Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2232 Erigeron canadensis HOM05D004770 ORTHO05D005572 9.8e-124 446.8 227 100.0
HanXRQChr08g0213371 Helianthus annuus HOM05D004770 ORTHO05D005572 2.6e-116 422.2 227 93.8
Lsat_1_v5_gn_5_186200 Lactuca sativa HOM05D004770 ORTHO05D005572 5.6e-111 404.4 224 91.5
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla HOM05D004770 ORTHO05D005572 6.4e-107 391.0 227 86.3
Ciclev10022091m.g Citrus clementina HOM05D004770 ORTHO05D005572 1.4e-106 389.8 227 84.1
Potri.002G049900 Populus trichocarpa HOM05D004770 ORTHO05D005572 4.1e-106 388.3 227 85.0
Thecc.01G273700 Theobroma cacao HOM05D004770 ORTHO05D005572 5.4e-106 387.9 227 85.0
CSS0005681 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 7.1e-106 387.5 227 85.5
Dinv34783 Davidia involucrata HOM05D004770 ORTHO05D005572 9.2e-106 387.1 227 84.6
Manes.01G205200 Manihot esculenta HOM05D004770 ORTHO05D005572 1.2e-105 386.7 227 84.1
Potri.005G212800 Populus trichocarpa HOM05D004770 ORTHO05D005572 1.2e-105 386.7 220 85.9
CiPaw.07G089000 Carya illinoinensis HOM05D004770 ORTHO05D005572 2.1e-105 386.0 227 84.1
Cc01_g06090 Coffea canephora HOM05D004770 ORTHO05D005572 2.7e-105 385.6 227 84.1
TWI39G0629 Tripterygium wilfordii HOM05D004770 ORTHO05D005572 6.0e-105 384.4 227 84.1
Atru.chr5.1488 Acer truncatum HOM05D004770 ORTHO05D005572 1.0e-104 383.6 227 83.7
Nitab4.5_0000759g0280 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.3e-104 383.3 227 85.0
CSS0032403 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.7e-104 382.9 227 84.6
Eucgr.G02085 Eucalyptus grandis HOM05D004770 ORTHO05D005572 1.7e-104 382.9 227 84.1
PGR031G3940 Punica granatum HOM05D004770 ORTHO05D005572 1.7e-104 382.9 227 83.7
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 3.9e-104 381.7 220 85.5
Nn1g02388 Nelumbo nucifera HOM05D004770 ORTHO05D005572 5.1e-104 381.3 220 86.8
Nn6g34126 Nelumbo nucifera HOM05D004770 ORTHO05D005572 8.6e-104 380.6 227 84.1
Cfa006174 Carpinus fangiana HOM05D004770 ORTHO05D005572 1.1e-103 380.2 227 82.8
TAR362G0723 Trochodendron aralioides HOM05D004770 ORTHO05D005572 3.3e-103 378.6 227 82.4
vmacro02598 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 3.3e-103 378.6 228 84.2
Lalb_Chr18g0051481 Lupinus albus HOM05D004770 ORTHO05D005572 4.3e-103 378.3 227 83.3
Duzib138G1187 Durio zibethinus HOM05D004770 ORTHO05D005572 5.6e-103 377.9 227 83.3
QL01p010878 Quercus lobata HOM05D004770 ORTHO05D005572 9.6e-103 377.1 226 82.3
Lj1A49T61 Lonicera japonica HOM05D004770 ORTHO05D005572 1.2e-102 376.7 227 81.5
GSVIVG01001190001 Vitis vinifera HOM05D004770 ORTHO05D005572 2.8e-102 375.6 227 81.9
RcHm_v2.0_Chr6g0290401 Rosa chinensis HOM05D004770 ORTHO05D005572 3.6e-102 375.2 229 83.0
Actinidia24914 Actinidia chinensis HOM05D004770 ORTHO05D005572 4.7e-102 374.8 223 82.5
Oeu025750.1 Olea europaea HOM05D004770 ORTHO05D005572 6.2e-102 374.4 217 85.7
CANSAT80G2828 Cannabis sativa HOM05D004770 ORTHO05D005572 8.1e-102 374.0 222 83.3
Lj3A581T22 Lonicera japonica HOM05D004770 ORTHO05D005572 8.1e-102 374.0 227 81.5
FAN20G2343 Fragaria x ananassa HOM05D004770 ORTHO05D005572 1.1e-101 373.6 229 83.0
CAN.G1549.14 Capsicum annuum HOM05D004770 ORTHO05D005572 1.8e-101 372.9 228 84.2
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 1.8e-101 372.9 226 82.7
