Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 1.3e-30 136.0 77 100.0
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 1.9e-18 95.5 77 67.5
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 1.2e-17 92.8 74 67.6
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 1.1e-13 79.7 77 53.2
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 1.8e-13 79.0 77 58.4
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 4.1e-13 77.8 79 54.4
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 9.1e-13 76.6 77 57.1
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.2e-12 76.3 76 52.6
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 2.0e-12 75.5 77 53.2
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 2.6e-12 75.1 77 53.2
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 5.9e-12 73.9 77 55.8
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.0e-11 73.2 78 53.8
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.0e-11 73.2 78 53.8
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 1.3e-11 72.8 77 54.5
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 2.9e-11 71.6 78 55.1
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.9e-11 71.6 78 53.8
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.9e-11 71.6 78 53.8
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.8e-11 71.2 77 53.2
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.8e-11 71.2 77 53.2
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 1.4e-10 69.3 77 50.6
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.4e-10 69.3 73 53.4
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.4e-10 69.3 77 50.6
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 1.9e-10 68.9 77 49.4
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 2.5e-10 68.6 77 49.4
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 2.5e-10 68.6 77 50.6
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 4.2e-10 67.8 77 49.4
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 4.2e-10 67.8 77 53.2
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 9.4e-10 66.6 77 51.9
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 1.2e-09 66.2 77 50.6
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 2.1e-09 65.5 74 47.3
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 2.1e-09 65.5 77 45.5
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 2.1e-09 65.5 77 49.4
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 3.6e-09 64.7 77 48.1
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 4.6e-09 64.3 77 46.8
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 4.6e-09 64.3 77 48.1
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 4.6e-09 64.3 77 48.1
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 4.6e-09 64.3 74 48.6
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 6.1e-09 63.9 77 46.8
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 6.1e-09 63.9 74 54.1
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 6.1e-09 63.9 72 55.6
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 1.0e-08 63.2 77 49.4
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.4e-08 62.8 74 47.3
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 1.8e-08 62.4 77 53.2
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 1.8e-08 62.4 77 46.8
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 2.3e-08 62.0 79 48.1
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 3.9e-08 61.2 77 42.9
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.9e-08 61.2 77 44.2
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 5.1e-08 60.8 72 47.2
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 6.7e-08 60.5 72 47.2
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 8.8e-08 60.1 77 45.5
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 8.8e-08 60.1 78 48.7
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 1.1e-07 59.7 51 62.7
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 2.0e-07 58.9 77 44.2
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.6e-07 58.5 74 45.9
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.6e-07 58.5 77 42.9
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 2.6e-07 58.5 77 42.9
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 3.3e-07 58.2 77 42.9
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 3.3e-07 58.2 50 62.0
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 4.4e-07 57.8 77 42.9
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 4.4e-07 57.8 77 45.5
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 5.7e-07 57.4 50 60.0
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 5.7e-07 57.4 79 41.8
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 7.4e-07 57.0 47 63.8
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 9.7e-07 56.6 77 42.9
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 9.7e-07 56.6 77 46.8
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 9.7e-07 56.6 50 60.0
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 9.7e-07 56.6 78 46.2
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 9.7e-07 56.6 74 44.6
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 9.7e-07 56.6 74 44.6
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-06 56.2 77 44.2
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-06 56.2 77 44.2
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.3e-06 56.2 77 42.9
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.3e-06 56.2 47 61.7
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.3e-06 56.2 47 61.7
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.3e-06 56.2 47 61.7
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 1.7e-06 55.8 77 42.9
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 2.2e-06 55.5 77 41.6
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 2.2e-06 55.5 77 41.6
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 2.2e-06 55.5 77 41.6
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 2.2e-06 55.5 77 41.6
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 2.2e-06 55.5 77 41.6
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 2.8e-06 55.1 77 45.5
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 2.8e-06 55.1 76 40.8
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.7e-06 54.7 77 42.9
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.8e-06 54.3 77 41.6
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 4.8e-06 54.3 77 48.1
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 8.2e-06 53.5 72 41.7
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 8.2e-06 53.5 72 41.7
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 8.2e-06 53.5 72 41.7
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 8.2e-06 53.5 77 42.9


User provided reference genes

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