Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 0.0e+00 1359.4 686 100.0
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 7.7e-305 1050.0 693 75.6
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 2.2e-251 872.5 688 66.6
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 3.9e-216 755.4 703 56.2
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.5e-215 753.4 696 56.3
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 2.1e-214 749.6 696 56.0
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 2.8e-214 749.2 695 55.5
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 2.0e-212 743.0 706 55.4
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 7.6e-212 741.1 705 54.5
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 1.7e-211 740.0 712 53.4
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 9.3e-210 734.2 692 55.2
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 1.2e-209 733.8 675 55.7
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 3.0e-208 729.2 703 54.6
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 1.5e-207 726.9 707 54.5
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 9.6e-207 724.2 693 53.8
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 3.1e-205 719.2 722 53.9
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 2.6e-204 716.1 693 53.5
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.7e-203 713.4 722 53.5
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 8.4e-203 711.1 708 53.4
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 3.5e-201 705.7 709 51.3
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 6.0e-201 704.9 682 52.3
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.0e-200 704.1 695 53.7
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 1.0e-200 704.1 702 53.3
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 1.8e-200 703.4 672 54.9
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 5.1e-200 701.8 757 50.3
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 6.3e-198 694.9 695 51.8
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 1.8e-197 693.3 693 51.9
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 2.0e-196 689.9 706 50.6
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 1.7e-195 686.8 713 51.8
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 2.9e-195 686.0 706 49.4
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 8.5e-195 684.5 686 52.8
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 1.4e-194 683.7 709 50.1
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 1.9e-194 683.3 703 51.6
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.0e-192 677.6 707 50.6
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 1.8e-192 676.8 701 51.2
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 2.3e-192 676.4 701 50.4
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 6.7e-192 674.9 701 50.2
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 8.7e-192 674.5 708 50.3
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 8.7e-192 674.5 707 50.2
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 1.9e-191 673.3 707 51.2
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 2.2e-190 669.8 710 51.1
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 4.8e-190 668.7 701 49.6
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.1e-189 667.5 696 51.3
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 4.1e-189 665.6 703 50.2
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.2e-188 664.1 705 49.9
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 7.7e-188 661.4 705 49.4
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.7e-187 660.2 701 50.1
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 2.9e-187 659.4 588 57.5
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 3.8e-187 659.1 655 54.5
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 1.1e-186 657.5 694 49.7
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 4.2e-186 655.6 697 49.4
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 5.5e-186 655.2 688 50.0
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.2e-185 654.1 712 49.3
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 6.1e-185 651.7 700 49.3
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 8.8e-184 647.9 709 48.8
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 2.0e-183 646.7 705 48.7
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 7.4e-183 644.8 697 48.5
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 3.7e-182 642.5 713 48.7
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 1.8e-181 640.2 694 48.8
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 1.2e-180 637.5 708 47.5
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 5.9e-180 635.2 736 46.6
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 7.7e-180 634.8 703 48.2
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 1.7e-179 633.6 611 54.3
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 3.6e-177 625.9 704 48.2
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 1.4e-173 614.0 510 58.6
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 9.1e-173 611.3 714 46.5
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 2.6e-172 609.8 697 47.3
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 5.9e-172 608.6 709 46.8
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 1.0e-171 607.8 679 48.0
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 1.7e-171 607.1 679 48.0
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 7.2e-170 601.7 693 45.6
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 5.7e-167 592.0 691 47.3
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 7.2e-162 575.1 702 45.2
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 3.7e-158 562.8 539 54.9
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 4.8e-158 562.4 502 56.6
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 6.3e-158 562.0 609 48.6
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 3.5e-148 529.6 463 57.2
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 1.7e-147 527.3 508 52.2
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 1.5e-146 524.2 592 49.7
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 1.7e-142 510.8 447 57.0
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 1.6e-140 504.2 436 57.3
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 3.1e-136 490.0 405 59.8
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 7.3e-130 468.8 558 45.9
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 9.5e-130 468.4 608 43.9
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 1.4e-128 464.5 491 49.9
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 2.9e-126 456.8 642 41.4
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 2.9e-126 456.8 467 51.2
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.9e-125 454.1 446 54.5
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 9.5e-122 441.8 546 44.7
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 1.2e-116 424.9 537 45.8
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.0e-115 421.8 436 53.9
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 2.2e-102 377.5 494 40.3
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 3.2e-101 373.6 664 36.1
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 2.5e-98 364.0 382 50.8
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.5e-87 328.2 840 29.5
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 1.3e-86 325.1 782 29.8
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 1.2e-84 318.5 691 32.1
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 6.0e-84 316.2 691 32.0
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 8.2e-81 305.8 594 34.2
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.9e-77 294.7 224 61.6
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 3.9e-75 287.0 694 30.4
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 4.8e-73 280.0 725 29.5
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 6.7e-67 259.6 391 39.4
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 4.2e-61 240.4 207 58.5
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 1.0e-54 219.2 186 59.7
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.8e-51 208.4 317 39.4
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.2e-41 174.9 161 50.3
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 1.9e-37 161.8 219 44.7
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 1.0e-35 156.0 131 55.7
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 9.2e-32 142.9 190 38.9
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-31 142.5 305 30.8
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 4.0e-27 127.5 144 49.3
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 8.9e-27 126.3 146 45.9
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 8.9e-27 126.3 89 62.9
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 1.0e-22 112.8 234 35.0
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 8.6e-22 109.8 176 38.6
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.8e-19 102.1 244 27.9
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 2.0e-18 98.6 132 42.4
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 5.8e-18 97.1 108 47.2
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 4.3e-13 80.9 59 59.3
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 3.6e-12 77.8 62 56.5
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 4.1e-08 64.3 47 57.4
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 7.1e-08 63.5 62 50.0
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-07 62.8 59 61.0
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 3.5e-07 61.2 57 52.6


User provided reference genes

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