Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 6.6e-218 760.8 489 100.0
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 1.3e-133 480.7 498 71.9
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 7.3e-132 474.9 499 70.9
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 5.0e-117 425.6 496 65.7
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 1.5e-73 281.2 470 56.6
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 5.8e-73 279.3 447 58.4
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 2.3e-69 267.3 461 49.2
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.1e-68 265.0 451 57.6
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 1.9e-68 264.2 461 48.8
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.5e-68 263.8 486 54.5
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 7.4e-68 262.3 469 54.6
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 1.8e-66 257.7 428 49.8
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.2e-65 255.0 475 55.2
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.3e-64 251.5 465 54.4
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 2.9e-64 250.4 448 56.5
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 8.5e-64 248.8 485 46.2
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 8.5e-64 248.8 472 46.2
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.9e-63 247.7 431 51.0
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 4.2e-63 246.5 431 51.0
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 4.6e-62 243.0 482 52.7
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 6.1e-62 242.7 489 51.9
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 1.8e-61 241.1 460 53.7
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 2.3e-61 240.7 493 51.9
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 3.0e-61 240.4 444 54.7
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 3.0e-61 240.4 484 52.5
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 1.6e-59 234.6 438 55.5
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 3.7e-59 233.4 412 54.9
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 8.2e-59 232.3 433 53.3
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 1.4e-58 231.5 438 55.3
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 4.1e-58 229.9 442 53.6
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 2.2e-56 224.2 429 53.8
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 6.5e-56 222.6 440 52.7
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 1.4e-55 221.5 439 52.6
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 1.4e-55 221.5 431 54.1
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 1.9e-55 221.1 448 53.8
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 2.5e-55 220.7 440 52.5
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 5.5e-55 219.5 448 53.3
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 7.2e-55 219.2 472 51.5
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 4.6e-54 216.5 444 52.3
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 6.1e-54 216.1 472 51.1
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 7.9e-54 215.7 478 51.9
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 1.4e-53 214.9 443 42.4
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 1.4e-53 214.9 463 51.2
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 5.1e-53 213.0 429 53.4
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 6.7e-53 212.6 433 53.1
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 6.7e-53 212.6 494 39.3
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 2.6e-52 210.7 477 51.4
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 5.7e-52 209.5 447 50.8
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 3.7e-51 206.8 460 51.3
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 4.8e-51 206.5 457 50.1
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 6.3e-51 206.1 424 52.6
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 1.8e-50 204.5 495 49.3
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 3.1e-50 203.8 463 50.1
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.5e-49 201.4 383 58.0
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 7.7e-49 199.1 449 51.7
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 4.2e-47 193.4 194 52.6
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 3.6e-46 190.3 185 53.0
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 4.7e-46 189.9 190 51.6
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 7.4e-44 182.6 164 53.0
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 9.7e-44 182.2 181 48.1
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 6.3e-43 179.5 184 48.9
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 1.4e-42 178.3 488 47.1
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 3.1e-42 177.2 433 49.7
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 1.6e-41 174.9 173 50.9
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.5e-39 168.3 379 55.1
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 3.3e-36 157.1 422 49.1
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 2.8e-35 154.1 121 66.9
Manes.05G199032 Manihot esculenta HOM05D007897 ORTHO05D010061 5.2e-29 133.3 327 57.5
arahy.Tifrunner.gnm1.ann1.EZRM4Y Arachis hypogaea HOM05D007897 ORTHO05D010061 5.0e-24 116.7 338 55.3
HanXRQChr09g0243531 Helianthus annuus HOM05D007897 ORTHO05D010061 8.3e-19 99.4 83 57.8
Prupe.1G171300 Prunus persica HOM05D007897 ORTHO05D010061 5.4e-18 96.7 119 39.5
Thhalv10027431m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 1.8e-13 81.6 106 37.7
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 3.0e-13 80.9 199 34.7
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 3.0e-13 80.9 213 33.8
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 8.9e-13 79.3 213 33.3
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 1.2e-12 79.0 206 32.5
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 2.0e-12 78.2 212 34.0
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 2.6e-12 77.8 201 34.8
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 9.8e-12 75.9 206 33.0
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 1.7e-11 75.1 207 30.9
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.2e-11 74.7 206 32.5
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 6.4e-11 73.2 202 31.2
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 1.1e-10 72.4 207 30.9
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 1.4e-10 72.0 206 29.6
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.4e-10 72.0 406 35.2
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 2.4e-10 71.2 203 30.5
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 3.2e-10 70.9 201 29.9
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 4.1e-10 70.5 201 29.9
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 4.1e-10 70.5 187 28.3
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 5.4e-10 70.1 201 29.4
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 5.4e-10 70.1 202 31.2
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 5.4e-10 70.1 201 29.9
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 5.4e-10 70.1 201 29.9
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 5.4e-10 70.1 195 30.8
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 7.0e-10 69.7 201 29.9
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 9.2e-10 69.3 201 29.4
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.2e-09 68.9 204 29.4
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.2e-09 68.9 204 29.4
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 1.6e-09 68.6 203 30.5
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 1.6e-09 68.6 204 30.4
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 1.6e-09 68.6 204 29.4
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 1.6e-09 68.6 200 30.0
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 1.6e-09 68.6 200 30.0
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 3.5e-09 67.4 206 31.1
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 5.9e-09 66.6 195 26.7
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 7.8e-09 66.2 207 28.5
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 1.0e-08 65.9 204 27.9
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 1.0e-08 65.9 199 30.2
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 1.3e-08 65.5 208 31.7
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 1.7e-08 65.1 201 28.9
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.0e-08 64.3 187 29.9
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 5.0e-08 63.5 196 27.6
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 8.6e-08 62.8 196 31.1
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 4.3e-07 60.5 203 28.6
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 9.5e-07 59.3 205 29.8
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 9.5e-07 59.3 141 29.8
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 1.6e-06 58.5 205 28.3
A02p10540 Brassica napus HOM05D007897 ORTHO05D010061 2.1e-06 58.2 63 44.4
Gorai.002G182100 Gossypium raimondii HOM05D007897 ORTHO05D010061 2.1e-06 58.2 104 37.5
Gohir.D01G146401 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.8e-06 57.8 61 45.9
Gorai.001G135500 Gossypium raimondii HOM05D007897 ORTHO05D010061 2.8e-06 57.8 82 41.5
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 3.6e-06 57.4 187 28.3
Gohir.D07G125650 Gossypium hirsutum HOM05D007897 ORTHO05D010061 3.6e-06 57.4 81 42.0


User provided reference genes

Program Settings