Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2612 Erigeron canadensis HOM05D000263 ORTHO05D188991 5.2e-81 304.3 151 100.0
HanXRQChr06g0179401 Helianthus annuus HOM05D000263 ORTHO05D000213 4.5e-08 62.0 68 57.4
HanXRQChr10g0308521 Helianthus annuus HOM05D000263 ORTHO05D000213 4.5e-08 62.0 69 56.5
Lsat_1_v5_gn_5_85480 Lactuca sativa HOM05D000263 ORTHO05D000213 4.5e-08 62.0 68 57.4
ECA236G2277 Erigeron canadensis HOM05D000263 ORTHO05D000213 7.7e-08 61.2 68 55.9
HanXRQChr05g0142281 Helianthus annuus HOM05D000263 ORTHO05D000213 7.7e-08 61.2 68 55.9
ECA234G4755 Erigeron canadensis HOM05D000263 ORTHO05D000213 1.3e-07 60.5 68 57.4
Lsat_1_v5_gn_8_68180 Lactuca sativa HOM05D000263 ORTHO05D000213 1.7e-07 60.1 68 55.9
HPP92_010325 Vanilla planifolia HOM05D000263 ORTHO05D000213 1.7e-07 60.1 68 55.9
Lju50C9T1 Lonicera japonica HOM05D000263 ORTHO05D000213 2.2e-07 59.7 68 54.4
HanXRQChr12g0358351 Helianthus annuus HOM05D000263 ORTHO05D000213 2.9e-07 59.3 69 55.1
Actinidia29949 Actinidia chinensis HOM05D000263 ORTHO05D000213 3.8e-07 58.9 68 52.9
Rhsim01G0001900 Rhododendron simsii HOM05D000263 ORTHO05D000213 3.8e-07 58.9 68 54.4
vmacro13144 Vaccinium macrocarpon HOM05D000263 ORTHO05D000213 3.8e-07 58.9 68 54.4
Haze_21946 Corylus avellana HOM05D000263 ORTHO05D000213 5.0e-07 58.5 68 55.9
Eucgr.C02386 Eucalyptus grandis HOM05D000263 ORTHO05D000213 5.0e-07 58.5 68 52.9
Actinidia38493 Actinidia chinensis HOM05D000263 ORTHO05D000213 6.5e-07 58.2 68 52.9
Lj7C750T5 Lonicera japonica HOM05D000263 ORTHO05D000213 6.5e-07 58.2 68 54.4
Dinv41220 Davidia involucrata HOM05D000263 ORTHO05D000213 8.5e-07 57.8 68 51.5
QL12p025090 Quercus lobata HOM05D000263 ORTHO05D000213 8.5e-07 57.8 68 54.4
Sc14g0001310 Simmondsia chinensis HOM05D000263 ORTHO05D000213 8.5e-07 57.8 77 50.6
TAR628G1653 Trochodendron aralioides HOM05D000263 ORTHO05D000213 8.5e-07 57.8 69 53.6
HPP92_018372 Vanilla planifolia HOM05D000263 ORTHO05D000213 8.5e-07 57.8 68 54.4
Atru.chr7.848 Acer truncatum HOM05D000263 ORTHO05D000213 1.1e-06 57.4 68 52.9
Aqoxy7G02969 Aquilegia oxysepala HOM05D000263 ORTHO05D000213 1.1e-06 57.4 68 52.9
Duzib168G0970 Durio zibethinus HOM05D000263 ORTHO05D000213 1.1e-06 57.4 68 52.9
VMungo1309G0278 Vigna mungo HOM05D000263 ORTHO05D000213 1.1e-06 57.4 68 52.9
Actinidia38689 Actinidia chinensis HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 52.9
ATR0580G422 Amborella trichopoda HOM05D000263 ORTHO05D000213 1.5e-06 57.0 69 52.2
arahy.Tifrunner.gnm1.ann1.66S7FV Arachis hypogaea HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 52.9
ClCG11G012000 Citrullus lanatus HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 51.5
MELO3C004004.2 Cucumis melo HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 51.5
CsaV3_2G008520 Cucumis sativus L. HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 51.5
Manes.14G156300 Manihot esculenta HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 52.9
Phvul.009G239000 Phaseolus vulgaris HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 52.9
Sed0004009 Sechium edule HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 52.9
Sed0012255 Sechium edule HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 51.5
Sed0018616 Sechium edule HOM05D000263 ORTHO05D000213 1.5e-06 57.0 68 51.5
Atru.chr7.2635 Acer truncatum HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
arahy.Tifrunner.gnm1.ann1.JB3EIK Arachis hypogaea HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
Cpa.g.sc23.11 Carica papaya HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
ClCG08G012700 Citrullus lanatus HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
Ciclev10007368m.g Citrus clementina HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
MELO3C011192.2 Cucumis melo HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
CsaV3_2G031420 Cucumis sativus L. HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
Eucgr.C00140 Eucalyptus grandis HOM05D000263 ORTHO05D000213 1.9e-06 56.6 77 50.6
MBI14_g08142_MAGBIO Magnolia biondii HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 52.9
Potri.018G006000 Populus trichocarpa HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 51.5
RcHm_v2.0_Chr4g0400911 Rosa chinensis HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 51.5
SGA_v2.0_scaffold69G23242 Striga asiatica HOM05D000263 ORTHO05D000213 1.9e-06 56.6 68 51.5
Actinidia01300 Actinidia chinensis HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 51.5
EL10Ac2g03747 Beta vulgaris HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 51.5
FAN15G1933 Fragaria x ananassa HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 51.5
FAN27G1217 Fragaria x ananassa HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 51.5
Lj4g0010601 Lotus japonicus HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 52.9
Manes.06G022300 Manihot esculenta HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 52.9
Medtr1g009760 Medicago truncatula HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 54.4
Oeu029911.1 Olea europaea HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 52.9
RcHm_v2.0_Chr6g0304901 Rosa chinensis HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 51.5
TWI34G0340 Tripterygium wilfordii HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 52.9
vmacro06004 Vaccinium macrocarpon HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 51.5
vmacro06099 Vaccinium macrocarpon HOM05D000263 ORTHO05D000213 2.5e-06 56.2 68 52.9
