Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 4.9e-61 237.7 124 100.0
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 5.9e-46 187.6 121 77.7
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 1.3e-45 186.4 118 83.1
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 3.2e-44 181.8 121 76.0
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 5.5e-44 181.0 121 76.0
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 7.2e-44 180.6 121 76.9
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 7.9e-43 177.2 121 73.6
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 1.0e-42 176.8 121 73.6
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.4e-42 176.4 121 73.6
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.4e-42 176.4 121 75.2
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.8e-42 176.0 121 73.6
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 2.3e-42 175.6 123 72.4
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 3.0e-42 175.3 121 75.2
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 3.0e-42 175.3 121 72.7
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 3.9e-42 174.9 121 73.6
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 3.9e-42 174.9 121 72.7
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 6.7e-42 174.1 121 75.2
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 8.8e-42 173.7 121 74.4
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.1e-41 173.3 121 72.7
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.1e-41 173.3 120 75.8
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 2.0e-41 172.6 118 77.1
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.0e-41 172.6 120 75.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.0e-41 172.6 120 75.8
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.3e-41 171.8 112 74.1
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 3.3e-41 171.8 120 70.8
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.3e-41 171.4 112 74.1
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.7e-41 171.0 122 70.5
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 5.7e-41 171.0 121 72.7
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 7.4e-41 170.6 117 72.6
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 7.4e-41 170.6 117 72.6
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 7.4e-41 170.6 117 72.6
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 9.7e-41 170.2 121 70.2
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 9.7e-41 170.2 121 73.6
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 9.7e-41 170.2 121 76.0
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.7e-40 169.5 121 75.2
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.7e-40 169.5 120 72.5
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 2.8e-40 168.7 117 72.6
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.8e-40 168.7 121 72.7
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 3.7e-40 168.3 120 71.7
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 4.8e-40 167.9 123 72.4
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 4.8e-40 167.9 121 74.4
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 6.3e-40 167.5 117 71.8
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 6.3e-40 167.5 117 71.8
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 8.2e-40 167.2 117 72.6
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 8.2e-40 167.2 124 71.0
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 8.2e-40 167.2 118 75.4
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 8.2e-40 167.2 117 70.9
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 8.2e-40 167.2 118 73.7
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 117 70.9
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.1e-39 166.8 119 73.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 117 70.9
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.1e-39 166.8 118 76.3
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.4e-39 166.4 124 71.8
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 1.4e-39 166.4 120 72.5
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 3.1e-39 165.2 117 69.2
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.1e-39 165.2 121 72.7
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 4.1e-39 164.9 121 69.4
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 5.3e-39 164.5 118 72.0
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 5.3e-39 164.5 120 69.2
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 5.3e-39 164.5 120 67.5
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 5.3e-39 164.5 118 75.4
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 1.2e-38 163.3 124 66.9
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.0e-38 162.5 120 69.2
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 2.0e-38 162.5 118 71.2
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.6e-38 162.2 121 70.2
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.6e-38 162.2 121 71.1
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 4.5e-38 161.4 120 66.7
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 7.7e-38 160.6 109 72.5
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 1.0e-37 160.2 121 66.9
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.3e-37 159.8 121 68.6
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.3e-37 159.8 121 68.6
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 1.7e-37 159.5 117 69.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 3.8e-37 158.3 124 66.9
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 3.8e-37 158.3 117 67.5
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 3.8e-37 158.3 120 66.7
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.4e-36 156.4 120 65.0
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.4e-36 156.4 153 58.8
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 7.2e-36 154.1 121 66.9
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 7.2e-36 154.1 114 63.2
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 7.2e-36 154.1 137 59.9
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 7.2e-36 154.1 123 65.9
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 2.1e-35 152.5 121 66.1
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 2.7e-35 152.1 118 64.4
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.6e-35 151.8 122 63.1
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 4.7e-35 151.4 118 64.4
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 4.7e-35 151.4 117 68.4
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.6e-33 145.6 105 68.6
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 4.4e-33 144.8 120 64.2
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 9.7e-33 143.7 114 58.8
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 3.7e-32 141.7 98 71.4
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 6.3e-32 141.0 172 48.8
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.0e-30 136.0 117 59.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.9e-28 129.4 90 75.6
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 3.2e-28 128.6 84 72.6
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.7e-27 125.6 89 75.3
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.6e-27 125.2 100 63.0
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 2.3e-26 122.5 90 68.9
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.1e-25 120.2 89 73.0
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.1e-25 120.2 87 74.7
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.0e-25 119.4 119 51.3
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 4.4e-25 118.2 89 68.5
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 7.5e-25 117.5 89 68.5
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 9.7e-25 117.1 93 69.9
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.3e-24 116.7 121 50.4
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 4.8e-24 114.8 87 70.1
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 1.8e-23 112.8 121 51.2
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 9.1e-23 110.5 121 51.2
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.3e-21 106.7 102 52.9
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 8.5e-21 104.0 103 46.6
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 4.2e-20 101.7 89 58.4
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.6e-17 92.4 81 54.3
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 4.1e-15 85.1 54 74.1
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 8.8e-10 67.4 120 39.2


User provided reference genes

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