Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.2e-179 632.1 304 100.0
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.5e-82 309.7 164 90.2
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 5.2e-80 302.0 165 86.1
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 7.8e-76 288.1 164 80.5
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 1.3e-75 287.3 163 77.9
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 1.3e-75 287.3 163 77.9
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 2.3e-75 286.6 164 79.3
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.9e-75 285.8 163 79.1
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 3.9e-75 285.8 164 79.3
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 3.9e-75 285.8 164 79.3
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 5.1e-75 285.4 163 79.1
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 6.6e-75 285.0 164 79.3
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.1e-74 284.3 164 78.7
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.5e-74 283.9 161 79.5
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.5e-74 283.9 164 78.0
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.5e-74 283.9 164 78.0
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.5e-74 283.9 164 78.7
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.5e-74 283.9 164 77.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.5e-74 283.1 163 78.5
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.5e-74 283.1 162 78.4
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 3.3e-74 282.7 164 78.7
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 3.3e-74 282.7 161 80.7
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 9.6e-74 281.2 161 79.5
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 9.6e-74 281.2 161 78.3
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 9.6e-74 281.2 164 76.2
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.2e-73 280.8 164 78.0
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.2e-73 280.8 164 78.7
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.2e-73 280.8 161 78.9
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.2e-73 280.8 164 76.8
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.6e-73 280.4 164 78.0
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 2.1e-73 280.0 161 77.6
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 2.8e-73 279.6 161 78.9
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.8e-73 279.6 164 77.4
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 3.6e-73 279.3 164 75.6
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 4.7e-73 278.9 165 78.8
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.1e-72 277.7 163 77.9
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.4e-72 277.3 162 77.2
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.4e-72 277.3 162 75.9
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 1.8e-72 276.9 163 76.7
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.8e-72 276.9 161 78.9
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.4e-72 276.6 161 78.9
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.1e-72 276.2 140 94.3
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 3.1e-72 276.2 161 78.3
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 4.0e-72 275.8 163 76.7
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 4.0e-72 275.8 163 74.8
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 5.2e-72 275.4 163 74.2
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 6.8e-72 275.0 162 77.2
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 6.8e-72 275.0 162 79.0
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 8.9e-72 274.6 162 79.0
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 8.9e-72 274.6 161 76.4
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.2e-71 274.2 161 77.6
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.5e-71 273.9 162 77.2
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 1.5e-71 273.9 164 75.6
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.0e-71 273.5 162 75.9
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 2.6e-71 273.1 162 77.8
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 2.6e-71 273.1 161 76.4
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.4e-71 272.7 164 76.2
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 4.4e-71 272.3 161 74.5
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 4.4e-71 272.3 160 77.5
ECA248G3433 Erigeron canadensis HOM05D000017 ORTHO05D008278 5.8e-71 271.9 141 92.9
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 5.8e-71 271.9 160 78.1
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 5.8e-71 271.9 163 77.9
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 7.6e-71 271.6 163 75.5
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 9.9e-71 271.2 160 76.2
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 9.9e-71 271.2 163 77.3
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 1.7e-70 270.4 195 67.2
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.7e-70 270.4 170 72.9
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 2.2e-70 270.0 161 77.0
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 2.2e-70 270.0 162 76.5
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 2.9e-70 269.6 162 76.5
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 2.9e-70 269.6 164 73.2
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 4.9e-70 268.9 161 77.0
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 8.4e-70 268.1 162 75.9
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 8.4e-70 268.1 162 75.9
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 8.4e-70 268.1 162 75.9
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.1e-69 267.7 161 77.6
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 1.1e-69 267.7 161 77.6
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.4e-69 267.3 162 72.8
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.9e-69 266.9 161 76.4
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 2.4e-69 266.5 162 75.3
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 7.1e-69 265.0 161 77.0
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 9.3e-69 264.6 161 73.3
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.1e-68 263.5 163 75.5
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.1e-68 263.5 163 75.5
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 2.7e-68 263.1 160 73.1
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 8.7e-67 258.1 161 72.0
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 4.3e-66 255.8 156 75.0
ECA240G4702 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.8e-65 253.1 135 91.9
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 2.4e-64 250.0 161 67.7
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 3.1e-64 249.6 123 97.6
ECA248G0879 Erigeron canadensis HOM05D001163 ORTHO05D001769 1.2e-63 247.7 136 89.0
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 2.4e-61 240.0 165 70.3
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 5.4e-61 238.8 178 62.4
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.1e-60 236.9 160 68.8
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.9e-59 232.6 203 56.7
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.9e-58 230.3 138 75.4
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 7.3e-58 228.4 138 74.6
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-56 223.0 152 67.1
ECA238G3378 Erigeron canadensis HOM05D002416 ORTHO05D002554 9.0e-56 221.5 121 88.4
ECA248G2661 Erigeron canadensis HOM05D001521 ORTHO05D001342 1.7e-54 217.2 116 90.5
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.4e-53 214.2 199 58.8
ECA246G3956 Erigeron canadensis HOM05D000017 ORTHO05D008278 6.0e-52 208.8 135 82.2
ECA248G3973 Erigeron canadensis HOM05D000017 ORTHO05D008278 7.9e-52 208.4 109 91.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 2.3e-51 206.8 122 78.7
ECA240G2492 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-49 201.1 112 88.4
ECA247G3854 Erigeron canadensis HOM05D000017 ORTHO05D008278 6.2e-49 198.7 105 92.4
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 7.6e-47 191.8 112 76.8
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.1e-45 188.0 110 78.2
ECA246G4305 Erigeron canadensis HOM05D000042 ORTHO05D001427 3.9e-43 179.5 95 91.6
ECA248G0480 Erigeron canadensis HOM05D000017 ORTHO05D008278 5.1e-43 179.1 94 89.4
ECA248G0433 Erigeron canadensis HOM05D000041 ORTHO05D008278 8.2e-41 171.8 89 93.3
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 3.5e-36 156.4 91 79.1
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.6e-36 156.0 94 73.4
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 6.7e-35 152.1 91 79.1
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.4e-32 144.4 85 76.5
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 3.1e-32 143.3 150 54.0
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 3.8e-30 136.3 382 28.0
ECA248G2694 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.2e-29 132.1 65 95.4
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.2e-28 131.3 94 68.1
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 6.1e-28 129.0 73 78.1
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.4e-27 127.9 189 41.8
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 3.3e-26 123.2 66 80.3
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.7e-25 119.8 69 75.4
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.8e-24 117.5 67 79.1
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.1e-24 116.3 161 44.1
ECA238G1614 Erigeron canadensis HOM05D000017 ORTHO05D008278 1.1e-21 108.2 68 77.9
ECA233G6120 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.8e-17 93.6 47 91.5
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.7e-17 93.2 44 93.2
ECA233G4239 Erigeron canadensis HOM05D000017 ORTHO05D008278 2.4e-16 90.5 48 89.6
ECA232G1523 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.4e-08 64.7 174 27.0
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.4e-08 64.7 34 79.4
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 2.9e-06 57.0 129 27.1
HanXRQChr13g0412841 Helianthus annuus HOM05D003964 ORTHO05D000174 6.5e-06 55.8 116 28.4


User provided reference genes

Program Settings