Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3199 Erigeron canadensis HOM05D006595 ORTHO05D008238 5.0e-86 321.2 184 100.0
HanXRQChr11g0344931 Helianthus annuus HOM05D006595 ORTHO05D008238 7.4e-45 184.5 143 69.9
Ciclev10016858m.g Citrus clementina HOM05D006595 ORTHO05D008238 2.0e-42 176.4 163 69.3
Potri.001G009800 Populus trichocarpa HOM05D006595 ORTHO05D008238 2.0e-42 176.4 187 62.6
Dinv13419 Davidia involucrata HOM05D006595 ORTHO05D008238 2.6e-42 176.0 152 74.3
Rhsim13G0228400 Rhododendron simsii HOM05D000750 ORTHO05D000714 1.0e-41 174.1 163 71.8
EL10Ac4g10339 Beta vulgaris HOM05D006595 ORTHO05D008238 1.7e-41 173.3 169 66.9
CSS0011176 Camellia sinensis var. sinensis HOM05D006595 ORTHO05D008238 1.9e-40 169.9 187 65.2
Dinv34743 Davidia involucrata HOM05D006595 ORTHO05D008238 3.2e-40 169.1 126 83.3
Gohir.D11G216800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.2e-39 167.2 179 64.2
PGSC0003DMG401032143 Solanum tuberosum HOM05D006595 ORTHO05D008238 1.6e-39 166.8 193 60.1
Lj2A706G26 Lonicera japonica HOM05D006595 ORTHO05D008238 2.1e-39 166.4 168 67.3
Prupe.6G012000 Prunus persica HOM05D006595 ORTHO05D008238 2.1e-39 166.4 182 65.4
SalBow6G7140 Salvia bowleyana HOM05D006595 ORTHO05D008238 2.1e-39 166.4 179 63.1
Nn7g35969 Nelumbo nucifera HOM05D006595 ORTHO05D008238 2.7e-39 166.0 190 63.2
Gorai.007G232900 Gossypium raimondii HOM05D006595 ORTHO05D008238 6.0e-39 164.9 169 63.3
Peaxi162Scf00441g00213 Petunia axillaris HOM05D006595 ORTHO05D008238 7.9e-39 164.5 176 63.1
MD03G1011600 Malus domestica HOM05D006595 ORTHO05D008238 1.0e-38 164.1 182 64.3
AUR62000037 Chenopodium quinoa HOM05D006595 ORTHO05D008238 1.3e-38 163.7 171 66.7
Manes.03G089200 Manihot esculenta HOM05D006595 ORTHO05D008238 1.8e-38 163.3 168 66.7
Gohir.A11G206900 Gossypium hirsutum HOM05D006595 ORTHO05D008238 2.3e-38 162.9 179 62.0
AUR62019207 Chenopodium quinoa HOM05D006595 ORTHO05D008238 3.0e-38 162.5 162 67.3
Gohir.A08G079300 Gossypium hirsutum HOM05D006595 ORTHO05D008238 3.0e-38 162.5 181 63.0
Gohir.D08G088800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 3.0e-38 162.5 179 62.6
CiPaw.13G171400 Carya illinoinensis HOM05D006595 ORTHO05D008238 3.9e-38 162.2 174 63.2
QL01p010272 Quercus lobata HOM05D006595 ORTHO05D008238 3.9e-38 162.2 183 60.1
Sabra01G0007800 Salix brachista HOM05D006595 ORTHO05D008238 5.1e-38 161.8 187 59.9
SGA_v2.0_scaffold78G25462 Striga asiatica HOM05D006595 ORTHO05D008238 5.1e-38 161.8 149 71.8
Atru.chr3.2190 Acer truncatum HOM05D006595 ORTHO05D008238 6.7e-38 161.4 177 63.3
TAR636G1600 Trochodendron aralioides HOM05D006595 ORTHO05D008238 6.7e-38 161.4 181 63.5
FAN21G3045 Fragaria x ananassa HOM05D000750 ORTHO05D000714 8.7e-38 161.0 179 63.7
Gorai.004G093500 Gossypium raimondii HOM05D006595 ORTHO05D008238 8.7e-38 161.0 178 61.2
