Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 7.7e-99 364.0 208 100.0
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 3.4e-30 136.0 187 47.1
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 2.8e-24 116.3 204 51.5
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 1.9e-20 103.6 197 40.6
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 3.2e-20 102.8 157 45.2
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 2.7e-19 99.8 210 38.1
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 4.6e-19 99.0 166 42.2
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 1.8e-15 87.0 176 38.6
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.2e-14 84.3 165 40.6
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.2e-14 84.3 188 34.0
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 1.2e-14 84.3 178 34.8
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 4.5e-14 82.4 152 40.1
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 4.5e-14 82.4 52 71.2
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 4.9e-13 79.0 156 35.9
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 8.4e-13 78.2 161 36.0
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 1.4e-12 77.4 145 39.3
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 1.4e-12 77.4 200 35.0
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 3.2e-12 76.3 145 35.9
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 3.2e-12 76.3 175 38.3
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 4.2e-12 75.9 149 36.2
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 7.1e-12 75.1 209 31.1
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 1.2e-11 74.3 150 36.7
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 1.2e-11 74.3 148 34.5
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.2e-11 74.3 161 35.4
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 1.6e-11 73.9 159 35.2
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 1.6e-11 73.9 149 35.6
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 2.1e-11 73.6 170 35.3
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 2.1e-11 73.6 155 39.4
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.5e-11 72.8 223 30.0
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 3.5e-11 72.8 156 37.8
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.6e-11 72.4 183 32.8
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 4.6e-11 72.4 151 35.8
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 4.6e-11 72.4 156 35.9
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 7.9e-11 71.6 223 29.6
Lsat_1_v5_gn_6_32400 Lactuca sativa HOM05D004206 ORTHO05D003325 7.9e-11 71.6 58 58.6
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 1.3e-10 70.9 176 33.5
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.0e-10 69.7 165 32.7
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 3.0e-10 69.7 110 42.7
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 3.9e-10 69.3 156 36.5
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 6.7e-10 68.6 195 36.4
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.5e-09 67.4 55 61.8
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 1.5e-09 67.4 97 43.3
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.5e-09 67.4 149 37.6
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 1.5e-09 67.4 171 30.4
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 1.5e-09 67.4 150 37.3
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.9e-09 67.0 100 39.0
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.9e-09 67.0 52 61.5
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 1.9e-09 67.0 107 38.3
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 4.3e-09 65.9 55 60.0
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 4.3e-09 65.9 181 33.1
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 5.6e-09 65.5 55 58.2
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 5.6e-09 65.5 100 43.0
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 7.4e-09 65.1 79 48.1
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 7.4e-09 65.1 88 45.5
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 7.4e-09 65.1 153 35.9
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 7.4e-09 65.1 55 56.4
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 9.6e-09 64.7 173 32.9
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.6e-08 63.9 55 56.4
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.6e-08 63.9 51 60.8
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 1.6e-08 63.9 130 38.5
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 2.1e-08 63.5 169 32.5
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 2.1e-08 63.5 162 32.7
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 2.1e-08 63.5 195 29.2
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 2.8e-08 63.2 79 45.6
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 2.8e-08 63.2 55 58.2
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 2.8e-08 63.2 136 36.0
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.8e-08 63.2 151 33.8
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.8e-08 63.2 161 32.3
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 3.7e-08 62.8 53 64.2
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 3.7e-08 62.8 49 65.3
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 4.8e-08 62.4 41 73.2
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 4.8e-08 62.4 87 43.7
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 6.2e-08 62.0 124 33.1
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 8.1e-08 61.6 165 35.2
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 8.1e-08 61.6 204 31.9
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.1e-08 61.6 49 61.2
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 8.1e-08 61.6 49 61.2
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 8.1e-08 61.6 46 65.2
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 1.1e-07 61.2 52 59.6
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.1e-07 61.2 143 37.8
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 1.1e-07 61.2 51 58.8
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.4e-07 60.8 45 64.4
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 1.4e-07 60.8 59 47.5
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 1.4e-07 60.8 52 59.6
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 1.4e-07 60.8 104 41.3
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 1.4e-07 60.8 50 68.0
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.8e-07 60.5 52 57.7
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 1.8e-07 60.5 90 43.3
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 2.4e-07 60.1 188 31.4
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.4e-07 60.1 55 60.0
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 3.1e-07 59.7 100 39.0
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.0e-07 59.3 49 57.1
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 4.0e-07 59.3 49 57.1
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 4.0e-07 59.3 55 56.4
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 5.3e-07 58.9 145 33.1
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 5.3e-07 58.9 55 58.2
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 5.3e-07 58.9 103 39.8
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 5.3e-07 58.9 103 39.8
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 5.3e-07 58.9 153 32.0
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 5.3e-07 58.9 67 52.2
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 5.3e-07 58.9 202 32.7
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 6.9e-07 58.5 98 38.8
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.9e-07 58.5 100 39.0
Lsat_1_v5_gn_2_110560 Lactuca sativa HOM05D000437 ORTHO05D003325 6.9e-07 58.5 38 65.8
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 6.9e-07 58.5 104 39.4
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 9.0e-07 58.2 52 55.8
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 9.0e-07 58.2 151 31.1
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.2e-06 57.8 97 41.2
Eucgr.A01242 Eucalyptus grandis HOM05D004206 ORTHO05D003325 1.2e-06 57.8 55 49.1
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 1.2e-06 57.8 49 63.3
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 1.2e-06 57.8 46 63.0
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 1.5e-06 57.4 85 41.2
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 1.5e-06 57.4 52 55.8
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.0e-06 57.0 43 65.1
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 2.0e-06 57.0 55 56.4
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 2.6e-06 56.6 45 60.0
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 3.4e-06 56.2 55 45.5
Rhsim13G0085900 Rhododendron simsii HOM05D004206 ORTHO05D003325 3.4e-06 56.2 132 34.1
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 4.5e-06 55.8 173 31.2
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.5e-06 55.8 52 50.0
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 4.5e-06 55.8 43 65.1
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 4.5e-06 55.8 43 62.8
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 5.8e-06 55.5 177 27.1
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 5.8e-06 55.5 52 50.0
Hma1.2p1_1004F.1_g246870 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 5.8e-06 55.5 45 60.0
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 5.8e-06 55.5 45 60.0
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 5.8e-06 55.5 104 36.5
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 7.6e-06 55.1 52 53.8
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 7.6e-06 55.1 52 55.8


User provided reference genes

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