Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 9.0e-289 996.1 471 100.0
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 4.5e-240 834.3 459 85.0
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 7.8e-224 780.4 434 84.1
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 9.8e-219 763.5 458 77.3
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 2.1e-200 702.6 461 70.3
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 8.7e-199 697.2 459 69.3
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 4.3e-198 694.9 458 69.0
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 3.6e-197 691.8 457 69.6
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 2.0e-195 686.0 459 69.9
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 5.8e-195 684.5 459 68.8
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 3.8e-194 681.8 458 68.8
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 9.3e-193 677.2 461 67.0
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 2.3e-191 672.5 457 66.7
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 6.6e-191 671.0 459 67.1
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 3.8e-186 655.2 468 64.1
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 6.4e-186 654.4 462 65.2
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 4.2e-185 651.7 462 65.2
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 1.0e-183 647.1 459 66.9
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 6.7e-183 644.4 468 64.5
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 1.9e-182 642.9 502 63.5
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 4.3e-182 641.7 459 65.6
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 4.3e-182 641.7 424 69.3
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 9.6e-182 640.6 461 64.4
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 1.6e-181 639.8 458 65.1
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 1.6e-181 639.8 458 64.6
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 2.1e-181 639.4 457 65.6
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 4.8e-181 638.3 457 64.1
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 1.1e-180 637.1 459 65.1
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 2.4e-180 636.0 454 63.7
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 3.1e-180 635.6 457 64.8
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 4.0e-180 635.2 458 63.3
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 5.3e-180 634.8 457 63.7
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.3e-178 630.2 460 63.3
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 4.9e-178 628.2 459 62.3
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 1.1e-177 627.1 440 67.5
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 2.4e-177 625.9 459 62.1
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.4e-177 625.9 468 61.8
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 4.2e-177 625.2 477 61.4
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 2.1e-176 622.9 460 63.5
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 1.8e-175 619.8 491 59.7
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 5.1e-175 618.2 468 61.8
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 1.6e-173 613.2 415 68.7
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.4e-172 610.1 461 61.8
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 2.4e-172 609.4 457 60.0
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 3.4e-171 605.5 462 61.3
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 2.9e-170 602.4 457 60.4
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 3.8e-170 602.1 497 61.0
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 6.5e-170 601.3 458 60.0
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 8.4e-170 600.9 459 60.3
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 3.2e-169 599.0 475 59.6
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 5.1e-167 591.7 462 60.4
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 6.7e-167 591.3 460 58.3
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 2.5e-166 589.3 460 58.0
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 4.1e-164 582.0 467 59.1
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 1.5e-163 580.1 439 60.1
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 7.7e-163 577.8 459 57.5
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 7.7e-163 577.8 459 57.5
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 5.0e-162 575.1 485 55.7
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 1.4e-161 573.5 344 75.3
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 7.2e-161 571.2 465 56.8
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 1.6e-160 570.1 481 55.3
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 1.6e-160 570.1 349 72.5
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 6.1e-160 568.2 484 55.0
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.2e-157 559.7 440 59.8
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 3.4e-155 552.4 514 54.9
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 7.2e-153 544.7 420 61.0
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 1.6e-152 543.5 373 69.2
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 2.7e-152 542.7 393 62.1
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 2.2e-149 533.1 413 61.3
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 8.2e-149 531.2 539 49.2
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 3.4e-147 525.8 459 56.2
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 3.4e-147 525.8 344 69.5
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 5.9e-147 525.0 575 48.7
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 3.0e-143 512.7 473 53.3
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 6.3e-141 505.0 507 49.5
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 6.3e-141 505.0 552 48.9
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 7.0e-140 501.5 397 59.2
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 1.5e-137 493.8 347 63.4
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 1.9e-137 493.4 376 63.3
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 4.7e-136 488.8 388 60.1
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 1.7e-130 470.3 369 61.0
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 2.7e-128 463.0 338 65.4
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 4.4e-126 455.7 376 58.5
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 1.6e-123 447.2 397 54.2
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 2.8e-117 426.4 412 51.5
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 5.0e-114 415.6 467 48.8
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 1.4e-111 407.5 456 46.7
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 7.0e-100 368.6 300 60.3
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 9.2e-100 368.2 421 46.8
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 4.0e-95 352.8 195 77.4
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 1.5e-94 350.9 218 74.3
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 6.0e-91 339.0 459 41.2
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 3.3e-89 333.2 258 58.9
Haze_25433 Corylus avellana HOM05D006254 ORTHO05D007409 3.1e-87 326.6 242 64.0
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 4.0e-87 326.2 263 58.6
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 1.3e-85 321.2 259 58.3
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 7.8e-83 312.0 297 53.9
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 2.3e-82 310.5 500 37.8
Haze_25436 Corylus avellana HOM05D006254 ORTHO05D007409 2.4e-79 300.4 211 66.8
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 3.0e-74 283.5 166 72.9
Migut.H00787 Erythranthe guttata HOM05D006254 ORTHO05D007409 2.6e-70 270.4 224 60.3
Lj4g0022315 Lotus japonicus HOM05D006254 ORTHO05D007409 7.6e-70 268.9 222 59.0
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 7.9e-67 258.8 495 31.9
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 4.8e-64 249.6 156 68.6
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 4.0e-63 246.5 156 67.9
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 2.5e-57 227.3 349 35.0
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 3.8e-45 186.8 252 42.1
HanXRQChr02g0035161 Helianthus annuus HOM05D006254 ORTHO05D007409 5.0e-45 186.4 108 82.4
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 8.5e-45 185.7 252 42.1
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 2.8e-40 170.6 179 47.5
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 2.4e-39 167.5 302 33.1
SEGI_09568 Sequoiadendron giganteum HOM05D006254 ORTHO05D007409 3.1e-39 167.2 233 40.3
HanXRQChr13g0399511 Helianthus annuus HOM05D006254 ORTHO05D007409 2.6e-38 164.1 96 83.3
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 8.8e-34 149.1 88 70.5
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 2.6e-33 147.5 78 76.9
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 4.1e-31 140.2 87 71.3
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 5.3e-31 139.8 374 28.3
BolC4t22792H Brassica oleracea HOM05D006254 ORTHO05D007409 1.7e-29 134.8 135 48.9
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 1.0e-26 125.6 124 51.6
MD11G1077000 Malus domestica HOM05D006254 ORTHO05D007409 3.9e-26 123.6 102 59.8
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 3.3e-25 120.6 68 69.1
ClCG04G002460 Citrullus lanatus HOM05D006254 ORTHO05D007409 1.4e-23 115.2 102 54.9
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 2.4e-23 114.4 66 71.2
AagrBONN_evm.TU.Sc2ySwM_228.4094 Anthoceros agrestis HOM05D006254 ORTHO05D007409 8.5e-21 105.9 270 28.5
PSO170G1462 Papaver somniferum HOM05D006254 ORTHO05D007409 5.5e-20 103.2 109 50.5
Glyma.08G005450 Glycine max HOM05D006254 ORTHO05D007409 1.0e-18 99.0 74 58.1
AagrBONN_evm.TU.Sc2ySwM_340.558 Anthoceros agrestis HOM05D002405 ORTHO05D002483 1.7e-16 91.7 219 26.9
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 2.9e-13 80.9 42 78.6
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea HOM05D006254 ORTHO05D007409 2.5e-12 77.8 86 48.8
Os08g0123300 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 8.0e-11 72.8 99 40.4
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 2.3e-10 71.2 54 57.4


User provided reference genes

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