Duzib168G0997 Durio zibethinus HOM05D006595 ORTHO05D008238 1.1e-37 160.6 166 65.7
Sopen01g002130 Solanum pennellii HOM05D006595 ORTHO05D008238 1.1e-37 160.6 193 59.1
CsaV3_4G023550 Cucumis sativus L. HOM05D006595 ORTHO05D008238 2.5e-37 159.5 183 61.2
PGR102G3301 Punica granatum HOM05D006595 ORTHO05D008238 2.5e-37 159.5 168 64.3
MELO3C014661.2 Cucumis melo HOM05D006595 ORTHO05D008238 4.3e-37 158.7 181 61.3
FvH4_3g44681 Fragaria vesca HOM05D006595 ORTHO05D008238 4.3e-37 158.7 183 63.9
THA.LOC104815114 Tarenaya hassleriana HOM05D006595 ORTHO05D008238 4.3e-37 158.7 181 61.9
Migut.F01376 Erythranthe guttata HOM05D006595 ORTHO05D008238 7.4e-37 157.9 195 61.5
CDE04G0274 Ceratophyllum demersum HOM05D006595 ORTHO05D008238 9.6e-37 157.5 155 67.7
FAN25G3451 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.3e-36 157.1 183 63.9
TWI34G0416 Tripterygium wilfordii HOM05D006595 ORTHO05D008238 1.6e-36 156.8 161 68.3
FAN16G1668 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.8e-36 156.0 179 62.6
Lsat_1_v5_gn_1_68280 Lactuca sativa HOM05D006595 ORTHO05D008238 4.8e-36 155.2 149 60.4
Lj2A705G49 Lonicera japonica HOM05D006595 ORTHO05D008238 4.8e-36 155.2 127 64.6
RcHm_v2.0_Chr5g0081351 Rosa chinensis HOM05D006595 ORTHO05D008238 4.8e-36 155.2 185 63.2
Cfa009626 Carpinus fangiana HOM05D006595 ORTHO05D008238 6.2e-36 154.8 185 61.1
FAN17G0104 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.2e-36 154.8 183 62.3
CANSAT11G0726 Cannabis sativa HOM05D006595 ORTHO05D008238 8.2e-36 154.5 174 60.3
GSVIVG01025384001 Vitis vinifera HOM05D006595 ORTHO05D008238 8.2e-36 154.5 164 64.0
Oeu038858.2 Olea europaea HOM05D006595 ORTHO05D008238 1.1e-35 154.1 189 61.9
Phvul.007G006200 Phaseolus vulgaris HOM05D006595 ORTHO05D008238 1.1e-35 154.1 176 60.8
ClCG02G023820 Citrullus lanatus HOM05D006595 ORTHO05D008238 1.4e-35 153.7 153 66.0
Haze_22995 Corylus avellana HOM05D006595 ORTHO05D008238 1.4e-35 153.7 185 60.5
Solyc01g006130.4 Solanum lycopersicum HOM05D006595 ORTHO05D008238 1.4e-35 153.7 189 58.7
Cc01_g00990 Coffea canephora HOM05D006595 ORTHO05D008238 1.8e-35 153.3 175 60.0
Sed0019652 Sechium edule HOM05D006595 ORTHO05D008238 1.8e-35 153.3 181 61.3
Ah.04g161600 Amaranthus hybridus HOM05D000750 ORTHO05D000714 3.1e-35 152.5 153 68.0
Eucgr.B03632 Eucalyptus grandis HOM05D006595 ORTHO05D008238 3.1e-35 152.5 187 62.6
Lj5g0010961 Lotus japonicus HOM05D006595 ORTHO05D008238 3.1e-35 152.5 153 67.3
Nitab4.5_0005477g0080 Nicotiana tabacum HOM05D006595 ORTHO05D008238 1.2e-34 150.6 196 50.5
CAN.G140.24 Capsicum annuum HOM05D006595 ORTHO05D008238 1.5e-34 150.2 162 64.8
Cpa.g.sc119.91 Carica papaya HOM05D006595 ORTHO05D008238 1.5e-34 150.2 165 62.4
Os08g0463900 Oryza sativa ssp. japonica HOM05D006595 ORTHO05D008238 3.4e-34 149.1 176 60.8