Atru.chr10.2390 Acer truncatum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
arahy.Tifrunner.gnm1.ann1.1IW9Y2 Arachis hypogaea HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
arahy.Tifrunner.gnm1.ann1.SIB906 Arachis hypogaea HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
CANSAT11G0942 Cannabis sativa HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
CANSAT21G0557 Cannabis sativa HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
CANSAT25G2920 Cannabis sativa HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Cfa013265 Carpinus fangiana HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Haze_21729 Corylus avellana HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
DCAR_020129 Daucus carota HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Glyma.09G056300 Glycine max HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Glyma.15G162600 Glycine max HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Gohir.A05G004000 Gossypium hirsutum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Gohir.A05G064700 Gossypium hirsutum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Gohir.A05G120700 Gossypium hirsutum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Gohir.D05G004400 Gossypium hirsutum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Gohir.D05G067300 Gossypium hirsutum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Gorai.009G004200 Gossypium raimondii HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Gorai.009G068100 Gossypium raimondii HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Gorai.009G125200 Gossypium raimondii HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Nn8g40528 Nelumbo nucifera HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
Prupe.1G460700 Prunus persica HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
PGR044G0035 Punica granatum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
PGR142G0086 Punica granatum HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
THA.LOC104817787 Tarenaya hassleriana HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
THA.LOC104819973 Tarenaya hassleriana HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 51.5
GSVIVG01016862001 Vitis vinifera HOM05D000263 ORTHO05D000213 3.2e-06 55.8 68 52.9
Cpa.g.sc1377.1 Carica papaya HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Ca_12867_v3 Cicer arietinum L. HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 52.9
COL.COLO4_26657 Corchorus olitorius HOM05D000263 ORTHO05D000213 4.2e-06 55.5 77 50.6
Dinv18886 Davidia involucrata HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
FvH4_2g36880 Fragaria vesca HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
FAN20G1098 Fragaria x ananassa HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Gohir.A08G019200 Gossypium hirsutum HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Gohir.D08G029800 Gossypium hirsutum HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Gorai.004G027300 Gossypium raimondii HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Lalb_Chr22g0361251 Lupinus albus HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 52.9
MD15G1108400 Malus domestica HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 52.9
Nn8g40646 Nelumbo nucifera HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
PSO063G0962 Papaver somniferum HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
PSO170G5469 Papaver somniferum HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Peaxi162Scf01054g00032 Petunia axillaris HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Potri.006G005900 Populus trichocarpa HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Prupe.1G082000 Prunus persica HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Solyc07g017780.4 Solanum lycopersicum HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Sopen07g006620 Solanum pennellii HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
PGSC0003DMG400004101 Solanum tuberosum HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
THA.LOC104803945 Tarenaya hassleriana HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
THA.LOC104813515 Tarenaya hassleriana HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 52.9
Thecc.09G174000 Theobroma cacao HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
TWI63G0285 Tripterygium wilfordii HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
TAR383G1063 Trochodendron aralioides HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 50.0
GSVIVG01029244001 Vitis vinifera HOM05D000263 ORTHO05D000213 4.2e-06 55.5 68 51.5
Zm00001eb432500 Zea mays HOM05D000263 ORTHO05D000213 4.2e-06 55.5 77 49.4
Atru.chr1.295 Acer truncatum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Ca_02034_v3 Cicer arietinum L. HOM05D000263 ORTHO05D000213 5.5e-06 55.1 67 52.2
ClCG06G013470 Citrullus lanatus HOM05D000263 ORTHO05D000213 5.5e-06 55.1 69 53.6
DCAR_009918 Daucus carota HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 50.0
Duzib150G0125 Durio zibethinus HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Duzib168G1778 Durio zibethinus HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Duzib170G0776 Durio zibethinus HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Gohir.D05G121700 Gossypium hirsutum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
Lj5C78T18 Lonicera japonica HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
