Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2047 Erigeron canadensis HOM05D000842 ORTHO05D000650 1.1e-68 264.2 279 100.0
Dinv28686 Davidia involucrata HOM05D000842 ORTHO05D000650 1.4e-15 87.8 180 33.3
Lj1A127G60 Lonicera japonica HOM05D000842 ORTHO05D000650 3.2e-15 86.7 182 34.1
Hma1.2p1_2630F.1_g325720 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 5.4e-15 85.9 185 32.4
CsaV3_1G036640 Cucumis sativus L. HOM05D000842 ORTHO05D000650 7.1e-15 85.5 179 40.2
ClCG03G000280 Citrullus lanatus HOM05D000842 ORTHO05D000650 1.2e-14 84.7 183 41.0
Lsat_1_v5_gn_5_174501 Lactuca sativa HOM05D000842 ORTHO05D000650 1.2e-14 84.7 182 36.3
Sed0019393 Sechium edule HOM05D000842 ORTHO05D000650 1.6e-14 84.3 183 53.6
MBI03_g33624_MAGBIO Magnolia biondii HOM05D000842 ORTHO05D000650 2.7e-14 83.6 183 31.1
Eucgr.B02221 Eucalyptus grandis HOM05D000842 ORTHO05D000650 2.3e-13 80.5 185 32.4
Lsat_1_v5_gn_9_18420 Lactuca sativa HOM05D000842 ORTHO05D000650 5.1e-13 79.3 182 34.6
Psat6g139640 Pisum sativum HOM05D000842 ORTHO05D000650 6.6e-13 79.0 188 30.3
Aqoxy1G01306 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 8.6e-13 78.6 189 30.2
Medtr5g072760 Medicago truncatula HOM05D000842 ORTHO05D000650 1.5e-12 77.8 188 29.3
SHI19196 Sapria himalayana HOM05D000842 ORTHO05D000650 1.5e-12 77.8 185 30.3
vmacro14616 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 1.5e-12 77.8 189 41.3
Manes.02G216400 Manihot esculenta HOM05D000842 ORTHO05D000650 2.5e-12 77.0 183 30.6
TWI31G0085 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 3.3e-12 76.6 182 39.6
MELO3C020505.2 Cucumis melo HOM05D000842 ORTHO05D000650 5.6e-12 75.9 207 30.0
FAN25G2914 Fragaria x ananassa HOM05D000842 ORTHO05D000650 9.5e-12 75.1 189 31.2
GSVIVG01024666001 Vitis vinifera HOM05D000842 ORTHO05D000650 9.5e-12 75.1 178 38.2
Actinidia34476 Actinidia chinensis HOM05D000842 ORTHO05D000650 1.2e-11 74.7 178 31.5
CAN.G1477.1 Capsicum annuum HOM05D000842 ORTHO05D000650 1.2e-11 74.7 187 28.9
Ciclev10028985m.g Citrus clementina HOM05D000842 ORTHO05D000650 1.2e-11 74.7 184 39.1
Duzib168G0310 Durio zibethinus HOM05D000842 ORTHO05D000650 1.2e-11 74.7 189 29.1
FAN21G1765 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.2e-11 74.7 189 30.7
SGA_v2.0_scaffold413G51175 Striga asiatica HOM05D004214 ORTHO05D004963 1.2e-11 74.7 185 33.5
HPP92_026124 Vanilla planifolia HOM05D000842 ORTHO05D000650 1.2e-11 74.7 189 28.0
FAN16G0745 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.6e-11 74.3 189 30.7
QL01p040006 Quercus lobata HOM05D000842 ORTHO05D000650 1.6e-11 74.3 189 29.6
CSS0048360 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 2.1e-11 73.9 177 29.9
Nn2g10984 Nelumbo nucifera HOM05D000842 ORTHO05D000650 2.8e-11 73.6 189 28.6
FvH4_3g39520 Fragaria vesca HOM05D000842 ORTHO05D000650 3.6e-11 73.2 189 30.7