CARHR129020 Cardamine hirsuta HOM05D006595 ORTHO05D008238 5.8e-34 148.3 181 58.0
AT2G34860 Arabidopsis thaliana HOM05D006595 ORTHO05D008238 1.0e-33 147.5 186 59.7
Nitab4.5_0001620g0030 Nicotiana tabacum HOM05D006595 ORTHO05D008238 1.3e-33 147.1 193 48.7
MSTRG.208 Avicennia marina HOM05D006595 ORTHO05D008238 2.9e-33 146.0 194 58.8
Aa31sc409G10 Aethionema arabicum HOM05D006595 ORTHO05D008238 5.0e-33 145.2 174 61.5
Ca_11377_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 6.5e-33 144.8 153 66.0
Aqoxy2G00094 Aquilegia oxysepala HOM05D006595 ORTHO05D008238 8.4e-33 144.4 190 54.2
BcaC02g11570 Brassica carinata HOM05D006595 ORTHO05D008238 8.4e-33 144.4 178 60.1
MSTRG.8324 Avicennia marina HOM05D006595 ORTHO05D008238 1.1e-32 144.1 190 56.8
Thhalv10017283m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 1.1e-32 144.1 173 62.4
HPP92_016182 Vanilla planifolia HOM05D006595 ORTHO05D008238 1.4e-32 143.7 126 74.6
A04p26620 Brassica napus HOM05D006595 ORTHO05D008238 1.9e-32 143.3 175 57.7
Sp4g17140 Schrenkiella parvula HOM05D006595 ORTHO05D008238 3.2e-32 142.5 178 59.6
C04p13910 Brassica napus HOM05D006595 ORTHO05D008238 5.5e-32 141.7 175 58.3
BolC4t22980H Brassica oleracea HOM05D006595 ORTHO05D008238 5.5e-32 141.7 175 58.3
BraA05t20025Z Brassica rapa HOM05D006595 ORTHO05D008238 7.2e-32 141.4 181 57.5
Carub.0004s1654 Capsella rubella HOM05D006595 ORTHO05D008238 9.3e-32 141.0 172 58.1
A05p10810 Brassica napus HOM05D006595 ORTHO05D008238 1.2e-31 140.6 182 57.7
Hund06674 Selenicereus undatus HOM05D006595 ORTHO05D008238 1.2e-31 140.6 163 59.5
C04p64040 Brassica napus HOM05D006595 ORTHO05D008238 1.6e-31 140.2 175 57.1
BolC4t27880H Brassica oleracea HOM05D006595 ORTHO05D008238 1.6e-31 140.2 175 57.1
BraA04t18167Z Brassica rapa HOM05D006595 ORTHO05D008238 1.6e-31 140.2 175 57.1
Sc16g0012000 Simmondsia chinensis HOM05D006595 ORTHO05D008238 2.1e-31 139.8 183 59.0
BcaB06g28828 Brassica carinata HOM05D006595 ORTHO05D008238 2.7e-31 139.4 175 56.6
Glyma.10G293900 Glycine max HOM05D006595 ORTHO05D008238 3.5e-31 139.0 168 58.9
Medtr1g116170 Medicago truncatula HOM05D006595 ORTHO05D008238 4.6e-31 138.7 124 75.8
BcaC02g07751 Brassica carinata HOM05D006595 ORTHO05D008238 6.1e-31 138.3 175 56.6
Lalb_Chr02g0143771 Lupinus albus HOM05D006595 ORTHO05D008238 7.9e-31 137.9 184 54.9
HPP92_026734 Vanilla planifolia HOM05D006595 ORTHO05D008238 1.3e-30 137.1 126 72.2
Psat6g238960 Pisum sativum HOM05D006595 ORTHO05D008238 2.3e-30 136.3 153 63.4
ATR1149G131 Amborella trichopoda HOM05D006595 ORTHO05D008238 3.0e-30 136.0 94 87.2
TPR.G10430 Trifolium pratense HOM05D006595 ORTHO05D008238 5.1e-30 135.2 126 73.8
PSO339G5391 Papaver somniferum HOM05D006595 ORTHO05D008238 1.1e-29 134.0 165 60.0
