Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.7e-102 375.9 184 100.0
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 8.9e-67 257.3 184 72.3
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 9.9e-66 253.8 182 73.6
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 3.8e-65 251.9 182 73.1
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 2.6e-50 202.6 172 64.5
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 6.5e-41 171.4 189 51.9
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 1.1e-37 160.6 177 54.8
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 4.3e-37 158.7 187 51.3
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.8e-35 153.3 179 49.7
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 2.4e-35 152.9 177 53.1
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 9.0e-35 151.0 189 47.6
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 9.0e-35 151.0 186 50.0
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.5e-34 148.7 186 47.8
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 4.5e-34 148.7 176 48.9
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 5.8e-34 148.3 183 47.5
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.0e-33 147.5 169 50.9
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.0e-33 147.5 179 48.6
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.3e-33 147.1 172 51.7
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-33 147.1 164 51.2
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 3.8e-33 145.6 172 48.3
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 5.0e-33 145.2 189 47.1
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 6.5e-33 144.8 179 46.4
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 8.4e-33 144.4 182 46.2
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.9e-32 143.3 174 47.7
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 2.5e-32 142.9 167 47.3
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.5e-32 141.7 164 49.4
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 9.3e-32 141.0 170 47.6
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 1.6e-31 140.2 181 47.0
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-31 139.8 174 45.4
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.7e-31 139.4 189 48.1
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 4.6e-31 138.7 181 46.4
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 6.1e-31 138.3 169 47.9
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 6.1e-31 138.3 179 48.0
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 1.0e-30 137.5 190 45.8
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.3e-30 137.1 207 45.4
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.8e-30 136.7 172 47.1
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.3e-30 136.3 194 46.4
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 3.0e-30 136.0 180 46.1
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 3.9e-30 135.6 190 47.4
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 3.9e-30 135.6 169 47.3
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.7e-30 134.4 170 47.1
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 1.5e-29 133.7 168 48.2
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.5e-29 133.7 170 46.5
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 1.9e-29 133.3 167 50.9
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 4.3e-29 132.1 184 46.2
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 5.7e-29 131.7 177 47.5
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 1.6e-28 130.2 178 44.4
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 2.2e-28 129.8 186 44.6
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 3.7e-28 129.0 172 43.0
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 4.8e-28 128.6 186 44.1
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 6.3e-28 128.3 176 44.3
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 8.2e-28 127.9 178 43.3
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 1.1e-27 127.5 174 43.7
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.1e-27 127.5 180 44.4
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 2.4e-27 126.3 172 47.1
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 2.4e-27 126.3 178 46.1
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 3.1e-27 125.9 198 42.9
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 4.1e-27 125.6 175 46.3
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 4.1e-27 125.6 184 41.3
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 5.3e-27 125.2 169 43.2
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 9.0e-27 124.4 170 50.0
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 1.2e-26 124.0 178 38.8
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-26 123.2 173 42.8
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.0e-26 123.2 179 44.7
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.6e-26 122.9 170 43.5
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 3.4e-26 122.5 176 44.9
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 3.4e-26 122.5 191 41.4
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 3.4e-26 122.5 192 40.6
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 4.5e-26 122.1 180 42.8
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 4.5e-26 122.1 176 42.6
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 5.9e-26 121.7 202 41.1
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 5.9e-26 121.7 202 41.1
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 7.7e-26 121.3 206 41.3
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.0e-25 120.9 195 42.1
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-25 120.2 168 42.9
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 1.7e-25 120.2 200 39.5
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 3.8e-25 119.0 177 41.8
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 5.0e-25 118.6 188 43.6
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 6.5e-25 118.2 171 43.9
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 6.5e-25 118.2 179 41.3
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.1e-24 117.5 199 41.2
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 1.4e-24 117.1 183 43.7
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 1.4e-24 117.1 177 44.1
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 1.4e-24 117.1 177 44.1
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 1.9e-24 116.7 177 43.5
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.9e-24 116.7 179 42.5
