Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 1.5e-286 988.8 494 100.0
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 1.6e-147 526.9 355 73.2
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 3.5e-142 509.2 360 68.9
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 1.5e-132 477.2 353 66.0
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 1.5e-132 477.2 361 64.5
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 7.3e-132 474.9 350 66.0
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 3.6e-131 472.6 360 64.4
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 6.2e-131 471.9 350 65.4
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 5.2e-130 468.8 361 64.5
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 1.5e-129 467.2 354 63.6
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 2.6e-129 466.5 350 65.1
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 3.4e-129 466.1 354 63.0
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 4.4e-129 465.7 361 63.2
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 1.3e-128 464.2 359 62.7
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 2.4e-127 459.9 361 62.6
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 3.2e-127 459.5 351 64.1
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 3.2e-127 459.5 353 64.9
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 3.2e-127 459.5 359 63.5
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 4.2e-127 459.1 362 62.7
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 5.4e-127 458.8 360 62.5
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 5.4e-127 458.8 361 62.6
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 1.2e-126 457.6 354 64.7
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 4.6e-126 455.7 352 61.1
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 4.6e-126 455.7 356 62.9
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 4.6e-126 455.7 353 62.0
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 7.8e-126 454.9 361 62.3
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 7.8e-126 454.9 361 60.7
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 1.0e-125 454.5 361 61.8
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 1.0e-125 454.5 434 54.8
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 1.3e-125 454.1 355 61.7
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 1.7e-125 453.8 360 61.4
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 2.3e-125 453.4 361 60.9
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 3.0e-125 453.0 359 62.4
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 3.9e-125 452.6 359 61.6
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 3.9e-125 452.6 354 62.1
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 6.6e-125 451.8 357 60.8
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 8.7e-125 451.4 359 61.6
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 2.5e-124 449.9 349 62.5
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 3.3e-124 449.5 350 62.6
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 4.3e-124 449.1 357 60.5
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 1.3e-123 447.6 358 62.6
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 2.8e-123 446.4 354 60.7
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 3.6e-123 446.0 358 62.3
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 4.8e-123 445.7 395 58.2
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 1.1e-122 444.5 354 61.3
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 1.1e-122 444.5 355 62.5
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 1.4e-122 444.1 352 61.1
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 1.4e-122 444.1 361 59.8
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 1.8e-122 443.7 361 57.6
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 2.4e-122 443.4 354 62.4
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 4.0e-122 442.6 395 58.0
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 5.8e-121 438.7 354 59.3
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 5.8e-121 438.7 354 59.0
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 2.2e-120 436.8 353 61.5
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 2.9e-120 436.4 355 59.7
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 6.4e-120 435.3 354 60.2
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 1.1e-119 434.5 347 60.5
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 1.1e-119 434.5 356 59.0
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 5.4e-119 432.2 356 59.0
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 7.1e-119 431.8 354 57.3
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 1.2e-118 431.0 354 56.5
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 1.6e-118 430.6 368 57.9
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 2.7e-118 429.9 357 60.8
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 1.0e-117 427.9 354 57.6
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 1.1e-116 424.5 350 58.6
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 4.8e-115 419.1 354 61.6
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 5.3e-114 415.6 351 58.1
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 3.8e-112 409.5 351 59.8
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 6.4e-112 408.7 354 55.6
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 2.7e-110 403.3 356 56.5
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 3.5e-110 402.9 279 70.3
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 3.9e-109 399.4 354 58.2
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 8.7e-109 398.3 361 54.3