FAN11G2963 Fragaria x ananassa HOM05D000842 ORTHO05D000650 3.6e-11 73.2 189 30.7
PGR102G2939 Punica granatum HOM05D000842 ORTHO05D000650 6.2e-11 72.4 188 29.3
CSS0029835 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 8.1e-11 72.0 179 38.0
Glyma.14G197800 Glycine max HOM05D000842 ORTHO05D000650 8.1e-11 72.0 188 39.9
VMungo0647G1673 Vigna mungo HOM05D000842 ORTHO05D000650 8.1e-11 72.0 188 39.9
CANSAT54G1405 Cannabis sativa HOM05D000842 ORTHO05D000650 1.1e-10 71.6 189 29.1
Migut.D00852 Erythranthe guttata HOM05D000842 ORTHO05D000650 1.1e-10 71.6 177 28.2
MSTRG.21235 Avicennia marina HOM05D000842 ORTHO05D000650 1.4e-10 71.2 177 37.3
Gohir.D05G108600 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.8e-10 70.9 184 31.0
Gorai.009G112800 Gossypium raimondii HOM05D000842 ORTHO05D000650 1.8e-10 70.9 184 31.0
Potri.001G281400 Populus trichocarpa HOM05D000842 ORTHO05D000650 1.8e-10 70.9 189 29.6
Gohir.A05G108400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 2.4e-10 70.5 184 34.8
Nn6g34387 Nelumbo nucifera HOM05D000842 ORTHO05D000650 2.4e-10 70.5 179 54.2
Ca_05641_v3 Cicer arietinum L. HOM05D000842 ORTHO05D000650 3.1e-10 70.1 188 34.0
Dinv09662 Davidia involucrata HOM05D000842 ORTHO05D000650 3.1e-10 70.1 185 41.6
Prupe.6G050600 Prunus persica HOM05D000842 ORTHO05D000650 4.0e-10 69.7 178 29.2
TAR629G1485 Trochodendron aralioides HOM05D000842 ORTHO05D000650 4.0e-10 69.7 179 33.0
Sc03g0010740 Simmondsia chinensis HOM05D000842 ORTHO05D000650 5.2e-10 69.3 185 28.1
Sc21g0005200 Simmondsia chinensis HOM05D000842 ORTHO05D000650 6.8e-10 68.9 189 31.7
TAR633G2814 Trochodendron aralioides HOM05D000842 ORTHO05D000650 8.9e-10 68.6 177 27.7
Dinv13354 Davidia involucrata HOM05D000842 ORTHO05D000650 1.2e-09 68.2 178 51.1
Eucgr.F03229 Eucalyptus grandis HOM05D000842 ORTHO05D000650 1.2e-09 68.2 178 47.8
Glyma.02G230700 Glycine max HOM05D000842 ORTHO05D000650 1.2e-09 68.2 189 27.5
TAR627G1038 Trochodendron aralioides HOM05D000842 ORTHO05D000650 1.2e-09 68.2 179 32.4
Cfa011759 Carpinus fangiana HOM05D000842 ORTHO05D000650 1.5e-09 67.8 175 28.0
Potri.009G076700 Populus trichocarpa HOM05D000842 ORTHO05D000650 1.5e-09 67.8 182 47.3
Sopen09g018970 Solanum pennellii HOM05D000842 ORTHO05D000650 1.5e-09 67.8 187 28.9
ATR0680G176 Amborella trichopoda HOM05D000842 ORTHO05D000650 2.0e-09 67.4 175 26.9
arahy.Tifrunner.gnm1.ann1.BXGR3K Arachis hypogaea HOM05D000842 ORTHO05D000650 2.0e-09 67.4 188 27.1
Nitab4.5_0000046g0050 Nicotiana tabacum HOM05D000842 ORTHO05D000650 2.0e-09 67.4 176 35.8
HPP92_012416 Vanilla planifolia HOM05D000842 ORTHO05D000650 2.0e-09 67.4 177 43.5
AL59U10010 Arabidopsis lyrata HOM05D000842 ORTHO05D000650 2.6e-09 67.0 190 29.5
arahy.Tifrunner.gnm1.ann1.Y57QNR Arachis hypogaea HOM05D000842 ORTHO05D000650 2.6e-09 67.0 188 26.6
Thecc.09G355800 Theobroma cacao HOM05D000842 ORTHO05D000650 2.6e-09 67.0 182 32.4