SalBow4G2779 Salvia bowleyana HOM05D004770 ORTHO05D005572 2.4e-101 372.5 226 81.9
Glyma.18G056100 Glycine max HOM05D004770 ORTHO05D005572 6.8e-101 370.9 227 82.8
SalBow7G1168 Salvia bowleyana HOM05D004770 ORTHO05D005572 8.9e-101 370.5 227 79.3
Sopen06g035540 Solanum pennellii HOM05D004770 ORTHO05D005572 8.9e-101 370.5 228 82.9
PGSC0003DMG400020135 Solanum tuberosum HOM05D004770 ORTHO05D005572 8.9e-101 370.5 228 82.9
Migut.N02033 Erythranthe guttata HOM05D004770 ORTHO05D005572 1.2e-100 370.2 227 79.7
MBI02_g08255_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 1.2e-100 370.2 215 84.7
Solyc06g084160.4 Solanum lycopersicum HOM05D004770 ORTHO05D005572 1.5e-100 369.8 228 82.9
Gorai.008G003100 Gossypium raimondii HOM05D004770 ORTHO05D005572 2.6e-100 369.0 227 81.5
SGA_v2.0_scaffold1G00513 Striga asiatica HOM05D004770 ORTHO05D005572 2.6e-100 369.0 227 78.9
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea HOM05D004770 ORTHO05D005572 4.4e-100 368.2 226 81.0
Gohir.A12G003600 Gossypium hirsutum HOM05D004770 ORTHO05D005572 4.4e-100 368.2 227 81.9
Nitab4.5_0000208g0100 Nicotiana tabacum HOM05D004770 ORTHO05D005572 7.6e-100 367.5 227 79.3
PSO832G1010 Papaver somniferum HOM05D004770 ORTHO05D005572 7.6e-100 367.5 227 80.6
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea HOM05D004770 ORTHO05D005572 9.9e-100 367.1 226 81.0
BcaNung02803 Brassica carinata HOM05D004770 ORTHO05D005572 9.9e-100 367.1 227 81.1
Gohir.D12G003300 Gossypium hirsutum HOM05D004770 ORTHO05D005572 9.9e-100 367.1 227 81.1
Phvul.006G075100 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 9.9e-100 367.1 227 81.1
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea HOM05D004770 ORTHO05D005572 1.3e-99 366.7 226 80.5
DCAR_012498 Daucus carota HOM05D004770 ORTHO05D005572 2.9e-99 365.5 220 82.3
Thhalv10004885m.g Eutrema salsugineum HOM05D004770 ORTHO05D005572 3.8e-99 365.2 217 82.5
A06p36610 Brassica napus HOM05D004770 ORTHO05D005572 6.4e-99 364.4 227 80.6
BraA06t26586Z Brassica rapa HOM05D004770 ORTHO05D005572 6.4e-99 364.4 227 80.6
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea HOM05D004770 ORTHO05D005572 8.4e-99 364.0 226 80.1
BcaNung03978 Brassica carinata HOM05D004770 ORTHO05D005572 8.4e-99 364.0 227 80.6
Carub.0006s2388 Capsella rubella HOM05D004770 ORTHO05D005572 8.4e-99 364.0 227 80.6
MD11G1280900 Malus domestica HOM05D004770 ORTHO05D005572 8.4e-99 364.0 229 80.8
Aa31LG10G17080 Aethionema arabicum HOM05D004770 ORTHO05D005572 1.1e-98 363.6 227 79.7
Aqoxy2G03435 Aquilegia oxysepala HOM05D004770 ORTHO05D005572 1.1e-98 363.6 227 79.3
AT5G26110 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 1.1e-98 363.6 227 81.1
CARHR187390 Cardamine hirsuta HOM05D004770 ORTHO05D005572 1.4e-98 363.2 227 79.3
COL.COLO4_09057 Corchorus olitorius HOM05D001769 ORTHO05D001695 1.9e-98 362.8 207 87.0
Medtr3g465790 Medicago truncatula HOM05D004770 ORTHO05D005572 1.9e-98 362.8 227 79.3
Rhsim13G0027500 Rhododendron simsii HOM05D004770 ORTHO05D005572 1.9e-98 362.8 214 84.1
AL2G11930 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 2.4e-98 362.5 227 79.7
Sp2g21620 Schrenkiella parvula HOM05D004770 ORTHO05D005572 2.4e-98 362.5 217 82.9
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.2e-98 362.1 218 83.5
Solyc08g005140.3 Solanum lycopersicum HOM05D004770 ORTHO05D005572 3.2e-98 362.1 227 80.6
