Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1318 Erigeron canadensis HOM05D003376 ORTHO05D001185 0.0e+00 1372.5 679 100.0
ECA246G2607 Erigeron canadensis HOM05D003326 ORTHO05D001185 0.0e+00 1283.9 685 93.4
ECA234G2242 Erigeron canadensis HOM05D000088 ORTHO05D001030 0.0e+00 1096.3 573 94.1
ECA236G2931 Erigeron canadensis HOM05D003376 ORTHO05D001185 2.4e-287 991.9 679 76.7
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-257 892.9 570 80.9
ECA248G3630 Erigeron canadensis HOM05D003376 ORTHO05D001185 5.0e-216 755.0 394 91.4
HanXRQChr10g0281981 Helianthus annuus HOM05D003376 ORTHO05D001185 3.2e-154 549.7 748 44.9
HanXRQChr09g0267851 Helianthus annuus HOM05D003376 ORTHO05D001185 1.8e-152 543.9 754 44.6
HanXRQChr09g0262491 Helianthus annuus HOM05D003376 ORTHO05D001185 1.1e-151 541.2 755 45.0
HanXRQChr09g0262521 Helianthus annuus HOM05D003376 ORTHO05D001185 2.8e-150 536.6 743 45.2
HanXRQChr09g0262541 Helianthus annuus HOM05D003326 ORTHO05D001185 4.0e-104 383.3 364 58.5
ECA247G1448 Erigeron canadensis HOM05D003376 ORTHO05D001185 6.8e-96 355.9 185 88.1
HanXRQChr09g0262531 Helianthus annuus HOM05D003376 ORTHO05D001185 4.6e-92 343.2 240 70.4
ECA238G0015 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-84 317.0 174 84.5
ECA238G4345 Erigeron canadensis HOM05D003376 ORTHO05D001185 6.4e-78 296.2 146 93.2
HanXRQChr09g0262551 Helianthus annuus HOM05D003376 ORTHO05D001185 1.3e-65 255.4 163 74.2
Thhalv10023188m.g Eutrema salsugineum HOM05D003376 ORTHO05D000002 9.3e-61 239.2 270 46.3
ECA247G2059 Erigeron canadensis HOM05D003376 ORTHO05D001185 1.2e-60 238.8 153 82.4
Thhalv10028344m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.3e-59 234.6 270 45.6
Thhalv10012231m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 6.7e-59 233.0 270 45.2
Thhalv10002230m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.6e-52 211.8 269 43.1
ECA238G0435 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.0e-48 196.1 155 64.5
Thhalv10003477m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.2e-47 195.7 231 45.5
Atru.chr7.181 Acer truncatum HOM05D005324 ORTHO05D001185 4.8e-41 173.7 323 33.7
Lj2g0007658 Lotus japonicus HOM05D005324 ORTHO05D001185 7.7e-39 166.4 293 36.2
Atru.chr4.1769 Acer truncatum HOM05D005324 ORTHO05D001185 6.5e-38 163.3 252 36.9
Lj6g0018849 Lotus japonicus HOM05D005324 ORTHO05D001185 6.5e-38 163.3 244 39.3
A09p27420 Brassica napus HOM05D003376 ORTHO05D001185 4.2e-37 160.6 276 35.5
ECA248G2939 Erigeron canadensis HOM05D003376 ORTHO05D011089 7.2e-37 159.8 299 32.8
A06p25220 Brassica napus HOM05D003376 ORTHO05D001185 9.4e-37 159.5 279 33.3
Ca_11659_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.2e-36 159.1 290 33.4
Thhalv10001103m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.7e-36 157.9 264 36.4
A05p12450 Brassica napus HOM05D003376 ORTHO05D001185 6.1e-36 156.8 276 34.8
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 7.9e-36 156.4 270 35.6
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 7.9e-36 156.4 270 35.6
Ca_14742_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.0e-35 156.0 264 35.2
AL8G17320 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 3.9e-35 154.1 266 35.3
