Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 5.1e-51 204.1 104 100.0
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 4.2e-37 157.9 104 73.1
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.3e-33 146.4 104 73.1
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.3e-30 136.3 94 70.2
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.9e-30 135.2 107 64.5
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 2.9e-30 135.2 94 70.2
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 8.4e-30 133.7 91 71.4
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 1.1e-29 133.3 99 65.7
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-29 133.3 107 63.6
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 1.1e-29 133.3 96 67.7
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 1.4e-29 132.9 91 71.4
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 1.4e-29 132.9 101 67.3
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.9e-29 132.5 93 64.5
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 4.2e-29 131.3 93 66.7
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 7.1e-29 130.6 86 73.3
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 7.1e-29 130.6 92 63.0
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.6e-28 129.4 106 64.2
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.6e-28 129.4 96 68.8
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 2.1e-28 129.0 95 66.3
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 2.1e-28 129.0 87 71.3
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 2.7e-28 128.6 88 69.3
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 2.7e-28 128.6 95 67.4
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 3.5e-28 128.3 115 59.1
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 3.5e-28 128.3 100 66.0
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 4.6e-28 127.9 95 68.4
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 6.0e-28 127.5 90 68.9
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 7.9e-28 127.1 93 65.6
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 7.9e-28 127.1 87 66.7
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 7.9e-28 127.1 88 67.0
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 1.3e-27 126.3 93 66.7
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 1.3e-27 126.3 92 66.3
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.8e-27 125.9 93 66.7
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.8e-27 125.9 106 61.3
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.8e-27 125.9 93 65.6
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 3.0e-27 125.2 94 66.0
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 5.1e-27 124.4 106 62.3
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 5.1e-27 124.4 81 70.4
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 6.7e-27 124.0 86 65.1
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 8.7e-27 123.6 106 59.4
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 8.7e-27 123.6 106 59.4
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 8.7e-27 123.6 106 59.4
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 8.7e-27 123.6 106 61.3
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 8.7e-27 123.6 86 67.4
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.1e-26 123.2 95 64.2
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 1.5e-26 122.9 90 64.4
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.5e-26 122.9 86 66.3
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.9e-26 122.5 93 62.4
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.9e-26 122.5 93 61.3
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.5e-26 122.1 91 65.9
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 2.5e-26 122.1 91 65.9
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 2.5e-26 122.1 93 63.4
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 3.3e-26 121.7 94 62.8
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 3.3e-26 121.7 88 64.8
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 3.3e-26 121.7 88 64.8
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 3.3e-26 121.7 88 62.5
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 3.3e-26 121.7 87 67.8
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 3.3e-26 121.7 86 66.3
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 3.3e-26 121.7 90 65.6
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 5.7e-26 120.9 100 60.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 5.7e-26 120.9 101 63.4
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 9.6e-26 120.2 102 60.8
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.3e-25 119.8 86 67.4
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.6e-25 119.4 92 62.0
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 1.6e-25 119.4 93 61.3
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 1.6e-25 119.4 99 56.6
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.1e-25 119.0 99 59.6
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 2.1e-25 119.0 99 59.6
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 2.1e-25 119.0 83 66.3
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 2.8e-25 118.6 104 57.7
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 2.8e-25 118.6 83 65.1
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.7e-25 118.2 90 64.4
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 4.8e-25 117.9 88 63.6
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 6.2e-25 117.5 91 61.5
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 8.2e-25 117.1 86 62.8
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.1e-24 116.7 99 57.6
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.4e-24 116.3 87 62.1
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.4e-24 116.3 99 57.6
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.4e-24 116.3 99 57.6
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.4e-24 116.3 99 57.6
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 1.4e-24 116.3 88 64.8
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 2.4e-24 115.5 94 59.6
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 2.4e-24 115.5 94 59.6
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 2.4e-24 115.5 104 58.7
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 3.1e-24 115.2 99 56.6
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 3.1e-24 115.2 88 61.4
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 5.3e-24 114.4 95 58.9
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 6.9e-24 114.0 80 65.0
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 6.9e-24 114.0 100 57.0
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 9.0e-24 113.6 93 59.1
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 4.5e-23 111.3 81 64.2
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 4.5e-23 111.3 97 56.7
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 7.6e-23 110.5 96 56.2
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 7.6e-23 110.5 81 65.4
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.0e-22 110.2 101 53.5
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 2.2e-22 109.0 81 64.2
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 2.9e-22 108.6 101 54.5
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 6.5e-22 107.5 93 59.1
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 6.5e-22 107.5 80 61.2
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 1.1e-21 106.7 80 60.0
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 1.2e-20 103.2 89 53.9
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 3.0e-19 98.6 77 63.6
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 8.7e-19 97.1 80 56.2
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.5e-18 96.3 86 47.7
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 3.3e-18 95.1 101 50.5
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 3.3e-18 95.1 86 46.5
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 1.4e-16 89.7 98 43.9
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 5.3e-16 87.8 63 65.1
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 2.2e-14 82.4 83 47.0
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 3.2e-13 78.6 99 42.4
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 7.9e-12 73.9 67 53.7
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 1.5e-10 69.7 83 41.0
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 9.7e-10 67.0 81 38.3
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 2.8e-09 65.5 80 40.0
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.4e-08 63.2 82 43.9


User provided reference genes

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