FAN27G1754 Fragaria x ananassa HOM05D004770 ORTHO05D005572 5.4e-98 361.3 233 79.4
Nitab4.5_0004355g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 5.4e-98 361.3 214 84.1
Phvul.007G249400 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 5.4e-98 361.3 227 79.3
AUR62032312 Chenopodium quinoa HOM05D004770 ORTHO05D005572 1.2e-97 360.1 227 78.0
Ca_15021_v3 Cicer arietinum L. HOM05D004770 ORTHO05D005572 1.2e-97 360.1 227 78.9
Sopen08g001150 Solanum pennellii HOM05D004770 ORTHO05D005572 1.2e-97 360.1 227 80.6
Carub.0005s0602 Capsella rubella HOM05D004770 ORTHO05D005572 1.6e-97 359.8 228 79.8
VMungo0540G0250 Vigna mungo HOM05D004770 ORTHO05D005572 2.1e-97 359.4 227 79.7
ClCG03G016560 Citrullus lanatus HOM05D004770 ORTHO05D005572 7.8e-97 357.5 227 78.4
MELO3C015367.2 Cucumis melo HOM05D004770 ORTHO05D005572 1.0e-96 357.1 227 78.4
THA.LOC104817561 Tarenaya hassleriana HOM05D004770 ORTHO05D005572 1.0e-96 357.1 217 79.7
HPP92_017651 Vanilla planifolia HOM05D004770 ORTHO05D005572 1.7e-96 356.3 215 81.4
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 2.3e-96 355.9 214 79.4
EL10Ac5g10525 Beta vulgaris HOM05D004770 ORTHO05D005572 3.9e-96 355.1 227 76.7
CsaV3_1G039420 Cucumis sativus L. HOM05D004770 ORTHO05D005572 1.5e-95 353.2 227 78.0
Migut.D00330 Erythranthe guttata HOM05D004770 ORTHO05D005572 3.3e-95 352.1 220 79.5
PSO170G2661 Papaver somniferum HOM05D004770 ORTHO05D005572 3.3e-95 352.1 227 76.2
Sed0021970 Sechium edule HOM05D004770 ORTHO05D005572 3.3e-95 352.1 222 79.3
Cpa.g.sc41.63 Carica papaya HOM05D004770 ORTHO05D005572 9.6e-95 350.5 210 83.3
PGSC0003DMG400017838 Solanum tuberosum HOM05D004770 ORTHO05D005572 1.3e-94 350.1 214 82.2
Zm00001eb222890 Zea mays HOM05D004770 ORTHO05D005572 1.6e-94 349.7 227 76.7
DCAR_002713 Daucus carota HOM05D004770 ORTHO05D005572 3.6e-94 348.6 204 83.8
AUR62012543 Chenopodium quinoa HOM05D004770 ORTHO05D005572 4.8e-94 348.2 206 82.5
Haze_04673 Corylus avellana HOM05D004770 ORTHO05D005572 8.1e-94 347.4 225 77.3
ATR0665G226 Amborella trichopoda HOM05D004770 ORTHO05D005572 1.8e-93 346.3 215 79.5
Lj3g0010058 Lotus japonicus HOM05D004770 ORTHO05D005572 3.1e-93 345.5 216 80.6
MBI15_g39353_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 5.3e-93 344.7 205 82.9
C07p41870 Brassica napus HOM05D004770 ORTHO05D005572 9.0e-93 344.0 214 80.4
vmacro14906 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 9.0e-93 344.0 214 80.8
Psat2g184920 Pisum sativum HOM05D004770 ORTHO05D005572 3.4e-92 342.0 265 67.5
Hund02843 Selenicereus undatus HOM05D004770 ORTHO05D005572 4.9e-91 338.2 214 76.2
VMungo0720G0347 Vigna mungo HOM05D004770 ORTHO05D005572 1.4e-90 336.7 214 76.6
TPR.G25688 Trifolium pratense HOM05D004770 ORTHO05D005572 7.1e-90 334.3 212 77.4
PSO210G1988 Papaver somniferum HOM05D004770 ORTHO05D005572 2.7e-89 332.4 227 73.6
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 2.7e-89 332.4 202 83.7
BolC7t44719H Brassica oleracea HOM05D004770 ORTHO05D005572 4.6e-89 331.6 237 72.6
Peaxi162Scf00783g00122 Petunia axillaris HOM05D004770 ORTHO05D005572 3.1e-85 318.9 191 81.7
SEGI_22603 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 1.5e-84 316.6 214 73.4
CAN.G1549.26 Capsicum annuum HOM05D004770 ORTHO05D005572 9.9e-84 313.9 227 74.0
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 9.9e-84 313.9 190 79.5
