Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 5.5e-40 167.2 83 100.0
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.6e-23 112.5 83 66.3
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 3.0e-22 108.2 82 64.6
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 4.4e-21 104.4 80 66.2
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 7.5e-21 103.6 83 62.7
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 5.3e-19 97.4 86 59.3
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 3.5e-18 94.7 82 61.0
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 4.5e-18 94.4 84 56.0
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 7.7e-18 93.6 86 53.5
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 1.3e-17 92.8 83 59.0
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 1.7e-17 92.4 86 55.8
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 2.2e-17 92.0 86 53.5
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.9e-17 91.7 86 53.5
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 2.9e-17 91.7 86 55.8
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 3.8e-17 91.3 84 56.0
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 3.8e-17 91.3 83 56.6
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 8.5e-17 90.1 83 54.2
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 8.5e-17 90.1 86 55.8
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 8.5e-17 90.1 86 55.8
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-16 89.7 87 55.2
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-16 89.7 87 55.2
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-16 89.7 87 55.2
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-16 89.7 87 55.2
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-16 89.7 87 55.2
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.5e-16 89.4 86 55.8
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.5e-16 89.4 83 54.2
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 1.9e-16 89.0 86 53.5
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 1.9e-16 89.0 83 54.2
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.5e-16 88.6 87 51.7
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.5e-16 88.6 86 52.3
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 3.2e-16 88.2 83 55.4
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 4.2e-16 87.8 83 54.2
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 7.2e-16 87.0 86 55.8
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 7.2e-16 87.0 83 56.6
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 9.4e-16 86.7 87 51.7
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 9.4e-16 86.7 83 51.8
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 1.2e-15 86.3 83 54.2
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 1.2e-15 86.3 86 54.7
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.6e-15 85.9 87 54.0
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.7e-15 85.1 86 51.2
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 2.7e-15 85.1 86 53.5
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 2.7e-15 85.1 86 54.7
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 3.6e-15 84.7 86 52.3
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 6.1e-15 84.0 86 51.2
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 6.1e-15 84.0 86 51.2
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 8.0e-15 83.6 86 52.3
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 8.0e-15 83.6 83 50.6
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 8.0e-15 83.6 83 50.6
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 8.0e-15 83.6 86 52.3
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.0e-14 83.2 83 48.2
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 1.0e-14 83.2 86 51.2
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.0e-14 83.2 85 51.8
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.0e-14 83.2 83 50.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 1.4e-14 82.8 92 51.1
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.8e-14 82.4 83 47.0
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.3e-14 82.0 86 51.2
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 3.0e-14 81.6 87 50.6
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 3.0e-14 81.6 88 50.0
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 5.2e-14 80.9 83 50.6
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 5.2e-14 80.9 86 50.0
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 6.8e-14 80.5 86 51.2
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 6.8e-14 80.5 86 51.2
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 6.8e-14 80.5 86 50.0
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 8.8e-14 80.1 86 50.0
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 8.8e-14 80.1 86 51.2
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.2e-13 79.7 86 47.7
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.2e-13 79.7 79 50.6
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.5e-13 79.3 86 46.5
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 2.0e-13 79.0 80 46.2
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.0e-13 79.0 83 51.8
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.6e-13 78.6 86 47.7
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.6e-13 78.6 86 47.7
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 2.6e-13 78.6 75 54.7
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.6e-13 78.6 85 51.8
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 3.4e-13 78.2 87 49.4
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 3.4e-13 78.2 83 51.8
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 4.4e-13 77.8 87 47.1
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 5.7e-13 77.4 86 47.7
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 5.7e-13 77.4 86 50.0
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 7.5e-13 77.0 86 46.5
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.3e-12 76.3 86 50.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.3e-12 76.3 86 46.5
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.3e-12 76.3 86 46.5
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 4.8e-12 74.3 79 51.9
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 6.3e-12 73.9 80 47.5
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 8.3e-12 73.6 84 44.0
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 8.3e-12 73.6 80 48.8
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 1.1e-11 73.2 80 46.2
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.4e-11 72.8 85 42.4
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.8e-11 72.4 81 48.1
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 3.1e-11 71.6 86 47.7
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 7.0e-11 70.5 85 47.1
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.0e-10 68.9 79 44.3
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 4.5e-10 67.8 75 48.0
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 7.7e-10 67.0 74 43.2
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.7e-09 65.9 86 40.7
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 1.1e-08 63.2 47 66.0
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 3.2e-08 61.6 85 42.4
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 7.2e-08 60.5 84 41.7
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 9.4e-08 60.1 89 39.3
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.6e-07 59.3 83 42.2
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 4.7e-07 57.8 84 40.5
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 1.0e-06 56.6 40 67.5
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 1.4e-06 56.2 66 40.9
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 5.2e-06 54.3 64 43.8


User provided reference genes

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