Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 5.8e-239 830.5 418 100.0
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 5.5e-197 691.0 403 84.4
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 6.8e-179 630.9 390 79.7
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 4.1e-176 621.7 392 76.5
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 3.5e-175 618.6 420 73.6
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.3e-174 616.7 419 72.6
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.5e-173 613.2 407 74.9
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 5.5e-173 611.3 397 76.3
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.7e-172 609.0 406 74.4
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 3.6e-172 608.6 404 73.0
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 1.0e-171 607.1 400 76.0
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 5.2e-171 604.7 402 74.1
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 6.8e-171 604.4 403 73.9
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 1.5e-170 603.2 420 72.1
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 3.4e-170 602.1 403 74.2
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.3e-169 600.1 400 74.5
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 2.8e-169 599.0 390 75.6
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 2.8e-169 599.0 403 73.4
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 8.3e-169 597.4 400 72.5
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 1.1e-168 597.0 391 74.7
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.4e-168 596.7 407 73.7
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.4e-168 596.7 402 75.1
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 1.4e-168 596.7 405 74.1
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 1.4e-168 596.7 402 73.4
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 1.4e-168 596.7 404 74.0
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.8e-168 596.3 396 73.7
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 2.4e-168 595.9 393 73.8
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 5.4e-168 594.7 396 73.0
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 7.0e-168 594.3 390 74.9
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 7.0e-168 594.3 400 73.2
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 1.6e-167 593.2 400 72.0
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.6e-167 593.2 398 74.4
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.6e-167 593.2 401 72.1
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 1.6e-167 593.2 390 74.6
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 3.5e-167 592.0 394 71.6
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 5.9e-167 591.3 395 73.7
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 7.7e-167 590.9 397 72.8
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 7.7e-167 590.9 407 72.7
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 2.3e-166 589.3 419 71.4
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 2.9e-166 589.0 395 74.4
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 2.9e-166 589.0 395 73.7
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 5.0e-166 588.2 404 73.3
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 6.6e-166 587.8 404 72.8
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 8.6e-166 587.4 404 73.5
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 1.1e-165 587.0 390 75.9
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 1.1e-165 587.0 400 72.5
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 1.9e-165 586.3 415 71.1
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 2.5e-165 585.9 400 74.0
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 1.2e-164 583.6 404 72.0
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.1e-164 582.8 400 73.0
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.8e-164 582.4 400 73.5
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.0e-163 580.5 403 71.5
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 1.4e-163 580.1 401 69.6
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 2.3e-163 579.3 402 71.6
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 3.4e-162 575.5 400 70.2
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.3e-161 573.5 403 71.0
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 6.4e-161 571.2 403 71.0
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 1.1e-160 570.5 419 70.4
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 1.1e-160 570.5 403 69.5
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 2.4e-160 569.3 402 71.1
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 3.2e-160 568.9 387 72.6
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.2e-159 567.0 400 69.5
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 1.6e-159 566.6 403 70.7
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 2.0e-159 566.2 386 72.5
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 5.9e-159 564.7 412 68.4
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 7.8e-159 564.3 459 63.6
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 1.3e-158 563.5 362 78.5
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 1.3e-158 563.5 390 71.3
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 2.3e-158 562.8 403 70.0
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 9.5e-157 557.4 387 71.8
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 1.6e-156 556.6 400 70.5
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.6e-156 556.6 422 66.4
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 4.0e-155 552.0 396 68.7
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 5.2e-155 551.6 485 58.8
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 2.0e-154 549.7 400 67.0
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 5.8e-154 548.1 399 69.4
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 1.9e-152 543.1 374 72.2
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 7.0e-152 541.2 428 66.4
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 9.2e-152 540.8 400 67.5
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 2.7e-151 539.3 390 67.4
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 6.0e-151 538.1 397 68.3
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 2.3e-150 536.2 400 68.5
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 2.3e-150 536.2 401 65.3
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 3.1e-147 525.8 405 67.2
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 5.8e-146 521.5 385 66.2
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 1.4e-144 516.9 396 65.4
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 1.4e-144 516.9 396 65.4
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 7.1e-144 514.6 343 75.2
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 9.2e-144 514.2 348 75.0
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 6.6e-142 508.1 392 65.1
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 3.3e-141 505.8 399 62.7
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.8e-139 500.0 334 76.9
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 4.9e-137 491.9 322 77.0
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 6.0e-135 485.0 389 63.8
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 2.6e-130 469.5 329 72.3
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 3.2e-128 462.6 393 59.3
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 2.6e-122 443.0 402 59.7
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 4.9e-121 438.7 320 70.0
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 6.0e-111 405.2 387 58.4
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 4.3e-109 399.1 377 58.9
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 9.6e-109 397.9 301 65.8
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.8e-107 393.7 389 54.2
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 1.9e-104 383.6 314 66.2
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 3.4e-98 362.8 253 74.3
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.6e-90 336.7 352 55.4
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 7.7e-90 335.1 383 47.5
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.8e-81 306.2 195 81.0
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 4.2e-80 302.8 219 66.7
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 2.1e-79 300.4 187 82.4
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 1.4e-75 287.7 381 45.7
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 1.7e-65 254.2 389 40.1
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 2.9e-49 200.3 118 78.8
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.3e-48 196.8 112 83.0
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 8.9e-46 188.7 109 80.7
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-40 171.8 96 83.3
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.3e-40 169.9 96 82.3
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.2e-38 162.9 96 79.2
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.1e-34 151.0 104 74.0
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 7.8e-34 149.1 95 70.5
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 1.6e-26 124.8 73 76.7
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 4.6e-26 123.2 73 75.3
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.9e-25 120.2 88 64.8
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 2.8e-23 114.0 61 82.0
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 6.8e-22 109.4 66 72.7
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 8.9e-22 109.0 79 59.5
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 4.4e-21 106.7 61 78.7
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 6.0e-18 96.3 49 83.7
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 2.5e-16 90.9 94 53.2
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 2.8e-15 87.4 67 62.7
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 3.6e-15 87.0 104 54.8
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 1.1e-14 85.5 51 76.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 6.9e-14 82.8 41 85.4
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 3.5e-10 70.5 41 73.2


User provided reference genes

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