Ca_02945_v3 Cicer arietinum L. HOM05D000842 ORTHO05D000650 3.4e-09 66.6 178 42.7
Haze_24396 Corylus avellana HOM05D000842 ORTHO05D000650 3.4e-09 66.6 189 26.5
MD03G1060200 Malus domestica HOM05D000842 ORTHO05D000650 3.4e-09 66.6 174 28.2
CiPaw.11G155400 Carya illinoinensis HOM05D000842 ORTHO05D000650 4.4e-09 66.2 179 49.2
Dinv26701 Davidia involucrata HOM05D000842 ORTHO05D000650 4.4e-09 66.2 175 54.9
FAN25G0524 Fragaria x ananassa HOM05D000842 ORTHO05D000650 4.4e-09 66.2 182 42.9
LjContig00141g0019488 Lotus japonicus HOM05D000842 ORTHO05D000650 4.4e-09 66.2 188 27.7
Peaxi162Scf00239g00098 Petunia axillaris HOM05D000842 ORTHO05D000650 4.4e-09 66.2 178 29.8
Solyc09g055700.4 Solanum lycopersicum HOM05D000842 ORTHO05D000650 4.4e-09 66.2 176 29.0
Nn3g20957 Nelumbo nucifera HOM05D000842 ORTHO05D000650 5.8e-09 65.9 173 32.9
QL08p024827 Quercus lobata HOM05D000842 ORTHO05D000650 5.8e-09 65.9 178 36.0
Cpa.g.sc2.375 Carica papaya HOM05D000842 ORTHO05D000650 7.6e-09 65.5 180 42.2
CDE01G0231 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 7.6e-09 65.5 183 46.4
Sabra09G0058500 Salix brachista HOM05D000842 ORTHO05D000650 7.6e-09 65.5 180 45.6
A05p15310 Brassica napus HOM05D000842 ORTHO05D000650 9.9e-09 65.1 189 29.6
BraA05t20449Z Brassica rapa HOM05D000842 ORTHO05D000650 9.9e-09 65.1 189 29.6
Manes.03G078500 Manihot esculenta HOM05D000842 ORTHO05D000650 9.9e-09 65.1 178 41.0
Atru.chr3.4132 Acer truncatum HOM05D000842 ORTHO05D000650 1.3e-08 64.7 174 27.6
BcaC02g11095 Brassica carinata HOM05D000842 ORTHO05D000650 1.3e-08 64.7 189 29.6
C04p20530 Brassica napus HOM05D000842 ORTHO05D000650 1.3e-08 64.7 189 29.6
BolC4t23578H Brassica oleracea HOM05D000842 ORTHO05D000650 1.3e-08 64.7 189 29.6
Cc05_g10630 Coffea canephora HOM05D000842 ORTHO05D000650 1.3e-08 64.7 179 48.6
Haze_08444 Corylus avellana HOM05D000842 ORTHO05D000650 1.3e-08 64.7 178 38.2
ECA236G2583 Erigeron canadensis HOM05D000842 ORTHO05D000650 1.3e-08 64.7 184 50.0
Phvul.008G257500 Phaseolus vulgaris HOM05D000842 ORTHO05D000650 1.3e-08 64.7 188 38.3
Ah.04g161920 Amaranthus hybridus HOM05D000842 ORTHO05D000650 1.7e-08 64.3 179 41.9
RcHm_v2.0_Chr5g0071291 Rosa chinensis HOM05D000842 ORTHO05D000650 1.7e-08 64.3 189 28.6
EL10Ac4g08436 Beta vulgaris HOM05D000842 ORTHO05D000650 2.2e-08 63.9 179 27.4
BcaB02g10299 Brassica carinata HOM05D000842 ORTHO05D000650 2.9e-08 63.5 189 29.1
Cfa019507 Carpinus fangiana HOM05D000842 ORTHO05D000650 2.9e-08 63.5 178 35.4
Thhalv10017024m.g Eutrema salsugineum HOM05D000842 ORTHO05D000650 2.9e-08 63.5 185 27.6
MD03G1250800 Malus domestica HOM05D000842 ORTHO05D000650 2.9e-08 63.5 178 46.1
MD11G1271000 Malus domestica HOM05D000842 ORTHO05D000650 2.9e-08 63.5 178 42.1
Actinidia12607 Actinidia chinensis HOM05D000842 ORTHO05D000650 3.8e-08 63.2 179 39.7