Lj2g0018175 Lotus japonicus HOM05D004770 ORTHO05D005572 2.2e-83 312.8 195 77.9
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 5.4e-82 308.1 212 71.7
Nitab4.5_0006132g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 5.6e-79 298.1 195 73.3
Glyma.17G044400 Glycine max HOM05D004770 ORTHO05D005572 3.7e-78 295.4 183 82.5
Mapoly0133s0052 Marchantia polymorpha HOM05D004770 ORTHO05D005572 1.7e-75 286.6 214 67.3
CSS0010466 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.0e-72 277.3 229 65.9
Pp3c15_20330 Physcomitrium patens HOM05D004770 ORTHO05D005572 2.3e-72 276.2 231 63.2
Lj6g0011383 Lotus japonicus HOM05D004770 ORTHO05D005572 5.1e-72 275.0 164 83.5
Lsat_1_v5_gn_3_83521 Lactuca sativa HOM05D004770 ORTHO05D005572 1.5e-71 273.5 164 86.0
SMO358G0317 Selaginella moellendorffii HOM05D004770 ORTHO05D005572 1.6e-70 270.0 226 62.8
QL01p011010 Quercus lobata HOM05D004770 ORTHO05D005572 3.7e-70 268.9 193 72.5
Manes.05G078700 Manihot esculenta HOM05D004770 ORTHO05D005572 4.8e-70 268.5 227 63.9
Sp5g00290 Schrenkiella parvula HOM05D004770 ORTHO05D005572 6.2e-70 268.1 164 78.7
FvH4_2g23150 Fragaria vesca HOM05D004770 ORTHO05D005572 1.7e-67 260.0 197 70.6
AL2G11990 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 2.7e-65 252.7 160 76.9
AagrBONN_evm.TU.Sc2ySwM_362.2288 Anthoceros agrestis HOM05D004770 ORTHO05D005572 4.6e-65 251.9 209 61.2
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 4.8e-62 241.9 163 72.4
Sc05g0001180 Simmondsia chinensis HOM05D004770 ORTHO05D005572 2.6e-60 236.1 153 72.5
CBR_g40454 Chara braunii HOM05D004770 ORTHO05D005572 2.9e-59 232.6 237 51.1
MCO10G359 Micromonas commoda HOM05D004770 ORTHO05D005572 8.2e-54 214.5 215 52.6
SHI22269 Sapria himalayana HOM05D004770 ORTHO05D005572 7.7e-52 208.0 131 76.3
Psat6g025640 Pisum sativum HOM05D004770 ORTHO05D005572 4.7e-49 198.7 201 56.7
RcHm_v2.0_Chr3g0476231 Rosa chinensis HOM05D004770 ORTHO05D005572 5.5e-42 175.3 108 80.6
Zm00001eb031460 Zea mays HOM05D004770 ORTHO05D005572 8.8e-40 167.9 100 79.0
Actinidia09114 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.3e-39 166.0 115 73.0
Zm00001eb432290 Zea mays HOM05D004770 ORTHO05D005572 1.4e-29 134.0 92 67.4
Actinidia21134 Actinidia chinensis HOM05D004770 ORTHO05D005572 2.0e-28 130.2 87 73.6
Actinidia21133 Actinidia chinensis HOM05D004770 ORTHO05D005572 5.9e-28 128.6 109 64.2
Glyma.02G191000 Glycine max HOM05D004770 ORTHO05D005572 1.7e-27 127.1 135 52.6
TAR633G1205 Trochodendron aralioides HOM05D004770 ORTHO05D005572 3.0e-24 116.3 113 59.3
CDE04G0604 Ceratophyllum demersum HOM05D004770 ORTHO05D005572 7.7e-20 101.7 63 73.0
TAR633G0687 Trochodendron aralioides HOM05D004770 ORTHO05D005572 8.0e-17 91.7 51 88.2
TAR636G2941 Trochodendron aralioides HOM05D004770 ORTHO05D005572 5.2e-16 89.0 97 49.5
AT1G08120 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 3.4e-15 86.3 70 68.6
GSVIVG01020385001 Vitis vinifera HOM05D004770 ORTHO05D005572 1.1e-13 81.3 114 45.6
BcaC03g17841 Brassica carinata HOM05D004770 ORTHO05D005572 9.2e-13 78.2 68 55.9
Cre06.g306800 Chlamydomonas reinhardtii HOM05D004770 ORTHO05D005572 1.7e-11 73.9 208 27.9
GSVIVG01017585001 Vitis vinifera HOM05D004770 ORTHO05D005572 1.2e-07 61.2 63 55.6


User provided reference genes

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