Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 1.6e-148 530.8 689 100.0
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 8.7e-91 339.0 692 78.5
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 9.1e-80 302.4 694 80.8
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 5.9e-55 219.9 698 70.3
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 9.8e-50 202.6 695 62.9
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 2.8e-49 201.1 696 63.6
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 4.9e-49 200.3 691 68.3
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 1.8e-48 198.4 695 62.2
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 1.1e-45 189.1 663 69.4
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 1.4e-43 182.2 696 64.8
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 2.6e-42 177.9 695 66.8
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 1.7e-41 175.3 695 67.1
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 9.2e-40 169.5 694 69.3
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 1.6e-39 168.7 692 64.5
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 2.0e-39 168.3 695 66.2
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 1.3e-38 165.6 694 60.7
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 1.7e-38 165.2 688 69.0
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 1.1e-37 162.5 690 65.7
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 2.5e-37 161.4 693 66.2
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 2.5e-37 161.4 690 62.9
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 3.3e-37 161.0 692 60.3
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 3.3e-37 161.0 691 59.8
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 5.6e-37 160.2 701 67.6
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 7.3e-37 159.8 690 65.2
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 1.2e-36 159.1 223 66.4
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 1.6e-36 158.7 224 65.6
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 2.8e-36 157.9 224 65.6
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 8.0e-36 156.4 695 63.5
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 2.3e-35 154.8 223 65.9
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 4.0e-35 154.1 694 54.9
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 6.8e-35 153.3 688 71.5
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 6.8e-35 153.3 694 61.2
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 8.9e-35 152.9 693 62.2
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.2e-34 152.5 696 58.2
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.0e-34 151.8 696 57.5
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 2.0e-34 151.8 225 65.8
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.6e-34 151.4 696 56.5
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 4.4e-34 150.6 697 66.7
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 4.4e-34 150.6 223 65.0
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 7.5e-34 149.8 693 59.5
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 7.5e-34 149.8 695 61.7
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 9.8e-34 149.4 691 67.0
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 9.8e-34 149.4 696 57.9
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 9.8e-34 149.4 696 56.5
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 4.9e-33 147.1 695 63.6
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 1.1e-32 146.0 693 59.5
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 1.4e-32 145.6 223 56.1
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 1.4e-32 145.6 695 64.7
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 4.1e-32 144.1 223 64.1
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 7.0e-32 143.3 693 66.1
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 2.1e-31 141.7 701 58.8
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 2.3e-30 138.3 695 64.7
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 2.3e-30 138.3 693 55.1
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 3.9e-30 137.5 695 64.6
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 3.9e-30 137.5 691 68.2
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 6.6e-30 136.7 688 68.5
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 1.5e-29 135.6 692 67.5
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 1.6e-28 132.1 696 63.6
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 1.6e-28 132.1 222 49.1
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 1.1e-27 129.4 694 63.5
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 1.1e-27 129.4 546 69.6
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 4.0e-27 127.5 693 62.9
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 8.9e-27 126.3 700 63.4
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 1.2e-26 125.9 695 66.2
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 3.4e-26 124.4 694 68.2
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 4.4e-26 124.0 696 61.4
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 9.9e-26 122.9 703 61.0
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 1.3e-25 122.5 695 61.0
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.2e-25 121.7 196 66.3
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.2e-25 121.7 196 66.3
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 6.4e-25 120.2 693 59.6
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 1.6e-23 115.5 224 50.0
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.7e-23 114.8 223 43.0
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 3.0e-22 111.3 689 66.9
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 6.6e-22 110.2 694 62.4
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 4.3e-21 107.5 196 63.8
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 4.3e-21 107.5 223 47.5
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.6e-20 105.5 212 43.4
MBI08_g39972_MAGBIO Magnolia biondii HOM05D007057 ORTHO05D008878 2.1e-20 105.1 221 59.3
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 8.1e-20 103.2 689 63.9
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 1.4e-19 102.4 686 63.6
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 1.5e-18 99.0 221 36.7
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 9.9e-18 96.3 219 38.4
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 2.9e-17 94.7 222 37.8
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 4.9e-17 94.0 217 43.8
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 2.4e-16 91.7 187 40.1
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 2.4e-16 91.7 187 44.9
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 5.4e-16 90.5 221 55.7
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 7.1e-16 90.1 187 44.4
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 9.2e-16 89.7 187 44.9
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 9.2e-16 89.7 187 44.9
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 9.2e-16 89.7 201 47.3
HPP92_021394 Vanilla planifolia HOM05D007057 ORTHO05D008878 9.2e-16 89.7 695 55.5
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 1.6e-15 89.0 187 44.9
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 1.6e-15 89.0 221 55.7
Os02g0603100 Oryza sativa ssp. japonica HOM05D007057 ORTHO05D008878 1.5e-13 82.4 225 52.9
Phvul.008G055400 Phaseolus vulgaris HOM05D007057 ORTHO05D008878 1.9e-13 82.0 362 45.0
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 2.4e-11 75.1 164 53.7
ATR0824G263 Amborella trichopoda HOM05D007057 ORTHO05D008878 1.4e-08 65.9 177 54.8
Zm00001eb184050 Zea mays HOM05D007057 ORTHO05D008878 2.4e-08 65.1 228 52.6
SalBow6G0986 Salvia bowleyana HOM05D007057 ORTHO05D008878 4.2e-08 64.3 81 43.2
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 3.5e-07 61.2 79 44.3
SEGI_34516 Sequoiadendron giganteum HOM05D007057 ORTHO05D008878 6.0e-07 60.5 71 38.0
SEGI_35016 Sequoiadendron giganteum HOM05D007057 ORTHO05D008878 6.0e-07 60.5 71 38.0
TPR.G28974 Trifolium pratense HOM05D000021 ORTHO05D008832 7.8e-07 60.1 72 48.6
TPR.G7143 Trifolium pratense HOM05D000021 ORTHO05D000010 1.7e-06 58.9 72 47.2
arahy.Tifrunner.gnm1.ann1.41Z4IQ Arachis hypogaea HOM05D000021 ORTHO05D000010 3.9e-06 57.8 71 49.3
arahy.Tifrunner.gnm1.ann1.MMGG0C Arachis hypogaea HOM05D000021 ORTHO05D000010 3.9e-06 57.8 71 47.9
Oeu016904.2 Olea europaea HOM05D000021 ORTHO05D000010 5.1e-06 57.4 71 39.4
TWI60G0857 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 5.1e-06 57.4 69 46.4
ATR0605G174 Amborella trichopoda HOM05D002120 ORTHO05D002217 8.7e-06 56.6 86 38.4


User provided reference genes

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