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-24 116.3 169 40.2
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.5e-24 116.3 186 44.1
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 2.5e-24 116.3 175 43.4
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 3.2e-24 115.9 177 43.5
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 3.2e-24 115.9 179 43.6
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 4.2e-24 115.5 179 41.9
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 5.5e-24 115.2 180 42.8
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 5.5e-24 115.2 183 43.2
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 5.5e-24 115.2 183 43.2
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 5.5e-24 115.2 185 42.2
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 5.5e-24 115.2 178 42.7
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 5.5e-24 115.2 177 42.9
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 7.2e-24 114.8 185 41.6
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.2e-24 114.8 168 42.9
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 1.6e-23 113.6 164 43.9
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 1.6e-23 113.6 176 43.2
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 2.1e-23 113.2 172 43.6
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 3.6e-23 112.5 175 43.4
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 3.6e-23 112.5 175 43.4
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 3.6e-23 112.5 181 44.8
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 4.6e-23 112.1 167 41.9
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-22 110.9 183 39.3
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.4e-22 110.5 177 42.9
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 1.4e-22 110.5 177 41.8
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.8e-22 110.2 192 42.7
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 2.3e-22 109.8 178 43.8
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.3e-22 109.8 185 41.1
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 3.0e-22 109.4 188 41.0
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.0e-22 109.4 184 40.2
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 3.0e-22 109.4 181 42.0
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 3.9e-22 109.0 180 43.3
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.1e-22 108.6 184 42.9
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 6.7e-22 108.2 175 42.9
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 2.0e-21 106.7 182 45.6
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 2.0e-21 106.7 181 38.1
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-21 106.3 161 42.2
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 4.3e-21 105.5 178 40.4
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 7.4e-21 104.8 144 40.3
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.4e-21 104.8 185 37.3
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 1.3e-20 104.0 182 37.9
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 2.2e-20 103.2 169 42.0
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 3.7e-20 102.4 166 41.6
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.7e-20 102.4 180 36.7
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.8e-20 102.1 170 42.9
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 4.8e-20 102.1 169 45.6
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 1.1e-19 100.9 186 38.2
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.1e-19 100.9 186 38.7
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.8e-19 100.1 171 38.6
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 3.1e-19 99.4 172 38.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 4.1e-19 99.0 178 40.4
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 4.1e-19 99.0 182 37.4
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 5.3e-19 98.6 182 39.6
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 3.4e-18 95.9 181 37.6
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 3.4e-18 95.9 184 38.6
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 4.5e-18 95.5 242 35.5
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 1.0e-17 94.4 193 38.3
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 2.9e-17 92.8 181 37.0
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 2.9e-17 92.8 181 37.0
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 2.9e-17 92.8 181 37.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.0e-17 92.0 179 39.1
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.5e-17 91.7 165 35.8
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.5e-16 88.6 116 45.7
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.7e-15 85.5 151 37.7
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.9e-15 84.7 97 45.4
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-14 83.2 162 36.4
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-14 82.4 112 42.9
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 8.8e-14 81.3 171 37.4
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 8.8e-14 81.3 93 45.2
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.8e-12 76.3 114 39.5
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 4.8e-12 75.5 165 37.0
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.3e-12 75.1 97 41.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.2e-12 74.7 97 42.3
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 1.6e-10 70.5 196 31.1
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.5e-10 69.3 155 36.1
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 4.5e-10 68.9 150 37.3
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 5.9e-10 68.6 233 30.0
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.0e-09 67.8 128 36.7
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 1.1e-08 64.3 199 31.2
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 4.2e-08 62.4 180 33.3
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 5.5e-08 62.0 165 28.5
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.7e-07 59.7 178 32.6
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.7e-07 59.7 175 29.7
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.4e-06 57.4 134 36.6
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.4e-06 57.4 196 27.6
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.2e-06 55.5 56 50.0


User provided reference genes

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