FvH4_3g17610 Fragaria vesca HOM05D000842 ORTHO05D000650 3.8e-08 63.2 182 40.7
FAN16G3507 Fragaria x ananassa HOM05D000842 ORTHO05D000650 3.8e-08 63.2 182 40.7
CDE12G0673 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 4.9e-08 62.8 180 35.6
COL.COLO4_11128 Corchorus olitorius HOM05D000842 ORTHO05D000650 4.9e-08 62.8 185 37.8
FAN11G0959 Fragaria x ananassa HOM05D000842 ORTHO05D000650 4.9e-08 62.8 182 41.8
PSO541G2069 Papaver somniferum HOM05D000842 ORTHO05D000650 4.9e-08 62.8 179 43.0
ClCG11G017130 Citrullus lanatus HOM05D000842 ORTHO05D000650 6.4e-08 62.4 178 46.1
MELO3C025674.2 Cucumis melo HOM05D000842 ORTHO05D000650 6.4e-08 62.4 178 37.6
CsaV3_4G032790 Cucumis sativus L. HOM05D000842 ORTHO05D000650 6.4e-08 62.4 178 30.3
FAN21G0331 Fragaria x ananassa HOM05D000842 ORTHO05D000650 6.4e-08 62.4 182 41.2
Nitab4.5_0001140g0080 Nicotiana tabacum HOM05D000842 ORTHO05D000650 6.4e-08 62.4 173 50.9
Nitab4.5_0003618g0010 Nicotiana tabacum HOM05D000842 ORTHO05D000650 6.4e-08 62.4 173 50.9
Prupe.4G155500 Prunus persica HOM05D000842 ORTHO05D000650 6.4e-08 62.4 178 43.8
GSVIVG01021318001 Vitis vinifera HOM05D000842 ORTHO05D000650 6.4e-08 62.4 178 37.1
RcHm_v2.0_Chr5g0029311 Rosa chinensis HOM05D000842 ORTHO05D000650 8.4e-08 62.0 182 43.4
vmacro09419 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 1.1e-07 61.6 182 52.7
VMungo1080G0610 Vigna mungo HOM05D000842 ORTHO05D000650 1.1e-07 61.6 177 37.9
CSS0006711 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 1.4e-07 61.2 179 51.4
Glyma.08G149000 Glycine max HOM05D000842 ORTHO05D000650 1.4e-07 61.2 177 39.0
HanXRQChr15g0495361 Helianthus annuus HOM05D000842 ORTHO05D000650 1.4e-07 61.2 176 51.1
Medtr2g060900 Medicago truncatula HOM05D000842 ORTHO05D000650 1.4e-07 61.2 185 37.8
PGR031G0859 Punica granatum HOM05D000842 ORTHO05D000650 1.4e-07 61.2 177 36.7
ECA247G2646 Erigeron canadensis HOM05D000842 ORTHO05D000650 1.9e-07 60.8 185 26.5
Peaxi162Scf00111g10127 Petunia axillaris HOM05D000842 ORTHO05D000650 1.9e-07 60.8 173 49.7
Phvul.005G039800 Phaseolus vulgaris HOM05D000842 ORTHO05D000650 1.9e-07 60.8 177 27.7
CiPaw.13G071300 Carya illinoinensis HOM05D000842 ORTHO05D000650 2.4e-07 60.5 157 29.9
COL.COLO4_03606 Corchorus olitorius HOM05D000842 ORTHO05D000650 2.4e-07 60.5 176 26.7
DCAR_019619 Daucus carota HOM05D000842 ORTHO05D000650 2.4e-07 60.5 183 51.9
Hma1.2p1_0713F.1_g207890 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 2.4e-07 60.5 178 46.6
Sp4g12710 Schrenkiella parvula HOM05D000842 ORTHO05D000650 2.4e-07 60.5 183 27.9
Aqoxy4G00170 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 3.2e-07 60.1 179 42.5
Gohir.D01G037700 Gossypium hirsutum HOM05D000842 ORTHO05D000650 3.2e-07 60.1 181 26.0
Gorai.002G046000 Gossypium raimondii HOM05D000842 ORTHO05D000650 3.2e-07 60.1 181 26.0
Psat1g128080 Pisum sativum HOM05D000842 ORTHO05D000650 3.2e-07 60.1 185 34.6
