Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 0.0e+00 1655.2 847 100.0
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 0.0e+00 1117.4 856 69.5
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.5e-305 1052.7 868 63.9
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.9e-305 1052.4 868 63.8
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 5.2e-303 1044.3 866 63.0
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 5.4e-300 1034.2 865 62.5
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.0e-299 1032.3 868 62.6
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 4.7e-296 1021.1 865 61.5
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 6.4e-293 1010.7 868 61.1
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 2.4e-292 1008.8 879 61.7
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 1.1e-289 1000.0 860 60.9
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 1.5e-289 999.6 868 60.7
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 1.5e-289 999.6 867 60.8
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 1.9e-289 999.2 866 60.4
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 5.6e-289 997.7 864 60.5
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 1.2e-288 996.5 868 60.5
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 3.6e-288 995.0 860 60.7
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 4.7e-288 994.6 864 60.8
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 8.0e-288 993.8 864 60.3
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 1.1e-287 993.4 866 60.5
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 1.8e-287 992.6 878 60.4
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 6.8e-287 990.7 862 61.1
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 6.8e-287 990.7 863 60.4
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 8.9e-287 990.3 846 62.3
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 1.5e-286 989.6 827 63.5
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 7.5e-286 987.3 868 59.9
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 7.5e-286 987.3 850 61.4
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 5.4e-284 981.1 868 60.0
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 2.0e-283 979.2 861 60.5
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 1.7e-282 976.1 866 59.9
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 1.5e-281 973.0 880 59.7
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 2.5e-281 972.2 868 59.9
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 4.3e-281 971.5 868 59.8
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 1.2e-280 969.9 868 59.4
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 1.6e-280 969.5 864 59.6
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 6.2e-280 967.6 825 61.3
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 2.6e-278 962.2 865 58.6
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 3.4e-278 961.8 867 59.1
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 5.8e-278 961.1 867 59.2
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 1.7e-277 959.5 860 59.5
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 2.2e-277 959.1 865 58.6
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 4.9e-277 958.0 864 59.6
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 1.4e-276 956.4 863 58.6
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 1.4e-276 956.4 868 59.8
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 9.2e-276 953.7 867 58.5
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.2e-275 953.4 867 58.9
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 6.0e-275 951.0 862 58.4
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 1.7e-274 949.5 860 58.4
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.3e-274 949.1 867 58.7
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 2.5e-273 945.7 875 58.2
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 4.3e-273 944.9 816 61.3
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 4.3e-273 944.9 869 58.2
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 9.5e-273 943.7 850 59.2
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 1.6e-272 943.0 865 57.6
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 1.6e-272 943.0 868 58.4
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 2.4e-268 929.1 878 56.6
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 4.1e-268 928.3 868 57.3
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 5.4e-268 927.9 871 56.9
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 1.6e-267 926.4 868 57.1
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 2.7e-267 925.6 869 57.9
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 6.0e-267 924.5 864 57.8
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 8.7e-266 920.6 866 57.4
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 7.3e-265 917.5 868 57.0
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 4.0e-263 911.8 869 56.2
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 6.9e-263 911.0 868 57.3
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 1.2e-262 910.2 807 60.2
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 9.9e-262 907.1 864 57.4
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 3.9e-258 895.2 868 56.0
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 2.5e-257 892.5 867 56.4
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 3.6e-256 888.6 870 55.5
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 3.1e-255 885.6 864 55.0
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 5.3e-255 884.8 864 55.3
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 5.3e-255 884.8 865 55.6
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 3.4e-254 882.1 865 55.5
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 2.1e-251 872.8 909 53.5
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 4.6e-251 871.7 866 54.4
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 1.0e-250 870.5 866 54.5
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 1.1e-249 867.1 866 54.5
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 3.3e-249 865.5 864 54.7
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.5e-246 856.7 843 55.9
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 5.8e-246 854.7 802 58.0
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 6.0e-243 844.7 856 55.6
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 6.7e-242 841.3 805 56.5
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 3.3e-241 839.0 866 52.2
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 2.4e-239 832.8 747 59.8
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 1.5e-238 830.1 820 56.1
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 1.0e-234 817.4 826 54.0
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 6.7e-234 814.7 845 54.3
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 2.4e-231 806.2 861 51.1
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 1.2e-230 803.9 863 51.8
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 5.0e-229 798.5 857 51.7
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 1.3e-224 783.9 868 49.4
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 5.3e-223 778.5 752 56.4
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 1.0e-218 764.2 851 50.2
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 4.1e-207 725.7 819 50.2
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 6.7e-202 708.4 649 59.0
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 2.3e-194 683.3 696 56.8
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 3.4e-185 652.9 756 47.8
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 5.4e-159 565.8 743 44.8
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 3.4e-153 546.6 523 58.3
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 4.4e-145 519.6 428 63.3
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 1.3e-133 481.5 858 36.2
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 5.5e-127 459.5 836 35.8
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 6.0e-126 456.1 836 36.1
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 1.6e-89 335.1 308 56.2
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 6.5e-88 329.7 996 28.5
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 2.2e-51 208.4 189 59.3
TAR629G0105 Trochodendron aralioides HOM05D006510 ORTHO05D008171 9.6e-23 113.2 102 54.9
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 6.2e-22 110.5 98 59.2
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 2.3e-16 92.0 57 80.7
Cre11.g479200 Chlamydomonas reinhardtii HOM05D006510 ORTHO05D008171 5.1e-16 90.9 564 21.8
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 2.4e-13 82.0 62 58.1
MCO09G591 Micromonas commoda HOM05D006510 ORTHO05D008171 4.0e-13 81.3 388 22.4
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 6.9e-13 80.5 62 59.7
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 3.4e-12 78.2 67 58.2
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 2.2e-11 75.5 62 54.8
BcaB01g03423 Brassica carinata HOM05D001990 ORTHO05D002033 7.1e-10 70.5 107 43.9
Lsat_1_v5_gn_9_51101 Lactuca sativa HOM05D003114 ORTHO05D003519 1.2e-09 69.7 55 65.5
BraA03t11594Z Brassica rapa HOM05D006510 ORTHO05D008171 3.5e-09 68.2 101 48.5
Solyc01g011190.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.3e-08 65.5 57 54.4
Lsat_1_v5_gn_4_67501 Lactuca sativa HOM05D001373 ORTHO05D001330 3.3e-07 61.6 41 68.3
Solyc01g011180.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 3.3e-07 61.6 57 50.9
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 2.8e-06 58.5 42 59.5


User provided reference genes

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