Ca_15184_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.7e-35 153.3 270 32.6
Thhalv10003417m.g Eutrema salsugineum HOM05D003376 ORTHO05D000048 6.7e-35 153.3 277 35.7
Ca_22549_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.1e-34 152.5 272 34.6
Thhalv10001272m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.5e-34 152.1 157 49.7
Atru.chr4.959 Acer truncatum HOM05D005324 ORTHO05D001185 2.0e-34 151.8 354 29.9
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 5.7e-34 150.2 280 33.2
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 7.4e-34 149.8 280 32.9
Ca_05672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 7.4e-34 149.8 278 32.7
Thhalv10028343m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.8e-33 147.9 280 34.3
Glyma.19G076000 Glycine max HOM05D005324 ORTHO05D001185 2.6e-31 141.4 305 29.5
Cc00_g28290 Coffea canephora HOM05D003326 ORTHO05D001185 4.5e-31 140.6 267 31.8
Lj3g0022640 Lotus japonicus HOM05D005324 ORTHO05D001185 4.5e-31 140.6 338 31.1
Atru.chr10.1416 Acer truncatum HOM05D005324 ORTHO05D001185 6.5e-30 136.7 320 27.8
Ca_14763_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.5e-30 136.7 271 31.0
AL6G37690 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.1e-29 136.0 280 31.8
ECA246G4097 Erigeron canadensis HOM05D003376 ORTHO05D000002 9.4e-29 132.9 187 40.1
Thhalv10028029m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.7e-28 130.6 268 30.2
Ca_25846_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.0e-26 125.2 288 29.2
Atru.chr3.3306 Acer truncatum HOM05D000477 ORTHO05D001185 7.4e-26 123.2 251 32.3
Ca_14156_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.3e-25 122.5 288 28.1
Lj6g0006708 Lotus japonicus HOM05D005324 ORTHO05D001185 1.7e-25 122.1 243 33.7
Glyma.06G234900 Glycine max HOM05D005324 ORTHO05D001185 3.7e-25 120.9 236 28.8
Cc00_g34090 Coffea canephora HOM05D005324 ORTHO05D001185 4.8e-25 120.6 267 29.6
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.3e-25 120.2 230 33.0
Thhalv10002934m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 6.3e-25 120.2 225 34.7
Lj4g0014350 Lotus japonicus HOM05D005324 ORTHO05D001185 6.3e-25 120.2 223 31.4
Atru.chr3.2329 Acer truncatum HOM05D003326 ORTHO05D001185 1.1e-24 119.4 142 38.0
C04p09000 Brassica napus HOM05D003376 ORTHO05D001185 1.4e-24 119.0 249 29.7
Cc07_g21310 Coffea canephora HOM05D003376 ORTHO05D011089 2.4e-24 118.2 232 32.3
Atru.chr1.2372 Acer truncatum HOM05D005324 ORTHO05D001185 2.0e-23 115.2 164 37.8
Ca_24087_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.6e-23 114.8 183 35.5
Thhalv10000496m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.3e-22 112.5 160 36.2
Atru.chr9.334 Acer truncatum HOM05D005324 ORTHO05D001185 2.2e-22 111.7 124 41.1
Ca_22528_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.8e-22 110.9 252 28.6
Atru.chr13.2462 Acer truncatum HOM05D005324 ORTHO05D001185 5.0e-22 110.5 124 41.9
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 7.2e-21 106.7 112 43.8
BolC1t03750H Brassica oleracea HOM05D003376 ORTHO05D001185 7.2e-21 106.7 172 36.0
COL.COLO4_29280 Corchorus olitorius HOM05D003376 ORTHO05D001185 1.6e-20 105.5 343 26.2
Atru.chr9.596 Acer truncatum HOM05D005324 ORTHO05D001185 8.0e-20 103.2 255 28.6