PSO384G3168 Papaver somniferum HOM05D006595 ORTHO05D008238 1.1e-29 134.0 165 60.0
COL.COLO4_10447 Corchorus olitorius HOM05D006595 ORTHO05D008238 1.9e-29 133.3 197 43.7
arahy.Tifrunner.gnm1.ann1.ZL64GD Arachis hypogaea HOM05D006595 ORTHO05D008238 4.3e-29 132.1 165 58.2
Glyma.20G243800 Glycine max HOM05D006595 ORTHO05D008238 7.4e-29 131.3 90 84.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.8e-27 126.7 158 60.8
unitig_747.g21415 Utricularia gibba HOM05D006595 ORTHO05D008238 1.8e-27 126.7 197 53.3
SEGI_11759 Sequoiadendron giganteum HOM05D006595 ORTHO05D008238 2.0e-26 123.2 181 53.6
vmacro04249 Vaccinium macrocarpon HOM05D006595 ORTHO05D008238 3.4e-26 122.5 306 34.3
Thecc.09G215500 Theobroma cacao HOM05D006595 ORTHO05D008238 7.7e-26 121.3 142 50.7
Pp3c3_12490 Physcomitrium patens HOM05D006595 ORTHO05D008238 1.1e-24 117.5 162 56.2
CBR_g22940 Chara braunii HOM05D006595 ORTHO05D008238 1.9e-24 116.7 161 54.0
Mapoly0120s0023 Marchantia polymorpha HOM05D006595 ORTHO05D008238 3.2e-24 115.9 143 59.4
arahy.Tifrunner.gnm1.ann1.SSSL8J Arachis hypogaea HOM05D006595 ORTHO05D008238 4.2e-24 115.5 157 56.1
SMO331G0037 Selaginella moellendorffii HOM05D006595 ORTHO05D008238 1.6e-23 113.6 122 66.4
MD11G1014500 Malus domestica HOM05D006595 ORTHO05D008238 6.7e-22 108.2 76 68.4
FAN11G2269 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.5e-21 107.1 113 52.2
FAN16G0514 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.4e-21 104.8 74 67.6
AL4G30870 Arabidopsis lyrata HOM05D006595 ORTHO05D008238 1.3e-20 104.0 167 42.5
FvH4_3g44571 Fragaria vesca HOM05D006595 ORTHO05D008238 2.2e-20 103.2 96 56.2
VMungo0720G3035 Vigna mungo HOM05D006595 ORTHO05D008238 4.1e-19 99.0 106 52.8
QL01p010258 Quercus lobata HOM05D006595 ORTHO05D008238 5.3e-19 98.6 76 61.8
QL08p062509 Quercus lobata HOM05D006595 ORTHO05D008238 5.3e-19 98.6 76 61.8
PRCOL_00006415 Prasinoderma coloniale HOM05D006595 ORTHO05D008238 1.9e-16 90.1 83 71.1
Cre11.g475850 Chlamydomonas reinhardtii HOM05D006595 ORTHO05D008238 1.4e-14 84.0 151 38.4
MCO03G122 Micromonas commoda HOM05D006595 ORTHO05D008238 3.3e-13 79.3 145 49.0
BcaC07g42181 Brassica carinata HOM05D006595 ORTHO05D008238 5.7e-13 78.6 137 42.3
BcaB01g02723 Brassica carinata HOM05D006595 ORTHO05D008238 1.3e-12 77.4 153 41.8
Thhalv10012349m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 8.2e-12 74.7 61 62.3
BcaB06g29011 Brassica carinata HOM05D006595 ORTHO05D008238 1.2e-10 70.9 163 39.9
BcaB01g03109 Brassica carinata HOM05D006595 ORTHO05D008238 1.1e-08 64.3 80 47.5
Pp3c4_29200 Physcomitrium patens HOM05D006595 ORTHO05D008238 3.6e-07 59.3 116 34.5
FAN21G2764 Fragaria x ananassa HOM05D006595 ORTHO05D008238 1.4e-06 57.4 30 86.7


User provided reference genes

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