Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3477 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-71 271.2 132 100.0
ECA240G0803 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-47 191.0 107 84.1
ECA232G3319 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-44 180.6 107 81.3
ECA233G0883 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-42 174.9 107 78.5
ECA240G3804 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-41 172.2 107 76.6
ECA232G1227 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.9e-41 170.6 120 70.8
ECA234G4404 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-37 160.2 87 86.2
ECA234G1407 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-30 136.0 107 64.5
ECA233G5539 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-30 135.2 82 79.3
ECA238G0883 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-27 125.2 94 67.0
ECA232G1531 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-19 97.4 110 49.1
HanXRQChr09g0266471 Helianthus annuus HOM05D000002 ORTHO05D000001 8.5e-19 97.4 68 63.2
ECA232G0699 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-16 89.4 103 46.6
ECA238G1806 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-15 85.5 67 61.2
ECA238G3780 Erigeron canadensis HOM05D000002 ORTHO05D002222 3.3e-15 85.5 67 61.2
ECA248G2283 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-15 84.7 101 47.5
ECA238G4695 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-13 80.5 95 48.4
ECA236G0366 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-12 76.6 115 44.3
RcHm_v2.0_Chr3g0454851 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-12 76.6 107 43.0
ECA248G0638 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-12 76.3 94 50.0
ECA236G2708 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-11 73.9 70 52.9
RcHm_v2.0_Chr7g0182831 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-11 72.8 105 41.9
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 6.5e-11 71.2 110 39.1
ECA234G1333 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 83 47.0
ECA233G4510 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.5e-10 70.1 126 38.9
CSS0046748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-10 69.3 78 50.0
C05p29410 Brassica napus HOM05D000013 ORTHO05D001452 3.2e-10 68.9 93 46.2
BolC5t31672H Brassica oleracea HOM05D001466 ORTHO05D001452 3.2e-10 68.9 93 46.2
RcHm_v2.0_Chr1g0326341 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-10 68.9 108 38.9
CSS0031686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-10 68.6 120 40.0
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 7.2e-10 67.8 100 38.0
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.0 116 37.9
ECA233G4547 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-09 67.0 108 38.0
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-09 66.2 107 37.4
ECA233G4181 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-09 65.1 93 45.2
MD04G1231400 Malus domestica HOM05D000002 ORTHO05D000001 6.1e-09 64.7 92 39.1
TPR.G14261 Trifolium pratense HOM05D000002 ORTHO05D000001 6.1e-09 64.7 114 36.8
ECA247G2938 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-09 64.3 118 37.3
A07p40730 Brassica napus HOM05D000002 ORTHO05D000001 1.0e-08 63.9 48 52.1
CSS0015658 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.8 109 36.7
HanXRQChr14g0440681 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-08 62.8 100 38.0
HanXRQChr14g0457091 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-08 62.8 100 38.0
HanXRQChr14g0457791 Helianthus annuus HOM05D000013 ORTHO05D000011 2.3e-08 62.8 100 38.0
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-08 62.8 95 40.0
RcHm_v2.0_Chr2g0139021 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.8 97 38.1
Sopen01g012150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-08 62.8 91 41.8
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 4.0e-08 62.0 70 44.3
TPR.G15919 Trifolium pratense HOM05D000002 ORTHO05D000001 4.0e-08 62.0 64 43.8
CSS0013254 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 109 36.7
CSS0018300 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-08 61.6 65 44.6
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-08 61.6 52 51.9
Sed0009540 Sechium edule HOM05D000002 ORTHO05D000001 5.2e-08 61.6 77 44.2
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 48 50.0
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 48 50.0
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 61.6 112 34.8
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.7e-08 61.2 49 51.0
Ah.04g160330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 8.8e-08 60.8 65 41.5
ECA246G0689 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-08 60.8 52 63.5
HanXRQChr03g0093111 Helianthus annuus HOM05D000002 ORTHO05D000001 8.8e-08 60.8 79 43.0
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 8.8e-08 60.8 85 40.0
ECA233G3460 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 124 31.5
ECA240G1759 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 140 34.3
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-07 60.5 103 35.9
CSS0011100 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.1 111 34.2
RcHm_v2.0_Chr7g0182281 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.1 94 41.5
Sopen10g017230 Solanum pennellii HOM05D000004 ORTHO05D000001 1.5e-07 60.1 47 48.9
CSS0014384 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 53 47.2
CSS0044431 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 119 37.0
CSS0050312 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 100 39.0
ECA232G3680 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 98 37.8
ECA234G0889 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 134 34.3
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-07 59.7 110 39.1
ECA246G3662 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.0e-07 59.7 117 33.3
HanXRQChr16g0515531 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-07 59.7 108 35.2
ECA233G3870 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-07 59.3 103 38.8
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 2.6e-07 59.3 107 34.6
Sopen01g005660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 103 40.8
Sopen01g050910 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen03g026870 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen03g027590 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen05g029270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 119 31.9
