Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 3.2e-139 498.4 253 100.0
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 4.0e-126 454.9 259 90.7
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 5.2e-65 251.9 273 56.4
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 5.7e-64 248.4 249 58.6
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 1.8e-57 226.9 250 54.0
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 2.9e-52 209.5 269 49.8
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 4.7e-50 202.2 239 51.0
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 5.2e-49 198.7 261 47.1
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 9.8e-48 194.5 267 48.7
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.7e-47 193.7 271 47.6
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 8.3e-47 191.4 264 45.8
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 3.1e-46 189.5 284 46.5
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.2e-45 187.6 254 47.2
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.0e-45 186.8 273 44.7
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 2.7e-45 186.4 270 48.1
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 2.3e-44 183.3 267 45.3
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 2.9e-44 183.0 257 46.3
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 1.9e-43 180.3 266 47.0
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 2.5e-43 179.9 271 46.1
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 7.3e-43 178.3 269 46.5
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 4.7e-42 175.6 268 45.9
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 8.0e-42 174.9 295 42.7
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 1.4e-41 174.1 249 47.4
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 2.3e-41 173.3 266 46.2
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 5.2e-41 172.2 263 44.5
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 6.8e-41 171.8 277 41.9
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.5e-40 170.6 258 45.0
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 3.4e-40 169.5 267 44.9
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 7.5e-40 168.3 268 44.4
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 7.5e-40 168.3 270 44.8
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 3.7e-39 166.0 266 45.9
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 1.8e-38 163.7 270 43.7
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 3.2e-38 162.9 269 45.0
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 3.2e-38 162.9 269 46.5
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 3.2e-38 162.9 258 45.3
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 3.2e-38 162.9 266 44.7
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 3.2e-38 162.9 268 44.8
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 5.4e-38 162.2 266 44.7
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.6e-37 160.6 269 44.6
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 1.6e-37 160.6 268 42.5
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 1.6e-37 160.6 268 44.4
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.0e-37 160.2 269 46.1
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 2.7e-37 159.8 267 44.6
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.5e-37 159.5 266 43.6
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 4.6e-37 159.1 263 45.6
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 4.6e-37 159.1 274 45.6
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 6.0e-37 158.7 287 41.5
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.0e-37 158.7 263 45.2
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.0e-37 158.7 263 46.4
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.0e-37 158.7 263 46.4
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 6.0e-37 158.7 267 45.7
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 6.0e-37 158.7 268 43.7
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 7.8e-37 158.3 267 43.8
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 7.8e-37 158.3 254 47.2
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 1.3e-36 157.5 272 43.4
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 1.3e-36 157.5 264 46.6
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-36 157.5 262 45.0
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-36 157.5 262 46.9
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-36 157.5 262 46.9
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.3e-36 156.8 261 42.5
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 3.9e-36 156.0 318 38.4
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.9e-36 156.0 265 44.5
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 5.0e-36 155.6 274 43.4
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 5.0e-36 155.6 267 44.6
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 8.6e-36 154.8 257 42.0
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 1.1e-35 154.5 262 44.3
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 1.1e-35 154.5 309 38.8
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 1.5e-35 154.1 272 43.0
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.5e-35 154.1 263 44.9
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 1.9e-35 153.7 260 42.3
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 2.5e-35 153.3 203 50.7
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 2.5e-35 153.3 261 44.1
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 9.5e-35 151.4 274 43.4
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 1.2e-34 151.0 267 41.9
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.6e-34 150.6 260 45.4
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.8e-34 149.8 267 43.8
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 3.6e-34 149.4 264 41.3
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 4.7e-34 149.1 265 44.9
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 6.2e-34 148.7 261 44.1
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 6.2e-34 148.7 267 41.6
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.1e-33 147.9 263 43.0
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.1e-33 147.9 263 43.0
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 1.1e-33 147.9 259 42.9
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 2.3e-33 146.7 170 54.1
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 4.0e-33 146.0 279 42.3
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 8.9e-33 144.8 270 42.6
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.2e-32 144.4 245 42.4
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 1.5e-32 144.1 274 42.0
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 1.5e-32 144.1 261 43.3
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 5.8e-32 142.1 265 40.4
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 5.8e-32 142.1 270 41.9
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 9.8e-32 141.4 276 43.5
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.3e-31 141.0 237 41.8