Lj1g0028124 Lotus japonicus HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
Lalb_Chr13g0300121 Lupinus albus HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 50.0
MD08G1130200 Malus domestica HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
MD16G1254200 Malus domestica HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Medtr4g127710 Medicago truncatula HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
Nn2g12728 Nelumbo nucifera HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Nitab4.5_0000055g0200 Nicotiana tabacum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Nitab4.5_0001869g0010 Nicotiana tabacum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
PSO339G0876 Papaver somniferum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
PSO384G1795 Papaver somniferum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Psat4g012640 Pisum sativum HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
QL02p091781 Quercus lobata HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
SalBow4G2768 Salvia bowleyana HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
SGA_v2.0_scaffold66G22429 Striga asiatica HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
Thecc.09G006700 Theobroma cacao HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 51.5
HPP92_015372 Vanilla planifolia HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
HPP92_017405 Vanilla planifolia HOM05D000263 ORTHO05D000213 5.5e-06 55.1 68 52.9
Actinidia08949 Actinidia chinensis HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
CDE02G1071 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 52.9
Ca_21239_v3 Cicer arietinum L. HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
COL.COLO4_06835 Corchorus olitorius HOM05D000263 ORTHO05D000213 7.2e-06 54.7 77 48.1
COL.COLO4_19038 Corchorus olitorius HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
DCAR_017985 Daucus carota HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
Gohir.A06G106100 Gossypium hirsutum HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
Gohir.D06G108300 Gossypium hirsutum HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
Gorai.010G123000 Gossypium raimondii HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
Lalb_Chr07g0180561 Lupinus albus HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
Manes.03G003500 Manihot esculenta HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
Potri.006G275000 Populus trichocarpa HOM05D000263 ORTHO05D000213 7.2e-06 54.7 70 54.3
Thecc.06G038200 Theobroma cacao HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 51.5
TAR383G0349 Trochodendron aralioides HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 50.0
TAR626G0618 Trochodendron aralioides HOM05D000263 ORTHO05D000213 7.2e-06 54.7 68 50.0
Zm00001eb067750 Zea mays HOM05D000263 ORTHO05D000213 7.2e-06 54.7 70 51.4
arahy.Tifrunner.gnm1.ann1.L6XCTY Arachis hypogaea HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
arahy.Tifrunner.gnm1.ann1.T4QLFX Arachis hypogaea HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
MSTRG.9413 Avicennia marina HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
CAN.G81.5 Capsicum annuum HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 50.0
CiPaw.07G194100 Carya illinoinensis HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
CiPaw.08G019400 Carya illinoinensis HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Duzib187G0896 Durio zibethinus HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Duzib192G0966 Durio zibethinus HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Glyma.13G097900 Glycine max HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 52.9
Glyma.14G134100 Glycine max HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Glyma.17G061800 Glycine max HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 52.9
Glyma.17G199200 Glycine max HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Gohir.A13G178100 Gossypium hirsutum HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Gohir.D13G186200 Gossypium hirsutum HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Gorai.013G212200 Gossypium raimondii HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Lj6g0013156 Lotus japonicus HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 52.9
Lalb_Chr18g0052441 Lupinus albus HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Manes.16G136000 Manihot esculenta HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Medtr3g108800 Medicago truncatula HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Oeu025691.2 Olea europaea HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Phvul.001G058900 Phaseolus vulgaris HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Psat5g024360 Pisum sativum HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
Potri.018G090300 Populus trichocarpa HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 52.9
QL11p005157 Quercus lobata HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 52.9
Rhsim03G0265400 Rhododendron simsii HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 50.0
TPR.G12380 Trifolium pratense HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
VMungo0647G2498 Vigna mungo HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5
GSVIVG01001052001 Vitis vinifera HOM05D000263 ORTHO05D000213 9.4e-06 54.3 68 51.5


User provided reference genes

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