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 1.5e-108 397.5 356 56.5
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 2.8e-107 393.3 314 58.0
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 1.4e-106 391.0 355 56.1
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 1.4e-106 391.0 355 55.8
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 1.4e-106 391.0 355 55.8
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 1.4e-106 391.0 355 56.1
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 1.8e-106 390.6 349 55.0
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 5.3e-106 389.0 381 52.8
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 1.2e-105 387.9 406 50.5
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 5.8e-105 385.6 395 50.9
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 1.1e-103 381.3 357 54.3
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 1.9e-103 380.6 349 53.0
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 9.3e-103 378.3 403 49.6
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 4.6e-102 375.9 403 50.6
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 1.3e-101 374.4 268 65.3
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 1.1e-100 371.3 354 50.3
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 1.1e-100 371.3 409 49.9
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 2.2e-99 367.1 396 50.0
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 1.4e-98 364.4 354 51.7
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 1.0e-96 358.2 359 50.4
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 5.0e-96 355.9 375 48.8
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 3.9e-93 346.3 355 48.5
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 8.8e-93 345.1 355 53.2
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 1.5e-92 344.4 402 47.3
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 9.7e-92 341.7 297 52.5
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 1.0e-85 321.6 407 46.2
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 1.0e-85 321.6 407 46.2
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 6.3e-83 312.4 357 43.7
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 5.3e-82 309.3 210 71.4
RcHm_v2.0_Chr6g0255981 Rosa chinensis HOM05D002030 ORTHO05D007413 2.6e-81 307.0 248 58.9
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 5.5e-79 299.3 336 47.6
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 9.4e-79 298.5 208 69.7
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 8.8e-77 292.0 227 60.8
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 1.2e-70 271.6 329 42.6
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 4.8e-67 259.6 262 50.0
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 2.0e-65 254.2 192 64.1
PSO478G2842 Papaver somniferum HOM05D002030 ORTHO05D007413 5.0e-64 249.6 259 53.7
HanXRQChr14g0432371 Helianthus annuus HOM05D002030 ORTHO05D007413 1.1e-63 248.4 263 51.0
Nitab4.5_0001515g0060 Nicotiana tabacum HOM05D002030 ORTHO05D007413 6.8e-61 239.2 176 63.1
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 7.0e-50 202.6 315 40.6
BcaC01g05781 Brassica carinata HOM05D002030 ORTHO05D007413 7.3e-39 166.0 117 66.7
MD00G1154100 Malus domestica HOM05D002030 ORTHO05D007413 4.0e-37 160.2 126 56.3
CSS0011008 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 8.3e-35 152.5 155 52.3
FAN21G2573 Fragaria x ananassa HOM05D002030 ORTHO05D007413 1.6e-33 148.3 162 48.8
BcaC01g05780 Brassica carinata HOM05D002030 ORTHO05D007413 1.1e-21 109.0 114 46.5
Glyma.10G199232 Glycine max HOM05D002030 ORTHO05D007413 6.8e-21 106.3 150 38.7
ECA247G0622 Erigeron canadensis HOM05D024591 ORTHO05D007413 2.6e-20 104.4 69 82.6
Nitab4.5_0001515g0100 Nicotiana tabacum HOM05D002030 ORTHO05D007413 3.8e-19 100.5 62 67.7
COL.COLO4_19604 Corchorus olitorius HOM05D002030 ORTHO05D007413 3.5e-17 94.0 92 54.3
Sc16g0005130 Simmondsia chinensis HOM05D002030 ORTHO05D007413 3.6e-14 84.0 101 42.6
Atru.chr1.1605 Acer truncatum HOM05D002030 ORTHO05D007413 6.2e-14 83.2 73 56.2
Medtr4g132950 Medicago truncatula HOM05D002030 ORTHO05D007413 6.9e-13 79.7 80 50.0
DCAR_031631 Daucus carota HOM05D002030 ORTHO05D007413 1.1e-10 72.4 67 53.7
ECA238G0984 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.2e-10 70.9 76 57.9
ECA248G1864 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.4e-10 70.1 79 57.0
ECA246G2834 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-09 68.6 77 55.8
ECA234G3458 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-09 67.0 72 55.6
ECA232G2482 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.0e-09 66.6 69 60.9
ECA236G0091 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.0e-08 65.9 72 55.6
ECA246G3956 Erigeron canadensis HOM05D000017 ORTHO05D008278 1.7e-08 65.1 70 60.0
ECA240G2642 Erigeron canadensis HOM05D024591 ORTHO05D007413 2.3e-08 64.7 86 48.8
ECA246G0912 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.3e-08 64.7 79 54.4
ECA234G4590 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.0e-08 64.3 70 54.3
ECA246G4649 Erigeron canadensis HOM05D000014 ORTHO05D000093 5.1e-08 63.5 74 55.4
ECA247G0664 Erigeron canadensis HOM05D000006 ORTHO05D000091 5.1e-08 63.5 111 45.0
ECA246G1036 Erigeron canadensis HOM05D000006 ORTHO05D000091 6.6e-08 63.2 70 54.3
ECA247G2952 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.3e-06 58.9 53 66.0
Solyc12g010650.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 1.6e-06 58.5 42 57.1
vmacro05339 Vaccinium macrocarpon HOM05D002030 ORTHO05D007413 3.6e-06 57.4 72 45.8


User provided reference genes

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