Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 2.8e-88 328.6 166 100.0
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 2.9e-72 275.4 165 82.4
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 4.3e-68 261.5 160 78.8
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.8e-67 258.8 160 78.1
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.6e-67 258.5 163 77.9
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 8.1e-67 257.3 157 80.9
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.1e-66 256.9 160 80.0
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 1.4e-66 256.5 160 77.5
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 1.8e-66 256.1 150 83.3
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 1.8e-66 256.1 150 83.3
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 4.0e-66 255.0 160 79.4
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 6.8e-66 254.2 150 82.7
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 8.9e-66 253.8 160 79.4
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 1.5e-65 253.1 151 81.5
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 2.6e-65 252.3 160 77.5
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.6e-65 252.3 150 82.0
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 2.6e-65 252.3 151 82.1
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.4e-65 251.9 150 80.7
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 4.4e-65 251.5 162 77.2
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 5.8e-65 251.1 151 81.5
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 7.5e-65 250.8 160 75.0
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 7.5e-65 250.8 149 82.6
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 9.9e-65 250.4 156 78.8
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.3e-64 250.0 160 77.5
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 1.7e-64 249.6 160 75.0
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 2.2e-64 249.2 159 74.8
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 2.2e-64 249.2 160 77.5
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 2.9e-64 248.8 155 80.0
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 2.9e-64 248.8 160 76.2
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 3.7e-64 248.4 160 76.2
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 3.7e-64 248.4 160 76.2
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 4.9e-64 248.1 160 76.9
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 8.3e-64 247.3 155 78.1
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 8.3e-64 247.3 154 77.3
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 1.1e-63 246.9 159 74.2
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.4e-63 246.5 160 76.9
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.4e-63 245.7 159 74.2
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 2.4e-63 245.7 158 76.6
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 2.4e-63 245.7 160 75.6
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 4.1e-63 245.0 151 77.5
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 4.1e-63 245.0 159 74.2
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.1e-63 245.0 160 75.6
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.1e-63 245.0 160 75.6
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 4.1e-63 245.0 160 75.6
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 4.1e-63 245.0 160 76.2
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 5.4e-63 244.6 153 76.5
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 5.4e-63 244.6 160 75.6
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 9.2e-63 243.8 151 76.8
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 9.2e-63 243.8 160 73.1
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 1.2e-62 243.4 160 73.8
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.6e-62 243.0 154 76.0
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 2.1e-62 242.7 159 76.1
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 2.7e-62 242.3 159 72.3
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 3.5e-62 241.9 150 76.7
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 4.6e-62 241.5 148 79.7
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 7.8e-62 240.7 152 77.0
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 1.7e-61 239.6 148 79.1
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.7e-61 239.6 157 72.6
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 2.3e-61 239.2 158 75.3
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.3e-61 239.2 160 75.0
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 3.0e-61 238.8 151 75.5
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 6.6e-61 237.7 164 71.3
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 8.6e-61 237.3 148 76.4
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 1.9e-60 236.1 170 69.4
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 1.9e-60 236.1 170 69.4
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 5.6e-60 234.6 159 71.1
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 9.6e-60 233.8 162 72.8
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 4.7e-59 231.5 148 75.7
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 4.7e-59 231.5 160 71.9
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 6.2e-59 231.1 148 76.4
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 2.4e-58 229.2 156 74.4
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 8.9e-58 227.3 157 70.7
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 1.3e-56 223.4 148 73.6
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 2.9e-56 222.2 153 73.2
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 6.4e-56 221.1 136 79.4
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.4e-55 219.9 138 76.8
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.9e-55 219.5 134 79.9
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.9e-55 219.5 134 79.9
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 4.2e-55 218.4 164 70.1
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 4.2e-55 218.4 179 64.8
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.0e-53 213.8 161 64.6
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 5.1e-53 211.5 205 57.1
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 6.6e-53 211.1 134 74.6
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 8.7e-53 210.7 148 70.3
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 3.3e-52 208.8 160 67.5
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 9.6e-52 207.2 152 68.4
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.3e-51 206.8 129 77.5
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.8e-50 203.0 124 80.6
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 4.0e-50 201.8 153 67.3
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 1.5e-49 199.9 124 77.4
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 2.6e-49 199.1 116 83.6
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 5.8e-49 198.0 148 63.5
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 9.9e-49 197.2 134 73.9
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 1.4e-47 193.4 148 63.5
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 2.4e-42 176.0 160 58.1
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 2.4e-42 176.0 108 75.0
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 5.3e-42 174.9 167 60.5
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 4.2e-39 165.2 151 59.6
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 7.9e-38 161.0 116 64.7
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 8.7e-37 157.5 151 57.6
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 2.5e-36 156.0 124 65.3
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 1.6e-35 153.3 149 52.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 2.0e-33 146.4 162 50.6
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 7.6e-33 144.4 95 72.6
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 3.8e-32 142.1 95 69.5
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.6e-30 136.7 96 67.7
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 6.7e-29 131.3 149 49.7
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 8.7e-29 131.0 79 73.4
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 4.8e-27 125.2 149 40.9
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-19 100.5 72 62.5
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.3e-16 90.5 59 69.5
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 3.9e-13 79.0 79 55.7
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.2e-06 57.4 42 66.7


User provided reference genes

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