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 1.7e-31 140.6 276 43.5
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 1.7e-31 140.6 277 42.2
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 3.7e-31 139.4 254 43.7
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 6.4e-31 138.7 257 43.6
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 8.3e-31 138.3 270 42.2
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 1.1e-30 137.9 265 39.6
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 1.4e-30 137.5 279 40.9
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 3.2e-30 136.3 254 42.5
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 5.4e-30 135.6 279 40.5
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 5.4e-30 135.6 255 42.0
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 1.2e-29 134.4 255 43.9
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 1.6e-29 134.0 255 41.6
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 1.6e-29 134.0 255 41.2
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 3.5e-29 132.9 260 42.7
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 3.5e-29 132.9 264 40.2
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 4.6e-29 132.5 260 41.5
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 4.6e-29 132.5 266 41.0
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 6.0e-29 132.1 265 40.8
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 6.0e-29 132.1 260 40.8
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 7.8e-29 131.7 266 39.1
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 2.3e-28 130.2 266 39.5
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.0e-28 129.8 258 38.8
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 5.0e-28 129.0 275 38.5
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 6.6e-28 128.6 272 39.7
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 8.6e-28 128.3 256 42.6
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 8.6e-28 128.3 256 42.6
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 1.5e-27 127.5 191 49.7
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 1.9e-27 127.1 214 44.9
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 2.5e-27 126.7 274 37.6
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 2.5e-27 126.7 154 51.3
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 2.5e-27 126.7 259 40.2
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 2.5e-27 126.7 154 51.3
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 2.5e-27 126.7 154 51.3
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 3.3e-27 126.3 154 51.3
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 3.3e-27 126.3 178 50.6
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 4.3e-27 125.9 271 38.7
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 7.3e-27 125.2 263 40.3
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 2.8e-26 123.2 255 41.6
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 1.8e-25 120.6 267 39.7
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 2.3e-25 120.2 264 39.0
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 2.3e-25 120.2 202 46.0
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 3.1e-25 119.8 264 40.5
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 3.1e-25 119.8 256 38.7
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 1.2e-24 117.9 164 46.3
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 1.2e-24 117.9 174 45.4
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 2.0e-24 117.1 264 38.3
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 4.4e-24 115.9 255 41.6
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 5.8e-24 115.5 257 38.9
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 7.5e-24 115.2 281 37.4
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 1.7e-23 114.0 253 37.2
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 2.9e-23 113.2 266 37.6
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 4.9e-23 112.5 258 38.0
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 4.9e-23 112.5 186 44.6
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 4.9e-23 112.5 262 39.3
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 6.4e-23 112.1 166 46.4
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 8.3e-23 111.7 253 36.0
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 3.5e-21 106.3 263 36.5
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 3.5e-21 106.3 247 37.7
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 4.6e-21 105.9 261 37.5
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 1.3e-20 104.4 199 40.2
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 3.9e-20 102.8 212 39.2
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 3.3e-19 99.8 125 48.8
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 5.6e-19 99.0 255 34.9
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 8.1e-18 95.1 139 44.6
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 3.1e-17 93.2 264 33.3
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 5.2e-17 92.4 269 33.5
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 6.8e-17 92.0 256 33.2
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 8.9e-17 91.7 255 32.9
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 9.9e-16 88.2 235 33.6
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 2.9e-15 86.7 175 35.4
PGR031G3517 Punica granatum HOM05D003503 ORTHO05D003885 8.4e-15 85.1 357 30.0
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 9.2e-14 81.6 253 33.6
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 1.6e-13 80.9 70 64.3
unitig_26.g8909 Utricularia gibba HOM05D003503 ORTHO05D003885 3.5e-13 79.7 136 41.9
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 6.0e-13 79.0 174 34.5
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 3.0e-12 76.6 75 56.0
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 1.9e-11 73.9 174 35.1
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 5.6e-11 72.4 61 63.9
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 3.6e-10 69.7 80 52.5
ECA234G0160 Erigeron canadensis HOM05D003503 ORTHO05D003885 5.2e-09 65.9 57 68.4
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 4.4e-08 62.8 217 30.4
C04p28750 Brassica napus HOM05D003503 ORTHO05D003885 2.2e-07 60.5 95 36.8
Phvul.008G153400 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 2.2e-07 60.5 67 55.2
Phvul.011G101601 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.1e-06 58.2 68 52.9
QL04p070117 Quercus lobata HOM05D020871 ORTHO05D338115 1.9e-06 57.4 65 44.6
BolC7t41959H Brassica oleracea HOM05D003503 ORTHO05D003885 3.2e-06 56.6 132 33.3
MBI01_g36437_MAGBIO Magnolia biondii HOM05D003503 ORTHO05D003885 4.2e-06 56.2 278 28.1
Zm00001eb079910 Zea mays HOM05D003503 ORTHO05D003885 5.4e-06 55.8 165 33.3
C03p27180 Brassica napus HOM05D003503 ORTHO05D003885 9.3e-06 55.1 58 50.0
CSS0008617 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 9.3e-06 55.1 97 41.2
RcHm_v2.0_Chr7g0219161 Rosa chinensis HOM05D003503 ORTHO05D003885 9.3e-06 55.1 115 39.1


User provided reference genes

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