Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 5.3e-201 704.1 350 100.0
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 7.0e-129 464.5 348 68.7
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.4e-121 439.5 306 76.8
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 2.3e-119 433.0 346 62.1
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 4.3e-118 428.7 345 61.7
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 3.6e-117 425.6 346 60.4
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 6.8e-116 421.4 348 59.5
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.0e-115 419.9 347 60.2
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 2.6e-115 419.5 346 60.4
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 5.4e-113 411.8 346 59.0
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 5.4e-113 411.8 346 59.0
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 9.2e-113 411.0 347 58.5
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.2e-112 410.6 318 64.5
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 6.0e-112 408.3 344 58.7
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 6.0e-112 408.3 330 60.6
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.7e-111 406.8 345 61.7
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 2.3e-111 406.4 347 58.2
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.6e-109 400.2 344 59.3
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.7e-109 398.7 347 58.5
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 1.4e-108 397.1 344 59.3
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.8e-108 396.7 331 58.9
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 3.1e-108 396.0 345 58.6
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 4.0e-108 395.6 349 58.2
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 5.2e-108 395.2 359 54.9
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 5.2e-108 395.2 347 58.2
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.2e-107 394.0 345 58.0
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.2e-107 394.0 344 59.3
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.5e-107 393.7 343 58.3
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.6e-107 392.9 344 58.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 2.6e-107 392.9 345 56.8
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 3.4e-107 392.5 350 57.4
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 4.4e-107 392.1 365 55.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 4.4e-107 392.1 345 58.0
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.2e-106 389.8 346 56.1
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 3.7e-106 389.0 349 56.4
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 3.7e-106 389.0 349 55.6
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 4.9e-106 388.7 355 55.5
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 2.4e-105 386.3 354 56.8
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 4.1e-105 385.6 348 57.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 5.4e-105 385.2 345 56.5
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 2.7e-104 382.9 328 58.8
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 2.7e-104 382.9 328 58.8
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 2.7e-104 382.9 344 57.0
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 1.0e-103 380.9 348 56.3
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.7e-103 380.2 352 55.4
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.3e-103 379.8 347 55.3
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.3e-103 379.8 352 54.8
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 3.9e-103 379.0 354 56.2
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 5.1e-103 378.6 352 54.8
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 6.6e-103 378.3 349 55.3
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 8.6e-103 377.9 344 54.9
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.1e-102 377.5 344 55.5
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 2.5e-102 376.3 349 55.6
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 9.5e-102 374.4 349 56.7
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.2e-101 374.0 349 55.6
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 3.6e-101 372.5 353 54.1
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 6.2e-101 371.7 345 55.4
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.2e-101 371.7 349 55.6
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 8.1e-101 371.3 349 52.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.4e-100 369.8 350 52.3
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.2e-100 368.6 364 53.3
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 6.8e-100 368.2 349 52.1
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.5e-99 367.1 344 53.8
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 2.0e-99 366.7 349 51.9
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 2.0e-99 366.7 349 51.9
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 3.4e-99 365.9 350 52.0
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 4.4e-99 365.5 349 52.1
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 4.4e-99 365.5 327 56.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.3e-98 364.0 347 54.2
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.7e-98 363.6 349 51.6
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.7e-98 363.6 351 54.1
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.2e-98 363.2 331 54.4
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 4.9e-98 362.1 346 54.0
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 8.4e-98 361.3 345 54.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 8.4e-98 361.3 313 61.3
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 1.9e-97 360.1 333 55.0
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 5.4e-97 358.6 349 52.4
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.2e-96 357.5 345 53.9
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.7e-95 353.6 335 53.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 2.3e-95 353.2 373 48.5
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 5.1e-95 352.1 275 66.2
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 5.6e-94 348.6 380 47.6
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.6e-94 347.8 340 53.2
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.1e-92 344.4 257 66.5
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.3e-92 342.0 254 66.9
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 6.9e-92 341.7 336 48.5
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.1e-89 334.3 345 50.4
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 9.3e-89 331.3 327 55.4
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.3e-87 326.6 266 58.6
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 1.5e-86 323.9 343 50.7
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.5e-86 323.2 351 48.1
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 6.9e-84 315.1 312 53.5
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.7e-82 310.5 329 48.0
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 7.4e-78 295.0 348 49.7
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 3.1e-76 289.7 345 47.0
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.3e-76 288.9 254 58.7
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.2e-75 287.7 269 56.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 4.8e-69 265.8 243 56.0
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.5e-67 260.8 264 51.5
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.4e-65 254.2 352 41.2
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.5e-62 244.2 312 46.2
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.4e-60 237.7 237 49.8
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.2e-59 234.6 353 37.1
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 7.2e-57 225.3 195 59.0
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.4e-55 221.1 191 50.8
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 1.3e-53 214.5 217 55.3
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 1.2e-48 198.0 245 49.0
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.2e-37 160.6 128 54.7
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 5.5e-33 146.0 126 53.2
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 2.1e-32 144.1 306 36.3
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.4e-28 131.3 147 46.3
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 7.7e-27 125.6 100 58.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 2.0e-22 110.9 189 39.2
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 1.3e-13 81.6 71 49.3
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 7.0e-12 75.9 66 53.0
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 2.5e-09 67.4 84 48.8


User provided reference genes

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