Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 0.0e+00 2362.8 1208 100.0
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 0.0e+00 1501.1 1119 73.5
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 0.0e+00 1303.5 1141 63.6
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1129.8 1156 55.4
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1099.0 1166 53.9
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1093.2 1172 54.4
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1091.6 1172 54.4
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1091.6 1172 53.4
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1090.1 1175 53.4
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1090.1 1149 53.1
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1086.6 1168 53.3
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1085.5 1177 53.8
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1084.3 1163 52.7
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 0.0e+00 1083.9 1170 55.1
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1083.9 1161 52.6
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1083.6 1175 53.1
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1082.8 1162 53.4
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1077.4 1161 52.5
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 8.6e-312 1074.3 1174 53.1
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.0e-310 1070.5 1229 50.5
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 1.7e-310 1069.7 1192 52.5
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 3.8e-310 1068.5 1161 53.5
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.1e-309 1067.0 1183 53.8
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 1.4e-309 1066.6 1175 52.8
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 2.5e-309 1065.8 1167 52.6
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 1.2e-308 1063.5 1189 53.2
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.0e-307 1058.9 1213 50.4
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 3.9e-307 1058.5 1173 53.5
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 2.8e-305 1052.4 1181 53.3
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 4.8e-305 1051.6 1171 52.1
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 1.8e-304 1049.7 1167 53.0
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 1.2e-303 1047.0 1173 53.0
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 3.8e-302 1042.0 1079 56.1
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 8.5e-302 1040.8 1238 51.5
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 1.6e-300 1036.6 1172 51.3
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 6.1e-300 1034.6 1163 53.2
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 1.8e-299 1033.1 1172 51.0
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 8.8e-299 1030.8 1188 51.7
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 7.4e-298 1027.7 1000 59.2
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 2.5e-293 1012.7 1160 51.6
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 2.1e-292 1009.6 1172 50.2
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 4.7e-292 1008.4 1165 50.6
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 1.8e-291 1006.5 1174 50.3
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 5.2e-291 1005.0 1165 50.5
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 1.1e-288 997.3 1170 50.4
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 7.0e-288 994.6 1172 50.1
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 9.1e-288 994.2 1182 50.8
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 9.1e-288 994.2 1163 50.0
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.0e-286 990.7 1169 50.0
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 6.5e-286 988.0 1167 50.1
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 2.5e-285 986.1 1165 50.6
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 5.2e-283 978.4 1160 50.5
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 1.3e-281 973.8 1163 50.0
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 1.1e-280 970.7 1102 52.1
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 2.6e-274 949.5 1188 48.3
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 7.5e-274 948.0 1223 47.6
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 9.8e-274 947.6 1169 49.6
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 1.7e-273 946.8 1161 49.4
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 8.3e-273 944.5 1165 49.4
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 8.3e-273 944.5 1166 49.7
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 3.5e-271 939.1 1133 50.0
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 7.8e-271 937.9 1151 48.7
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.3e-270 937.2 1227 48.0
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 2.3e-270 936.4 1153 48.7
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 1.1e-269 934.1 1184 48.7
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 5.2e-267 925.2 1177 49.2
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 2.7e-263 912.9 1185 47.9
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 4.6e-263 912.1 1155 48.0
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.7e-262 910.2 1172 47.7
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 8.6e-262 907.9 1175 49.0
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 5.6e-261 905.2 1145 46.6
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 3.1e-259 899.4 1119 50.0
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 2.4e-248 863.2 1185 45.3
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 3.0e-246 856.3 1132 45.1
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 3.3e-245 852.8 1171 45.8
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 2.1e-239 833.6 1045 48.6
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 4.8e-236 822.4 765 60.7
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.4e-227 794.3 1094 46.8
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 7.6e-226 788.5 1028 48.6
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 5.6e-221 772.3 1164 45.1
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 1.3e-214 751.1 1223 40.9
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.7e-209 734.2 741 55.9
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 5.0e-209 732.6 1150 42.1
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 5.1e-206 722.6 1161 42.7
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 8.2e-204 715.3 1011 43.8
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 1.2e-186 658.3 956 43.5
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 1.4e-182 644.8 762 51.7
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 2.2e-169 600.9 1161 38.6
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 1.1e-155 555.4 1145 35.3
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 5.6e-152 543.1 1200 34.7
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 1.2e-146 525.4 607 48.8
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 9.2e-131 472.6 1230 33.2
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 6.2e-127 459.9 1125 34.2
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 7.6e-117 426.4 616 45.6
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 6.5e-100 370.2 369 55.8
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 5.1e-81 307.4 385 44.9
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 1.8e-70 272.3 437 43.9
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.1e-62 246.5 508 36.4
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.5e-59 235.3 382 39.8
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 1.0e-57 229.9 1125 26.0
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 4.6e-29 134.8 257 33.9
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.8e-25 122.9 211 40.8
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.0e-25 121.7 86 62.8
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 1.3e-23 116.7 121 51.2
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 2.2e-23 115.9 95 58.9
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 8.3e-23 114.0 92 56.5
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 7.1e-22 110.9 70 70.0
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 2.7e-21 109.0 117 51.3
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 1.7e-20 106.3 125 48.8
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 5.6e-19 101.3 107 53.3
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 8.9e-17 94.0 115 50.4
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 9.2e-14 84.0 267 28.1
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.7e-12 79.7 72 55.6
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 7.1e-06 57.8 74 39.2


User provided reference genes

Program Settings