3e-276 956.1 559 86.4
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 2.8e-252 875.2 559 77.8
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 8.2e-252 873.6 561 77.5
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 9.1e-251 870.2 561 78.3
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 2.6e-250 868.6 561 78.1
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 5.0e-249 864.4 564 77.3
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 4.2e-248 861.3 559 75.8
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 5.5e-248 860.9 564 77.0
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 9.4e-248 860.1 555 77.1
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 9.4e-248 860.1 557 77.2
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 7.9e-247 857.1 553 77.8
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 1.0e-246 856.7 559 76.0
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 1.0e-246 856.7 563 76.0
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 3.0e-246 855.1 557 76.3
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 1.1e-245 853.2 558 77.6
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 1.1e-245 853.2 563 75.8
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 1.5e-245 852.8 558 76.9
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 3.3e-245 851.7 553 76.7
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 5.7e-245 850.9 557 75.8
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 5.7e-245 850.9 558 76.0
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.2e-244 849.0 561 75.9
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 3.7e-244 848.2 561 75.8
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 3.7e-244 848.2 557 75.9
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 6.3e-244 847.4 561 75.6
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 8.2e-244 847.0 554 77.3
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 8.2e-244 847.0 557 75.8
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.4e-243 846.3 557 75.8
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 5.3e-243 844.3 558 76.5
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 7.0e-243 844.0 554 76.9
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 9.1e-243 843.6 558 75.3
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 7.7e-242 840.5 558 75.1
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 7.7e-242 840.5 561 74.2
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.0e-241 840.1 567 73.7
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 5.0e-241 837.8 551 75.7
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 7.2e-240 833.9 561 74.0
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.1e-239 832.4 573 73.3
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 4.7e-239 831.2 561 75.0
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 1.4e-238 829.7 563 73.5
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 3.9e-238 828.2 626 68.8
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 3.9e-238 828.2 586 71.2
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 5.2e-238 827.8 558 73.5
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.1e-237 826.6 581 71.9
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 2.6e-237 825.5 553 75.9
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 2.6e-237 825.5 571 73.4
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 2.6e-237 825.5 565 72.7
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 3.3e-237 825.1 560 73.4
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 4.4e-237 824.7 559 74.2
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 7.4e-237 823.9 559 73.7
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 9.7e-237 823.5 606 70.6
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 9.7e-237 823.5 558 73.5
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.3e-236 823.2 555 76.6
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 2.8e-236 822.0 559 74.1
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 8.2e-236 820.5 561 72.5
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 8.2e-236 820.5 561 73.1
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 1.8e-235 819.3 556 72.5
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 2.4e-235 818.9 563 73.4
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 3.1e-235 818.5 548 75.2
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 3.1e-235 818.5 562 72.4
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 4.1e-235 818.1 557 75.6
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 5.3e-235 817.8 555 76.0
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 4.5e-234 814.7 558 72.4
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 7.7e-234 813.9 576 71.4
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 1.3e-233 813.1 552 75.4
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 2.9e-233 812.0 548 73.9
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 2.9e-233 812.0 548 74.1
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 3.8e-233 811.6 552 74.5
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 5.0e-233 811.2 547 75.0
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 1.1e-232 810.1 539 76.1
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 1.5e-232 809.7 552 74.3
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 1.9e-232 809.3 558 72.9
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 2.5e-232 808.9 558 72.9
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 4.2e-232 808.1 554 73.1
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 7.2e-232 807.4 555 72.6
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 1.2e-231 806.6 558 72.8
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 1.2e-231 806.6 558 72.8
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 1.6e-231 806.2 556 72.7
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 2.1e-231 805.8 556 72.8
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 2.7e-231 805.4 558 72.8
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 4.7e-231 804.7 558 71.7
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 8.0e-231 803.9 555 71.9
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.0e-230 803.5 605 69.8
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 5.2e-230 801.2 536 74.1
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 1.5e-229 799.7 550 74.2
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 2.0e-229 799.3 558 72.8
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 4.8e-228 794.7 558 70.6
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 9.1e-227 790.4 557 71.5
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.2e-226 790.0 529 75.8
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 1.6e-226 789.6 555 73.0
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 2.0e-226 789.3 547 74.2
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 2.7e-226 788.9 552 71.9
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 2.7e-226 788.9 558 71.3
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 2.7e-226 788.9 558 71.3
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 4.5e-226 788.1 558 70.8
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 1.7e-225 786.2 558 71.0
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 2.9e-225 785.4 555 69.9
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 2.9e-225 785.4 557 71.1
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 2.9e-225 785.4 552 71.4
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 5.0e-225 784.6 555 70.8
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 1.1e-224 783.5 553 72.5
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 2.2e-220 769.2 534 72.8
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 2.4e-219 765.8 597 66.2
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 3.1e-219 765.4 537 71.9
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 7.0e-219 764.2 589 67.6
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 9.1e-219 763.8 555 70.1
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 2.0e-218 762.7 516 72.5
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 5.9e-218 761.1 534 71.3
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 3.3e-216 755.4 639 62.4
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 3.3e-216 755.4 551 69.1
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 3.7e-212 741.9 554 68.6
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 4.1e-211 738.4 552 65.8
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 2.7e-210 735.7 557 68.0
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 8.0e-207 724.2 553 65.8
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 1.5e-205 719.9 577 64.6
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 1.3e-204 716.8 453 79.0
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 8.3e-204 714.1 473 74.2
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 2.8e-199 699.1 475 73.5
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.4e-195 686.8 555 65.2
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 6.6e-193 677.9 554 61.0
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 4.9e-188 661.8 480 70.0
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 3.2e-187 659.1 548 61.1
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 3.0e-185 652.5 501 63.9
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 2.5e-176 622.9 561 57.6
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 6.6e-169 598.2 412 71.8
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 2.3e-161 573.2 359 81.3
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 1.8e-158 563.5 394 70.1
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 3.1e-158 562.8 394 69.5
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 2.0e-157 560.1 394 69.8
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 3.9e-153 545.8 357 75.6
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 1.7e-140 503.8 549 48.5
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 1.2e-130 471.1 318 74.8
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 3.9e-129 466.1 533 44.7
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 4.5e-117 426.0 272 78.3
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 2.3e-113 413.7 337 64.7
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 4.9e-95 352.8 220 76.8
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 1.1e-81 308.5 195 73.3
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 2.4e-78 297.4 200 77.5
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 4.4e-64 250.0 195 66.2
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 2.8e-50 204.1 152 67.1
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 2.4e-49 201.1 141 72.3
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 5.8e-48 196.4 147 68.0
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 3.0e-44 184.1 189 55.0
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 3.3e-43 180.6 117 73.5
Lj1C257T9 Lonicera japonica HOM05D004765 ORTHO05D030006 2.7e-29 134.4 117 61.5
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 5.1e-28 130.2 127 60.6
Sc12g0004650 Simmondsia chinensis HOM05D004765 ORTHO05D030006 1.4e-25 122.1 86 68.6
SEGI_24377 Sequoiadendron giganteum HOM05D004765 ORTHO05D030006 2.6e-24 117.9 88 65.9
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 7.2e-22 109.8 77 67.5
QL04p027443 Quercus lobata HOM05D004765 ORTHO05D030006 2.1e-21 108.2 83 62.7
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 1.8e-20 105.1 109 53.2
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 1.4e-09 68.9 54 55.6
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 5.9e-08 63.5 112 38.4
VMungo0464G0759 Vigna mungo HOM05D004765 ORTHO05D005900 7.2e-06 56.6 35 71.4


User provided reference genes

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