Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 1.5e-82 309.3 139 100.0
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 1.5e-66 256.1 142 80.3
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 3.8e-62 241.5 142 76.1
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 2.0e-55 219.2 119 80.7
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 3.5e-55 218.4 142 71.1
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 4.5e-55 218.0 108 86.1
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 4.5e-55 218.0 142 68.3
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 7.7e-55 217.2 105 85.7
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 1.7e-54 216.1 108 85.2
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 1.7e-54 216.1 127 75.6
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 2.3e-54 215.7 107 86.0
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 2.9e-54 215.3 108 83.3
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 2.9e-54 215.3 142 69.7
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 3.8e-54 214.9 108 85.2
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 6.6e-54 214.2 140 70.7
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 8.6e-54 213.8 112 81.2
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 8.6e-54 213.8 108 83.3
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.9e-53 212.6 143 67.8
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 2.5e-53 212.2 112 82.1
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 3.3e-53 211.8 150 65.3
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 7.2e-53 210.7 104 84.6
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.2e-52 209.9 144 66.7
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 1.6e-52 209.5 105 84.8
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 3.6e-52 208.4 105 82.9
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 8.0e-52 207.2 144 66.0
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.0e-51 206.8 109 78.9
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 1.4e-51 206.5 105 82.9
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 1.4e-51 206.5 108 80.6
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 1.8e-51 206.1 110 80.0
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 1.8e-51 206.1 105 81.9
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 2.3e-51 205.7 109 78.9
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 3.0e-51 205.3 105 82.9
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 5.2e-51 204.5 107 81.3
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 5.2e-51 204.5 104 82.7
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 5.2e-51 204.5 108 78.7
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 6.8e-51 204.1 105 81.0
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 6.8e-51 204.1 108 76.9
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 8.9e-51 203.8 106 79.2
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.2e-50 203.4 105 81.0
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.2e-50 203.4 105 81.0
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 2.6e-50 202.2 110 76.4
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 4.4e-50 201.4 105 81.9
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.3e-49 199.9 112 74.1
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 2.9e-49 198.7 109 78.0
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 3.7e-49 198.4 116 70.7
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 3.7e-49 198.4 116 70.7
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.7e-49 198.4 109 78.0
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 6.4e-49 197.6 109 77.1
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 1.8e-48 196.1 104 78.8
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 3.2e-48 195.3 110 72.7
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 4.1e-48 194.9 112 74.1
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 4.1e-48 194.9 110 73.6
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 7.0e-48 194.1 165 56.4
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 2.7e-47 192.2 105 76.2
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 2.7e-47 192.2 146 57.5
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 4.6e-47 191.4 108 75.0
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 4.3e-45 184.9 107 73.8
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 5.6e-45 184.5 91 84.6
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 9.5e-45 183.7 104 72.1
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 4.7e-44 181.4 105 72.4
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 4.9e-41 171.4 115 63.5
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.4e-40 169.1 100 71.0
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 3.5e-39 165.2 88 79.5
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 1.3e-38 163.3 115 62.6
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 1.2e-36 156.8 76 86.8
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 2.1e-36 156.0 106 67.9
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 4.7e-36 154.8 77 84.4
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 7.1e-32 141.0 74 82.4
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 4.0e-27 125.2 74 66.2
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 5.2e-27 124.8 74 66.2
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 7.8e-23 110.9 79 62.0
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 7.6e-18 94.4 52 71.2
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 1.6e-07 60.1 32 71.9
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 3.5e-07 58.9 32 71.9
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 6.0e-07 58.2 38 57.9


User provided reference genes

Program Settings