Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 1.0e-73 280.0 148 100.0
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 1.1e-54 216.9 149 78.5
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 5.3e-54 214.5 142 79.6
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 5.9e-37 157.9 149 59.7
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 2.3e-36 156.0 153 60.8
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 1.9e-35 152.9 151 59.6
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 1.6e-34 149.8 133 63.9
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 8.0e-34 147.5 151 58.3
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 1.4e-33 146.7 142 59.2
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 1.8e-33 146.4 153 57.5
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 1.5e-32 143.3 134 60.4
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 2.0e-32 142.9 144 57.6
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 2.6e-32 142.5 128 62.5
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 3.4e-32 142.1 150 56.7
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 7.5e-32 141.0 130 63.1
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 7.5e-32 141.0 129 60.5
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 9.8e-32 140.6 135 58.5
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 9.8e-32 140.6 149 58.4
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 3.7e-31 138.7 146 56.2
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 6.4e-31 137.9 148 55.4
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 6.4e-31 137.9 145 59.3
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 8.3e-31 137.5 176 53.4
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 1.1e-30 137.1 157 54.1
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 1.9e-30 136.3 148 54.7
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 1.9e-30 136.3 130 60.0
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 1.9e-30 136.3 141 58.2
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 2.4e-30 136.0 150 54.7
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 5.4e-30 134.8 146 55.5
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 5.4e-30 134.8 154 53.9
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 9.2e-30 134.0 128 57.8
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 9.2e-30 134.0 154 52.6
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 1.2e-29 133.7 151 53.0
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 1.6e-29 133.3 135 58.5
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 2.7e-29 132.5 128 57.0
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 4.6e-29 131.7 145 53.8
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 4.6e-29 131.7 138 55.8
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 7.8e-29 131.0 134 58.2
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 1.3e-28 130.2 147 51.0
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.3e-28 130.2 151 52.3
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 1.7e-28 129.8 176 50.6
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 2.3e-28 129.4 138 56.5
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 3.0e-28 129.0 148 53.4
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 3.9e-28 128.6 176 50.0
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 3.9e-28 128.6 139 54.7
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 5.0e-28 128.3 134 57.5
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 5.0e-28 128.3 139 53.2
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 6.6e-28 127.9 137 57.7
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 6.6e-28 127.9 135 57.8
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 6.6e-28 127.9 137 56.2
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 8.6e-28 127.5 148 51.4
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 8.6e-28 127.5 131 58.8
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 1.1e-27 127.1 133 56.4
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 3.3e-27 125.6 148 50.7
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 7.3e-27 124.4 135 54.1
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 9.5e-27 124.0 154 50.6
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.2e-26 123.6 151 50.3
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 4.7e-26 121.7 131 55.0
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 4.7e-26 121.7 141 53.2
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 6.2e-26 121.3 140 53.6
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 1.4e-25 120.2 130 55.4
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 1.8e-25 119.8 139 52.5
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 2.3e-25 119.4 140 51.4
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 4.0e-25 118.6 142 52.1
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 6.8e-25 117.9 137 52.6
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 3.4e-24 115.5 146 49.3
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 3.4e-24 115.5 95 68.4
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 4.4e-24 115.2 140 49.3
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 5.8e-24 114.8 144 49.3
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 1.3e-23 113.6 137 51.1
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 4.9e-23 111.7 149 47.7
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 8.3e-23 110.9 149 47.7
