Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 3.5e-68 261.5 136 100.0
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 4.3e-34 148.3 138 66.7
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 6.3e-25 117.9 137 51.8
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 2.0e-23 112.8 135 50.4
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 1.1e-21 107.1 134 48.5
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 7.2e-21 104.4 135 47.4
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 3.0e-19 99.0 127 45.7
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.1e-18 97.1 132 45.5
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 1.1e-18 97.1 131 45.0
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 3.3e-18 95.5 127 44.1
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 4.3e-18 95.1 118 50.8
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 2.8e-17 92.4 139 41.7
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 4.8e-17 91.7 139 41.0
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 6.3e-17 91.3 134 41.0
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 6.3e-17 91.3 134 41.0
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 6.3e-17 91.3 131 40.5
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 1.8e-16 89.7 133 41.4
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 2.4e-16 89.4 138 42.0
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 2.4e-16 89.4 135 39.3
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 6.9e-16 87.8 134 39.6
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 2.0e-15 86.3 130 40.8
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 2.6e-15 85.9 128 39.8
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.6e-15 85.9 130 38.5
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 3.4e-15 85.5 128 41.4
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 3.4e-15 85.5 128 41.4
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 3.4e-15 85.5 134 39.6
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 4.5e-15 85.1 125 40.8
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 4.5e-15 85.1 129 37.2
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 7.7e-15 84.3 135 37.8
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 7.7e-15 84.3 134 38.8
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 7.7e-15 84.3 134 37.3
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 1.0e-14 84.0 134 38.8
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 1.3e-14 83.6 134 34.3
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 2.9e-14 82.4 129 40.3
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 2.9e-14 82.4 135 40.0
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 2.9e-14 82.4 136 40.4
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 3.8e-14 82.0 132 38.6
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 3.8e-14 82.0 129 35.7
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 5.0e-14 81.6 135 37.8
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 5.0e-14 81.6 128 37.5
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 8.5e-14 80.9 135 37.8
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 8.5e-14 80.9 134 33.6
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 8.5e-14 80.9 135 37.8
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 8.5e-14 80.9 135 37.8
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.1e-13 80.5 135 37.8
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 1.1e-13 80.5 131 37.4
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 1.1e-13 80.5 129 34.9
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.4e-13 80.1 131 41.2
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 1.4e-13 80.1 120 42.5
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 1.4e-13 80.1 128 37.5
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 1.4e-13 80.1 135 37.0
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 1.9e-13 79.7 129 38.0
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 2.5e-13 79.3 138 38.4
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 2.5e-13 79.3 131 38.2
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 3.2e-13 79.0 138 38.4
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 3.2e-13 79.0 138 38.4
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 3.2e-13 79.0 139 38.8
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 3.2e-13 79.0 135 37.0
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 4.2e-13 78.6 129 34.9
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 5.5e-13 78.2 137 38.0
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 7.2e-13 77.8 130 36.2
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 7.2e-13 77.8 131 39.7
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 9.4e-13 77.4 134 34.3
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 9.4e-13 77.4 135 37.0
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 1.6e-12 76.6 125 39.2
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 1.6e-12 76.6 136 34.6
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 2.7e-12 75.9 128 39.8
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 2.7e-12 75.9 131 34.4
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 2.7e-12 75.9 127 37.0
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 3.6e-12 75.5 131 34.4
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 3.6e-12 75.5 128 37.5
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 4.7e-12 75.1 126 38.9
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 7.9e-12 74.3 128 36.7
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 7.9e-12 74.3 128 36.7
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 7.9e-12 74.3 131 37.4
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 7.9e-12 74.3 128 35.9
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 1.0e-11 73.9 132 35.6
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 1.0e-11 73.9 131 35.1
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 2.3e-11 72.8 129 34.9
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 2.3e-11 72.8 126 38.9
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 3.0e-11 72.4 130 36.2
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 3.0e-11 72.4 131 35.9
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 6.7e-11 71.2 140 35.7
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 8.8e-11 70.9 140 35.0
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 1.1e-10 70.5 131 35.9
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 1.5e-10 70.1 127 35.4
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 2.0e-10 69.7 131 34.4
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 2.0e-10 69.7 116 37.9
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 2.0e-10 69.7 115 37.4
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 3.3e-10 68.9 131 34.4
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 4.4e-10 68.6 131 33.6
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 5.7e-10 68.2 131 34.4
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 5.7e-10 68.2 131 33.6
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 7.4e-10 67.8 114 37.7
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 9.7e-10 67.4 108 36.1
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 1.3e-09 67.0 139 33.8
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 1.7e-09 66.6 131 32.8
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 1.7e-09 66.6 131 32.8
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.7e-09 66.6 135 30.4
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.7e-09 66.6 133 34.6
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 2.2e-09 66.2 133 34.6
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 2.8e-09 65.9 132 33.3
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 7.0e-08 61.2 55 50.9
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 7.0e-08 61.2 55 50.9
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 9.1e-08 60.8 135 31.1
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.2e-07 60.5 59 50.8
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 5.9e-07 58.2 131 29.8
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 5.0e-06 55.1 134 24.6


User provided reference genes

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