Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 8.4e-163 577.0 303 100.0
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 9.1e-109 397.5 305 74.1
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 2.3e-96 356.3 303 66.3
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 8.8e-96 354.4 301 66.4
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 5.4e-93 345.1 301 65.4
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.2e-92 344.0 302 65.2
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 1.6e-89 333.6 309 62.5
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 6.1e-89 331.6 301 62.8
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 1.4e-88 330.5 301 63.1
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 2.6e-87 326.2 307 62.9
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 7.5e-87 324.7 306 60.5
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 1.8e-85 320.1 312 61.2
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 2.4e-85 319.7 308 60.4
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 2.7e-84 316.2 316 59.2
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 7.8e-84 314.7 310 60.0
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 2.3e-83 313.2 309 60.2
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 2.3e-83 313.2 308 59.7
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 2.3e-83 313.2 308 59.7
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 3.9e-83 312.4 304 60.9
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 3.9e-83 312.4 305 59.3
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 3.9e-83 312.4 316 58.9
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 6.6e-83 311.6 335 57.6
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 2.5e-82 309.7 328 59.1
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 2.8e-81 306.2 335 58.2
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 3.6e-81 305.8 313 58.1
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 1.4e-80 303.9 309 58.9
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 1.4e-80 303.9 349 53.9
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 2.3e-80 303.1 329 58.4
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 2.3e-80 303.1 313 58.1
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 6.8e-80 301.6 341 54.5
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 1.5e-79 300.4 311 57.6
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 7.5e-79 298.1 312 59.9
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 1.3e-78 297.4 308 57.5
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 4.9e-78 295.4 304 57.2
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 1.1e-77 294.3 299 56.2
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 3.2e-77 292.7 316 57.3
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 7.0e-77 291.6 307 58.0
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 3.5e-76 289.3 319 57.4
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 4.6e-76 288.9 320 54.4
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.3e-75 287.3 321 54.2
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 2.3e-75 286.6 309 57.6
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.3e-75 286.6 320 53.8
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 3.0e-75 286.2 320 54.1
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 3.9e-75 285.8 323 55.1
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 2.5e-74 283.1 320 52.8
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 2.5e-74 283.1 310 56.5
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 4.3e-74 282.3 325 53.2
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 4.3e-74 282.3 318 55.3
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 5.6e-74 282.0 308 57.1
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 7.3e-74 281.6 309 56.0
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 9.5e-74 281.2 220 66.8
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 2.1e-73 280.0 304 58.2
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 3.6e-73 279.3 323 52.9
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 4.7e-73 278.9 355 50.7
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 4.7e-73 278.9 312 53.2
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 4.7e-73 278.9 312 53.2
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 8.1e-73 278.1 323 52.9
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 1.4e-72 277.3 302 58.3
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 1.4e-72 277.3 299 55.9
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 3.1e-72 276.2 303 56.4
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 1.2e-71 274.2 322 51.2
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 2.0e-71 273.5 324 52.5
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 2.0e-71 273.5 334 51.2
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 2.6e-71 273.1 324 53.1
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 3.4e-71 272.7 329 51.7
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 5.8e-71 271.9 319 52.4
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 1.7e-70 270.4 320 50.9
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 2.2e-70 270.0 310 51.9
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 2.4e-69 266.5 324 52.5
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 4.1e-69 265.8 327 51.1
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 7.1e-69 265.0 315 51.1
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 7.1e-69 265.0 199 71.4
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 9.2e-69 264.6 337 49.9
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 1.2e-68 264.2 315 51.1
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 1.7e-67 260.4 324 49.7
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 1.7e-67 260.4 324 49.7
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 3.0e-67 259.6 327 49.5
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 8.6e-67 258.1 324 50.3
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 2.5e-66 256.5 322 49.4
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 3.3e-66 256.1 304 51.3
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 3.3e-66 256.1 331 51.1
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 3.3e-66 256.1 302 50.7
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 7.3e-66 255.0 258 58.5
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.2e-65 254.2 318 50.0
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 1.6e-65 253.8 313 50.2
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 2.1e-65 253.4 312 51.6
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 2.1e-65 253.4 258 58.1
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 5.2e-64 248.8 309 52.1
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 8.9e-64 248.1 314 51.3
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 8.9e-64 248.1 325 49.5
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 8.9e-64 248.1 299 52.8
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 3.4e-63 246.1 325 48.6
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 3.4e-63 246.1 317 51.1
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 3.8e-62 242.7 310 50.3
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 2.4e-61 240.0 326 47.5
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 4.1e-61 239.2 323 47.4
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 7.1e-61 238.4 330 48.2
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 6.6e-59 231.9 315 47.9
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 6.6e-59 231.9 260 54.2
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 5.6e-58 228.8 308 46.4
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 2.1e-57 226.9 302 48.3
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 3.6e-57 226.1 189 65.1
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 3.6e-57 226.1 189 65.1
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 8.1e-57 224.9 231 61.9
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 5.8e-55 218.8 268 51.1
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 3.8e-54 216.1 312 46.5
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 4.9e-54 215.7 318 46.5
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 1.1e-53 214.5 212 59.9
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 3.2e-53 213.0 195 59.5
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 4.2e-53 212.6 306 47.7
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 4.2e-53 212.6 306 47.7
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 1.7e-51 207.2 169 67.5
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 6.6e-51 205.3 301 43.5
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 8.7e-51 204.9 308 46.1
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.8e-48 197.2 341 39.9
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 3.4e-47 193.0 244 50.8
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 1.3e-46 191.0 254 49.6
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 4.9e-46 189.1 205 52.2
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.6e-44 184.1 263 46.4
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 8.7e-43 178.3 336 37.8
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 2.8e-41 173.3 264 47.0
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 3.7e-41 172.9 245 47.3
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 8.1e-41 171.8 205 49.8
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.2e-39 167.9 185 54.1
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 2.6e-39 166.8 287 41.8
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 2.6e-39 166.8 263 43.7
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 4.9e-38 162.5 168 57.7
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 1.9e-37 160.6 226 46.0
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 1.2e-36 157.9 306 38.6
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 1.6e-36 157.5 208 49.0
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 3.5e-36 156.4 310 41.3
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 3.9e-35 152.9 99 79.8
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 6.7e-35 152.1 209 47.4
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 8.7e-35 151.8 211 46.0
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.9e-34 150.6 268 42.5
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 4.3e-34 149.4 202 43.1
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.8e-32 144.1 105 69.5
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 8.4e-30 135.2 106 67.0
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 1.2e-28 131.3 102 67.6
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 1.3e-27 127.9 217 40.6
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 1.1e-26 124.8 149 52.3
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 2.9e-22 110.2 96 61.5
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 3.2e-21 106.7 299 34.1
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 1.2e-20 104.8 80 67.5
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 6.9e-16 89.0 136 45.6
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 1.7e-14 84.3 94 53.2
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.4e-13 81.3 72 62.5
arahy.Tifrunner.gnm1.ann1.K04YXN Arachis hypogaea HOM05D002737 ORTHO05D023756 5.5e-13 79.3 93 50.5
Cpa.g.sc23.121 Carica papaya HOM05D002737 ORTHO05D005828 1.4e-08 64.7 142 36.6
Rhsim13G0195400 Rhododendron simsii HOM05D002737 ORTHO05D005828 1.8e-08 64.3 133 40.6
AagrBONN_evm.TU.Sc2ySwM_368.3190 Anthoceros agrestis HOM05D000001 ORTHO05D072262 4.5e-07 59.7 54 61.1


User provided reference genes

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