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 8.3e-23 110.9 94 63.8
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 8.3e-23 110.9 99 64.6
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 1.9e-22 109.8 142 50.0
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 1.9e-22 109.8 135 50.4
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 2.4e-22 109.4 127 55.9
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 2.4e-22 109.4 94 64.9
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 3.2e-22 109.0 141 48.2
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 1.2e-21 107.1 133 49.6
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 2.1e-21 106.3 93 65.6
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 2.1e-21 106.3 90 63.3
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 3.5e-21 105.5 135 45.9
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 7.8e-21 104.4 96 61.5
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 1.0e-20 104.0 83 68.7
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 3.0e-20 102.4 126 51.6
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 3.9e-20 102.1 144 47.2
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 1.9e-19 99.8 106 53.8
SalBow2G0496 Salvia bowleyana HOM05D006603 ORTHO05D007786 1.9e-19 99.8 121 50.4
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 1.9e-19 99.8 102 56.9
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 7.3e-19 97.8 111 55.0
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 1.2e-18 97.1 140 47.1
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 1.6e-18 96.7 110 55.5
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.6e-18 96.7 109 56.9
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 3.6e-18 95.5 123 48.0
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 4.7e-18 95.1 151 43.7
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 1.2e-16 90.5 131 45.0
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 1.2e-16 90.5 125 46.4
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.5e-16 90.1 77 64.9
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 1.5e-16 90.1 164 40.9
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 9.9e-16 87.4 135 44.4
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 9.9e-16 87.4 135 44.4
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 9.9e-16 87.4 158 39.9
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 1.3e-15 87.0 135 44.4
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 1.3e-15 87.0 135 44.4
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 2.2e-15 86.3 117 47.0
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 2.2e-15 86.3 135 43.7
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 3.7e-15 85.5 135 43.7
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 5.4e-14 81.6 126 48.4
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 7.1e-14 81.3 141 41.1
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 1.2e-13 80.5 125 41.6
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 1.6e-13 80.1 93 53.8
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 2.1e-13 79.7 93 53.8
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 2.7e-13 79.3 98 53.1
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 5.1e-12 75.1 138 39.9
SMO144G0051 Selaginella moellendorffii HOM05D002103 ORTHO05D007786 1.9e-11 73.2 141 36.2
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 2.5e-11 72.8 71 56.3
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 4.3e-11 72.0 139 41.7
Nn1g02998 Nelumbo nucifera HOM05D006603 ORTHO05D007786 8.1e-10 67.8 78 51.3
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 1.8e-09 66.6 78 56.4
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 6.8e-09 64.7 150 32.0
SMO271G0137 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 2.0e-08 63.2 132 31.1
AagrBONN_evm.TU.Sc2ySwM_228.3673 Anthoceros agrestis HOM05D002103 ORTHO05D004020 3.4e-08 62.4 142 34.5
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 3.4e-08 62.4 89 46.1
SMO308G0045 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 3.4e-08 62.4 134 29.9
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 4.4e-08 62.0 99 41.4
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 5.8e-08 61.6 90 46.7
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 2.9e-07 59.3 83 48.2
Hma1.2p1_0982F.1_g243900 Hydrangea macrophylla HOM05D002103 ORTHO05D004020 2.9e-07 59.3 142 32.4
CARHR241420 Cardamine hirsuta HOM05D002103 ORTHO05D004020 4.9e-07 58.5 151 29.8
Gohir.D06G015300 Gossypium hirsutum HOM05D002103 ORTHO05D004020 6.4e-07 58.2 138 31.2
Gohir.A06G017200 Gossypium hirsutum HOM05D002103 ORTHO05D004020 1.1e-06 57.4 138 31.2
Cc10_g04320 Coffea canephora HOM05D002103 ORTHO05D004020 1.9e-06 56.6 151 31.8
AagrBONN_evm.TU.Sc2ySwM_362.2116 Anthoceros agrestis HOM05D006603 ORTHO05D007786 2.4e-06 56.2 147 31.3
Pp3c12_23290 Physcomitrium patens HOM05D002103 ORTHO05D004020 3.2e-06 55.8 149 32.2
DCAR_019463 Daucus carota HOM05D002103 ORTHO05D004020 4.2e-06 55.5 147 28.6
CiPaw.16G045800 Carya illinoinensis HOM05D002103 ORTHO05D004020 5.4e-06 55.1 138 31.2
Actinidia23265 Actinidia chinensis HOM05D002103 ORTHO05D004020 9.2e-06 54.3 150 30.7
AL7G18190 Arabidopsis lyrata HOM05D002103 ORTHO05D004020 9.2e-06 54.3 151 29.1
GSVIVG01009523001 Vitis vinifera HOM05D002103 ORTHO05D004020 9.2e-06 54.3 141 31.2


User provided reference genes

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