Ca_19239_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.0e-20 103.2 212 31.6
Lj3g0011497 Lotus japonicus HOM05D005324 ORTHO05D001185 2.3e-19 101.7 103 43.7
Ca_13200_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.3e-18 97.8 150 30.0
Ca_29875_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.3e-18 97.8 150 30.0
Ca_23845_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 7.5e-18 96.7 117 39.3
Atru.chr5.1825 Acer truncatum HOM05D005324 ORTHO05D001185 1.3e-17 95.9 124 37.9
Carub.0002s1007 Capsella rubella HOM05D003376 ORTHO05D001185 6.3e-17 93.6 172 33.7
Cc00_g09810 Coffea canephora HOM05D003326 ORTHO05D001185 1.4e-16 92.4 166 31.9
BcaC06g35708 Brassica carinata HOM05D003376 ORTHO05D001185 1.2e-15 89.4 118 37.3
Ca_04090_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.5e-15 87.4 184 32.6
Lj6g0011364 Lotus japonicus HOM05D005324 ORTHO05D001185 1.7e-14 85.5 244 29.9
Ca_24116_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.2e-14 85.1 207 29.5
Atru.chr1.2264 Acer truncatum HOM05D005324 ORTHO05D001185 1.2e-12 79.3 353 22.9
Glyma.11G180400 Glycine max HOM05D005324 ORTHO05D001185 1.6e-12 79.0 234 26.1
BcaB05g23142 Brassica carinata HOM05D003376 ORTHO05D001185 1.4e-11 75.9 90 38.9
Ca_23844_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.8e-11 75.5 240 27.1
Ca_30746_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.8e-11 75.5 240 27.1
Ca_14332_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 8.8e-11 73.2 161 31.7
Atru.chr4.2110 Acer truncatum HOM05D005324 ORTHO05D001185 2.6e-10 71.6 143 32.9
BcaC09g49326 Brassica carinata HOM05D003376 ORTHO05D001185 2.6e-10 71.6 92 38.0
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 5.7e-10 70.5 64 48.4
Atru.chr5.1763 Acer truncatum HOM05D005324 ORTHO05D001185 9.8e-10 69.7 86 39.5
Manes.17G011850 Manihot esculenta HOM05D000158 ORTHO05D000197 1.7e-09 68.9 302 25.2
Lj1g0026229 Lotus japonicus HOM05D005324 ORTHO05D001185 4.8e-09 67.4 56 50.0
A04p12690 Brassica napus HOM05D003376 ORTHO05D001185 6.3e-09 67.0 123 30.1
BraA04t16927Z Brassica rapa HOM05D003376 ORTHO05D001185 6.3e-09 67.0 123 30.1
Ca_19340_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.8e-08 65.5 167 31.7
FAN23G1270 Fragaria x ananassa HOM05D008875 ORTHO05D011125 3.1e-08 64.7 315 23.5
Manes.03G000375 Manihot esculenta HOM05D000158 ORTHO05D000197 1.2e-07 62.8 314 23.2
Lj4g0024804 Lotus japonicus HOM05D005324 ORTHO05D001185 1.6e-07 62.4 51 52.9
AL8G17350 Arabidopsis lyrata HOM05D003376 ORTHO05D000002 2.0e-07 62.0 146 26.0
Ca_14697_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.0e-07 62.0 268 22.8
AL8G17340 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 5.9e-07 60.5 146 25.3
Oeu032940.1 Olea europaea HOM05D000158 ORTHO05D000197 7.7e-07 60.1 255 23.5
BcaB04g18321 Brassica carinata HOM05D003376 ORTHO05D001185 1.0e-06 59.7 64 43.8
Thhalv10024098m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 1.3e-06 59.3 221 27.6
AL8G17360 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 5.0e-06 57.4 143 32.9
Oeu022516.1 Olea europaea HOM05D000158 ORTHO05D010634 6.5e-06 57.0 255 22.7


User provided reference genes

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