Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 4.6e-143 511.1 248 100.0
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.1e-117 426.8 248 83.1
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 4.2e-104 381.7 250 72.4
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 2.1e-103 379.4 244 73.0
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 2.1e-103 379.4 245 74.3
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 3.0e-102 375.6 244 73.8
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 6.8e-102 374.4 251 70.9
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.8e-102 374.0 247 72.5
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 4.4e-101 371.7 245 73.9
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 5.7e-101 371.3 250 71.2
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 7.5e-101 370.9 249 72.7
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 7.5e-101 370.9 242 74.4
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 9.8e-101 370.5 242 74.4
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.3e-100 370.2 244 72.5
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 2.2e-100 369.4 244 72.1
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 2.8e-100 369.0 240 74.2
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 6.3e-100 367.9 240 73.8
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 8.3e-100 367.5 248 72.6
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 1.4e-99 366.7 243 73.3
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 1.4e-99 366.7 247 72.5
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 1.4e-99 366.7 253 70.0
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 1.8e-99 366.3 248 72.2
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.1e-99 365.5 244 72.1
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 5.4e-99 364.8 241 73.9
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.2e-98 363.6 241 72.6
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.6e-98 363.2 237 73.8
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.6e-98 363.2 242 72.7
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 7.7e-98 360.9 241 73.4
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.3e-97 360.1 245 71.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.7e-97 359.8 249 69.9
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 2.9e-97 359.0 242 69.8
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 5.0e-97 358.2 239 72.0
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 8.6e-97 357.5 242 70.7
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 8.6e-97 357.5 245 71.4
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.5e-96 356.7 247 70.0
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.5e-96 355.9 239 72.4
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 3.3e-96 355.5 243 71.2
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 3.3e-96 355.5 242 72.7
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 5.5e-96 354.8 248 70.2
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 1.2e-95 353.6 250 68.8
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.2e-95 353.6 247 71.3
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.6e-95 353.2 245 71.4
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 2.1e-95 352.8 243 70.4
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 2.8e-95 352.4 242 71.5
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 3.6e-95 352.1 243 70.4
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 3.6e-95 352.1 279 63.1
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 4.7e-95 351.7 241 70.5
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 6.1e-95 351.3 242 69.8
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 8.0e-95 350.9 238 70.2
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 1.0e-94 350.5 234 70.5
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.0e-94 350.5 243 67.5
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 2.3e-94 349.4 242 68.6
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 2.3e-94 349.4 249 68.3
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 3.0e-94 349.0 243 70.0
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 4.0e-94 348.6 237 72.2
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 1.5e-93 346.7 243 70.4
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.5e-93 346.7 239 69.9
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.5e-93 346.7 241 71.4
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 2.6e-93 345.9 240 70.4
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 3.4e-93 345.5 239 70.3
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 9.8e-93 344.0 244 68.9
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 9.8e-93 344.0 241 68.0
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 9.8e-93 344.0 238 69.3
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 2.2e-92 342.8 241 69.3
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 2.2e-92 342.8 250 68.0
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 3.7e-92 342.0 259 67.6
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 4.9e-92 341.7 240 67.5
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 6.3e-92 341.3 240 68.3
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.3e-92 341.3 310 57.7
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 8.3e-92 340.9 242 67.8
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 2.4e-91 339.3 254 64.6
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.3e-89 333.6 230 68.3
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 2.3e-89 332.8 242 68.6
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.9e-89 332.4 250 66.4
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 1.6e-87 326.6 242 64.9
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 4.9e-84 315.1 248 64.9
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.4e-83 312.8 204 72.5
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 3.5e-82 308.9 304 53.3
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.0e-81 307.4 262 60.7
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.9e-81 305.4 193 75.6
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 6.8e-78 294.7 182 77.5
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.2e-77 293.9 249 61.4
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.2e-77 293.9 280 55.0
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.5e-77 293.5 190 74.7
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 1.5e-77 293.5 255 55.7
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 3.5e-74 282.3 175 74.9
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 6.0e-74 281.6 250 56.4
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 3.3e-72 275.8 276 52.5
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.6e-71 273.5 272 51.8
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 3.6e-71 272.3 259 56.8
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 3.1e-70 269.2 184 70.7
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 3.1e-70 269.2 211 61.6
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 2.1e-66 256.5 246 55.7
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.5e-64 250.4 214 58.4
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.6e-63 245.7 283 46.6
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 1.4e-62 243.8 289 49.1
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 5.4e-59 231.9 134 82.8
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 2.5e-56 223.0 254 49.2
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.2e-50 204.1 209 52.6
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 6.0e-50 201.8 136 70.6
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 3.5e-42 176.0 117 70.9
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 2.2e-28 130.2 85 74.1
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.0e-25 121.3 93 67.7
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.9e-19 100.5 87 56.3
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 3.0e-09 66.6 37 73.0
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 2.6e-08 63.5 171 28.7
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 5.7e-08 62.4 170 27.1
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 5.7e-08 62.4 179 26.8
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 9.7e-08 61.6 177 26.6
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.3e-07 61.2 131 25.2
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 8.2e-07 58.5 194 25.3
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 8.2e-07 58.5 137 22.6
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 1.8e-06 57.4 131 26.7
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 2.4e-06 57.0 174 28.2
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 3.1e-06 56.6 192 26.6
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 4.1e-06 56.2 175 25.7
PGSC0003DMG402022530 Solanum tuberosum HOM05D006469 ORTHO05D008034 7.0e-06 55.5 129 31.8
Sopen03g006220 Solanum pennellii HOM05D006469 ORTHO05D008034 9.1e-06 55.1 129 31.0


User provided reference genes

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