Sopen08g016690 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen08g017760 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen10g019670 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen10g024340 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen11g006290 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen11g022120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 99 37.4
Sopen12g008520 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-07 59.3 79 43.0
ECA234G0657 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-07 58.9 162 32.1
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-07 58.9 114 36.0
Atru.chr11.149 Acer truncatum HOM05D000002 ORTHO05D000001 4.4e-07 58.5 109 37.6
ECA238G4167 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-07 58.5 101 37.6
HanXRQChr08g0213731 Helianthus annuus HOM05D000002 ORTHO05D000001 4.4e-07 58.5 105 37.1
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-07 58.5 53 47.2
Rhsim02G0220400 Rhododendron simsii HOM05D000040 ORTHO05D001305 4.4e-07 58.5 44 52.3
TAR180G0004 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.4e-07 58.5 110 37.3
CSS0037493 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-07 58.2 100 36.0
ECA233G2076 Erigeron canadensis HOM05D000013 ORTHO05D000011 5.7e-07 58.2 128 35.9
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 5.7e-07 58.2 108 38.9
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 5.7e-07 58.2 108 34.3
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 5.7e-07 58.2 114 36.8
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 58.2 47 55.3
TPR.G22883 Trifolium pratense HOM05D000269 ORTHO05D000216 5.7e-07 58.2 47 48.9
CSS0043893 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-07 57.8 108 33.3
Sopen05g028460 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-07 57.8 55 50.9
ECA232G0739 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-07 57.4 120 32.5
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-07 57.4 120 32.5
MD09G1214100 Malus domestica HOM05D000002 ORTHO05D000001 9.7e-07 57.4 102 37.3
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 9.7e-07 57.4 114 37.7
TPR.G20899 Trifolium pratense HOM05D000002 ORTHO05D000001 9.7e-07 57.4 111 34.2
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-06 57.0 120 31.7
CSS0047697 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 57.0 108 37.0
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-06 57.0 116 36.2
MD12G1052500 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-06 57.0 114 36.0
Sed0002005 Sechium edule HOM05D000002 ORTHO05D000001 1.3e-06 57.0 47 46.8
CSS0012998 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 102 35.3
ECA232G4625 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 42 52.4
TPR.G27418 Trifolium pratense HOM05D000002 ORTHO05D000001 1.7e-06 56.6 45 46.7
TPR.G3798 Trifolium pratense HOM05D000002 ORTHO05D000001 1.7e-06 56.6 43 53.5
CSS0042463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 56.2 101 35.6
HanXRQChr06g0174021 Helianthus annuus HOM05D000002 ORTHO05D000001 2.2e-06 56.2 83 39.8
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 2.2e-06 56.2 103 35.0
PSO478G1308 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-06 56.2 81 39.5
SHI07621 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.2 47 53.2
Sopen04g023780 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 56.2 103 39.8
Ah.01g008330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.8e-06 55.8 92 37.0
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 2.8e-06 55.8 90 36.7
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 2.8e-06 55.8 72 44.4
SHI00046 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.8 47 53.2
SHI00047 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.8 47 53.2
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.8 47 53.2
SHI36896 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.8 42 57.1
SHI50456 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.8 47 53.2
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.8 47 53.2
Sed0023410 Sechium edule HOM05D000002 ORTHO05D000001 2.8e-06 55.8 112 35.7
Sopen09g024120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-06 55.8 114 36.0
ECA233G6050 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 72 41.7
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-06 55.5 72 41.7
HanXRQChr07g0187191 Helianthus annuus HOM05D000002 ORTHO05D000001 3.7e-06 55.5 42 52.4
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-06 55.5 111 36.9
Sopen12g027300 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-06 55.5 111 39.6
CSS0005122 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-06 55.1 109 35.8
CSS0032534 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-06 55.1 104 35.6
CSS0034909 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-06 55.1 81 40.7
HanXRQChr10g0285731 Helianthus annuus HOM05D000002 ORTHO05D000001 4.8e-06 55.1 75 41.3
Sopen01g016330 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 55.1 74 44.6
Sopen06g016060 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 55.1 103 38.8
Atru.chr8.679 Acer truncatum HOM05D000002 ORTHO05D000001 6.3e-06 54.7 65 40.0
ECA236G2445 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.3e-06 54.7 97 40.2
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.3e-06 54.7 107 32.7
RcHm_v2.0_Chr3g0475621 Rosa chinensis HOM05D000002 ORTHO05D000001 6.3e-06 54.7 117 31.6
Sopen10g016020 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-06 54.7 47 44.7
Sopen11g014630 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-06 54.7 47 44.7
VMungo1080G1174 Vigna mungo HOM05D000451 ORTHO05D000351 6.3e-06 54.7 126 31.7
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 8.2e-06 54.3 84 34.5
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-06 54.3 95 35.8
SHI20448 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-06 54.3 47 51.1
SHI26639 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-06 54.3 47 51.1
Sopen09g025570 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 54.3 71 43.7
Sopen11g014180 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 54.3 115 34.8


User provided reference genes

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