Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 4.0e-78 295.4 251 100.0
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 3.9e-49 199.1 139 69.8
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 4.1e-46 189.1 139 67.6
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.0e-25 121.3 140 46.4
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.6e-24 116.7 139 43.2
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 7.5e-24 115.2 136 44.1
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 9.8e-24 114.8 139 43.2
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 4.5e-21 105.9 135 40.0
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 1.0e-20 104.8 139 41.0
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 5.0e-20 102.4 138 42.0
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 8.6e-20 101.7 139 38.8
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 1.2e-18 97.8 139 36.0
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.2e-18 97.8 141 41.1
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.2e-18 97.8 141 41.1
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 8.0e-18 95.1 120 40.0
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.3e-17 93.6 137 40.9
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 6.8e-17 92.0 141 42.6
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.2e-16 91.3 138 38.4
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 2.0e-16 90.5 139 35.3
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.2e-15 87.0 132 40.2
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 3.7e-15 86.3 138 32.6
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 3.7e-15 86.3 142 39.4
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 2.4e-14 83.6 139 33.1
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 4.1e-14 82.8 133 34.6
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 7.0e-14 82.0 139 31.7
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 7.0e-14 82.0 102 44.1
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 2.7e-13 80.1 140 32.9
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 3.5e-13 79.7 139 33.8
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 1.0e-12 78.2 139 30.9
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 1.0e-12 78.2 139 34.5
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 2.3e-12 77.0 140 30.7
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 3.9e-12 76.3 139 29.5
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 6.6e-12 75.5 139 30.9
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 7.3e-11 72.0 133 33.8
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 2.1e-10 70.5 140 32.1
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 2.8e-10 70.1 73 42.5
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.4e-09 67.8 72 43.1
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 1.4e-09 67.8 75 41.3
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 4.0e-09 66.2 139 30.2
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 1.5e-08 64.3 139 30.2
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 3.4e-08 63.2 138 32.6
CsaV3_3G033110 Cucumis sativus L. HOM05D030490 ORTHO05D026338 4.4e-08 62.8 38 71.1
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 7.5e-08 62.0 140 30.7
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 9.8e-08 61.6 70 41.4
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 9.8e-08 61.6 88 35.2
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 2.2e-07 60.5 90 34.4
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.1e-06 58.2 142 26.8
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 1.1e-06 58.2 70 40.0
CDE04G1576 Ceratophyllum demersum HOM05D030490 ORTHO05D026338 1.9e-06 57.4 38 57.9
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 3.2e-06 56.6 142 28.2


User provided reference genes

Program Settings