Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 2.5e-193 678.7 375 100.0
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 1.5e-49 201.1 516 36.8
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 7.7e-49 198.7 358 44.7
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 9.4e-39 165.2 313 45.4
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.4e-34 151.4 402 35.3
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.7e-33 147.1 383 35.5
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 1.0e-32 145.2 411 34.3
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 1.7e-32 144.4 379 36.9
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 3.8e-32 143.3 393 34.4
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 6.5e-32 142.5 352 36.4
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.9e-31 141.0 394 35.8
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 4.2e-31 139.8 148 54.7
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 9.4e-31 138.7 203 50.2
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 9.4e-31 138.7 399 36.3
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.1e-30 137.5 244 42.6
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 3.6e-30 136.7 402 35.1
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 6.1e-30 136.0 400 34.8
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 6.1e-30 136.0 361 37.7
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.0e-29 135.2 376 35.4
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.8e-29 134.4 412 31.3
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 4.0e-29 133.3 332 38.0
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.2e-29 132.9 355 35.2
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 5.2e-29 132.9 333 36.9
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 6.8e-29 132.5 370 34.9
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 8.8e-29 132.1 180 46.7
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 8.8e-29 132.1 400 35.2
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.2e-28 131.7 242 43.8
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.4e-28 130.2 412 30.8
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 5.7e-28 129.4 374 35.3
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 7.5e-28 129.0 278 37.8
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 9.8e-28 128.6 165 49.7
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 9.8e-28 128.6 334 32.6
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.7e-27 127.9 383 31.6
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.2e-27 127.5 322 34.2
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.2e-27 127.5 313 36.7
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 3.7e-27 126.7 418 30.9
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 8.3e-27 125.6 277 39.4
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 1.1e-26 125.2 426 33.8
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 1.4e-26 124.8 406 33.0
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.4e-26 124.8 146 50.0
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 2.4e-26 124.0 319 35.4
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 7.0e-26 122.5 384 32.3
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 7.0e-26 122.5 240 40.8
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 7.0e-26 122.5 401 33.4
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 1.2e-25 121.7 166 47.0
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 1.2e-25 121.7 444 33.8
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 2.7e-25 120.6 205 44.4
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 3.5e-25 120.2 389 36.2
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 4.5e-25 119.8 259 40.2
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.5e-25 119.8 164 52.4
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 7.7e-25 119.0 373 33.2
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.0e-24 118.6 188 47.9
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.0e-24 118.6 309 35.6
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 1.3e-24 118.2 231 43.3
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 1.3e-24 118.2 233 45.5
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 1.3e-24 118.2 313 38.0
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 2.3e-24 117.5 363 32.8
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 2.3e-24 117.5 363 32.8
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 3.8e-24 116.7 278 35.6
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 5.0e-24 116.3 380 33.9
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 8.6e-24 115.5 339 32.4
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 1.1e-23 115.2 318 37.1
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.5e-23 114.8 224 45.5
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.5e-23 114.8 321 34.9
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.9e-23 114.4 355 33.2
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.9e-23 114.4 224 45.5
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.3e-23 113.6 300 36.7
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 4.2e-23 113.2 375 33.3
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 5.6e-23 112.8 375 33.6
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 7.2e-23 112.5 400 31.0
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 9.5e-23 112.1 224 45.5
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 9.5e-23 112.1 224 45.5
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.2e-22 111.7 452 31.4
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 1.6e-22 111.3 300 36.0
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 4.7e-22 109.8 136 52.9
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 8.0e-22 109.0 313 31.9
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.0e-21 108.6 209 42.1
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.8e-21 107.8 391 31.7
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 2.3e-21 107.5 202 38.1
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.3e-21 107.5 133 55.6
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 4.0e-21 106.7 410 31.5
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 5.2e-21 106.3 396 31.3
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.0e-20 104.4 136 50.7
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 2.0e-20 104.4 383 31.9
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 1.7e-19 101.3 249 41.0
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.2e-19 100.9 396 31.3
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 2.9e-19 100.5 176 42.6
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 2.9e-19 100.5 143 50.3
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 2.9e-19 100.5 189 41.3
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 3.7e-19 100.1 391 31.2
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 4.9e-19 99.8 145 43.4
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 6.4e-19 99.4 350 29.7
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 8.3e-19 99.0 145 46.9
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 8.3e-19 99.0 390 31.3
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 2.4e-18 97.4 135 51.9
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 2.4e-18 97.4 408 31.6
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 3.2e-18 97.1 160 43.8
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 3.2e-18 97.1 287 34.8
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 4.1e-18 96.7 258 34.9
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 4.1e-18 96.7 388 30.9
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 4.1e-18 96.7 388 30.9
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 5.4e-18 96.3 122 48.4
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 9.2e-18 95.5 383 31.6
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 9.2e-18 95.5 312 34.9
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 1.2e-17 95.1 221 41.6
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.6e-17 94.7 136 44.1
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 3.5e-17 93.6 149 44.3
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 7.8e-17 92.4 408 30.9
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 2.3e-16 90.9 272 36.8
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 4.3e-15 86.7 323 32.2
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 4.3e-15 86.7 323 32.2
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.6e-15 86.3 207 37.2
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 2.1e-14 84.3 135 45.2
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.6e-14 83.6 139 43.2
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 4.7e-14 83.2 375 31.2
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 4.0e-13 80.1 139 40.3
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 6.8e-13 79.3 173 36.4
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 8.9e-13 79.0 394 32.0
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 4.4e-12 76.6 206 33.5
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 9.8e-12 75.5 139 38.8
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 4.9e-11 73.2 47 74.5
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 4.1e-10 70.1 138 35.5
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 7.0e-10 69.3 325 28.0
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.6e-09 68.2 183 33.9
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 1.1e-07 62.0 133 39.1
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 1.5e-07 61.6 179 31.3
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 1.9e-07 61.2 138 42.8
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 1.9e-07 61.2 229 34.5
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 1.6e-06 58.2 143 44.1
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 2.1e-06 57.8 217 30.9
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 2.1e-06 57.8 150 39.3
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.7e-06 56.6 104 47.1


User provided reference genes

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