TWI38G0350 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 3.2e-07 60.1 178 47.8
CiPaw.12G110100 Carya illinoinensis HOM05D000842 ORTHO05D000650 4.1e-07 59.7 179 51.4
HanXRQChr04g0103751 Helianthus annuus HOM05D000842 ORTHO05D000650 4.1e-07 59.7 156 32.7
Pp3c8_1900 Physcomitrium patens HOM05D000842 ORTHO05D000650 4.1e-07 59.7 178 24.2
Sabra16G0252400 Salix brachista HOM05D000842 ORTHO05D000650 4.1e-07 59.7 183 27.3
CSS0023437 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 5.4e-07 59.3 79 38.0
Carub.0004s1127 Capsella rubella HOM05D000842 ORTHO05D000650 5.4e-07 59.3 189 28.6
Gorai.009G361700 Gossypium raimondii HOM05D000842 ORTHO05D000650 5.4e-07 59.3 176 26.7
Ciclev10021239m.g Citrus clementina HOM05D000842 ORTHO05D000650 7.1e-07 58.9 178 36.0
Gohir.D05G337400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 7.1e-07 58.9 176 26.1
PSO384G4265 Papaver somniferum HOM05D000842 ORTHO05D000650 7.1e-07 58.9 187 30.5
TPR.G11742 Trifolium pratense HOM05D000842 ORTHO05D000650 7.1e-07 58.9 185 34.6
arahy.Tifrunner.gnm1.ann1.B9TNKV Arachis hypogaea HOM05D000842 ORTHO05D000650 9.2e-07 58.5 176 47.7
Lj3g0009813 Lotus japonicus HOM05D000842 ORTHO05D000650 9.2e-07 58.5 178 27.5
PSO339G0819 Papaver somniferum HOM05D000842 ORTHO05D000650 9.2e-07 58.5 187 24.1
Thecc.07G134900 Theobroma cacao HOM05D000842 ORTHO05D000650 9.2e-07 58.5 183 25.7
arahy.Tifrunner.gnm1.ann1.68BB74 Arachis hypogaea HOM05D000842 ORTHO05D000650 1.2e-06 58.2 175 48.0
AUR62001887 Chenopodium quinoa HOM05D000842 ORTHO05D000650 1.2e-06 58.2 189 25.9
EL10Ac7g15905 Beta vulgaris HOM05D000842 ORTHO05D000650 1.6e-06 57.8 189 27.5
Gohir.A04G045400 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.6e-06 57.8 176 26.1
RhsimUnG0206200 Rhododendron simsii HOM05D000842 ORTHO05D000650 2.1e-06 57.4 178 44.9
TWI39G0754 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 2.1e-06 57.4 176 42.0
Actinidia00874 Actinidia chinensis HOM05D000842 ORTHO05D000650 2.7e-06 57.0 182 40.1
Lalb_Chr04g0252021 Lupinus albus HOM05D000842 ORTHO05D000650 2.7e-06 57.0 186 26.3
Hund05032 Selenicereus undatus HOM05D000842 ORTHO05D000650 2.7e-06 57.0 177 26.6
Glyma.15G269300 Glycine max HOM05D000842 ORTHO05D000650 3.5e-06 56.6 177 32.8
SEGI_10988 Sequoiadendron giganteum HOM05D000842 ORTHO05D000650 3.5e-06 56.6 177 24.3
SEGI_02504 Sequoiadendron giganteum HOM05D000842 ORTHO05D000650 4.6e-06 56.2 173 25.4
THA.LOC104822582 Tarenaya hassleriana HOM05D000842 ORTHO05D000650 6.0e-06 55.8 171 26.9
Zm00001eb322370 Zea mays HOM05D000842 ORTHO05D000650 6.0e-06 55.8 175 28.0
Gohir.A01G047000 Gossypium hirsutum HOM05D000842 ORTHO05D000650 7.8e-06 55.5 181 24.9
Rhsim01G0240100 Rhododendron simsii HOM05D000842 ORTHO05D000650 7.8e-06 55.5 180 39.4


User provided reference genes

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