Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 2.1e-86 322.4 168 100.0
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 1.1e-42 177.2 169 62.1
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 8.5e-32 141.0 171 55.0
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 4.0e-29 132.1 169 49.1
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 5.7e-28 128.3 177 45.8
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 7.5e-28 127.9 165 50.3
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 9.8e-28 127.5 178 44.4
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 1.7e-27 126.7 172 49.4
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 3.7e-27 125.6 177 45.8
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 6.3e-27 124.8 171 48.5
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 8.3e-27 124.4 166 44.6
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 1.4e-26 123.6 164 47.6
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 2.4e-26 122.9 164 46.3
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 4.1e-26 122.1 191 42.9
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 4.1e-26 122.1 190 42.1
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 7.0e-26 121.3 177 46.3
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 9.1e-26 120.9 165 46.1
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 9.1e-26 120.9 186 44.6
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.6e-25 120.2 166 45.8
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 1.6e-25 120.2 164 47.0
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 2.0e-25 119.8 167 47.3
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 4.5e-25 118.6 169 44.4
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 4.5e-25 118.6 164 47.0
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 1.3e-24 117.1 164 47.6
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 2.9e-24 115.9 164 47.6
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 2.9e-24 115.9 164 46.3
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 5.0e-24 115.2 119 56.3
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 8.5e-24 114.4 182 46.2
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.1e-23 114.0 107 60.7
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 1.5e-23 113.6 171 47.4
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 1.5e-23 113.6 177 44.1
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 1.5e-23 113.6 165 49.7
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 3.2e-23 112.5 170 48.2
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 4.2e-23 112.1 127 52.8
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 4.2e-23 112.1 119 52.9
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 5.5e-23 111.7 167 43.7
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 5.5e-23 111.7 168 43.5
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 5.5e-23 111.7 179 43.0
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 9.4e-23 110.9 118 53.4
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.6e-22 110.2 132 53.8
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 1.6e-22 110.2 171 46.2
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 2.1e-22 109.8 186 41.9
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 2.7e-22 109.4 180 47.8
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 2.7e-22 109.4 165 44.8
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 6.1e-22 108.2 172 43.0
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.0e-21 107.5 111 58.6
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 1.4e-21 107.1 171 42.7
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 2.3e-21 106.3 171 43.9
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 8.8e-21 104.4 168 42.3
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.0e-20 103.2 168 42.3
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.0e-20 103.2 168 42.3
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 3.4e-20 102.4 171 45.0
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 4.4e-20 102.1 166 44.6
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 5.7e-20 101.7 157 40.1
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 9.8e-20 100.9 110 58.2
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 9.8e-20 100.9 122 52.5
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 1.3e-19 100.5 112 56.2
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 1.7e-19 100.1 170 42.9
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 2.8e-19 99.4 166 41.0
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 1.4e-18 97.1 155 44.5
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 2.4e-18 96.3 163 42.9
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 3.1e-18 95.9 165 42.4
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 4.1e-18 95.5 149 40.3
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 4.1e-18 95.5 164 43.9
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 7.0e-18 94.7 102 52.0
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 9.2e-18 94.4 166 38.6
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 1.2e-17 94.0 119 52.1
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 1.6e-17 93.6 165 43.6
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 3.5e-17 92.4 153 44.4
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 3.5e-17 92.4 154 44.8
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 4.5e-17 92.0 166 44.6
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 5.9e-17 91.7 165 40.6
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 5.9e-17 91.7 176 42.0
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 7.7e-17 91.3 149 45.0
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 1.3e-16 90.5 165 40.6
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 1.3e-16 90.5 165 43.0
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 1.3e-16 90.5 96 52.1
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 1.7e-16 90.1 167 43.1
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.7e-16 90.1 168 37.5
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 1.7e-16 90.1 174 42.0
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 2.9e-16 89.4 165 41.2
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 3.8e-16 89.0 165 41.2
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 3.8e-16 89.0 147 43.5
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 1.9e-15 86.7 155 41.3
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 2.5e-15 86.3 103 51.5
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 3.3e-15 85.9 165 40.0
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 3.3e-15 85.9 114 48.2
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 4.3e-15 85.5 102 52.0
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 4.3e-15 85.5 174 36.8
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 9.5e-15 84.3 165 42.4
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 4.7e-14 82.0 105 50.5
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 1.0e-13 80.9 165 41.8
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 1.4e-13 80.5 165 41.2
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 1.4e-13 80.5 165 41.2
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 2.3e-13 79.7 165 40.6
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 2.3e-13 79.7 98 51.0
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 6.8e-13 78.2 165 38.8
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 2.6e-12 76.3 159 42.1
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.6e-12 76.3 154 39.0
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 3.4e-12 75.9 165 41.8
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 7.5e-12 74.7 78 52.6
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 1.3e-11 73.9 168 36.3
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 1.7e-11 73.6 78 53.8
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 4.9e-11 72.0 82 48.8
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 8.3e-11 71.2 59 61.0
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 4.1e-10 68.9 166 36.1
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 9.2e-10 67.8 137 38.7
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 9.2e-10 67.8 116 43.1
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 2.5e-07 59.7 82 50.0
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 1.2e-06 57.4 171 33.9
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.1e-06 56.6 44 54.5
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 4.7e-06 55.5 103 44.7


User provided reference genes

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