Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 0.0e+00 1091.3 561 100.0
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 1.8e-126 457.2 553 55.9
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 4.5e-69 266.5 645 37.1
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 1.6e-50 204.9 550 34.9
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 4.0e-49 200.3 606 33.5
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 5.2e-49 199.9 641 32.4
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.5e-48 198.4 632 31.6
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 7.5e-48 196.1 626 31.0
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 1.7e-47 194.9 600 32.3
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 1.8e-46 191.4 689 30.6
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.6e-45 188.3 610 31.3
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 2.7e-45 187.6 595 31.8
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 4.5e-45 186.8 303 41.6
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 7.7e-45 186.0 673 30.8
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 2.2e-44 184.5 609 31.7
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.2e-44 184.5 512 34.2
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 3.8e-44 183.7 649 30.5
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 6.5e-44 183.0 637 31.6
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 6.5e-44 183.0 619 31.0
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 8.5e-44 182.6 656 29.6
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 8.5e-44 182.6 457 35.2
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 2.5e-43 181.0 385 36.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 9.4e-43 179.1 619 29.7
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 2.1e-42 177.9 370 38.4
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.6e-42 177.2 613 30.7
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.6e-42 177.2 613 30.7
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 3.6e-42 177.2 641 31.4
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 4.7e-42 176.8 623 31.3
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 2.3e-41 174.5 449 34.1
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.3e-41 174.5 665 30.2
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 2.3e-41 174.5 413 35.8
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 2.3e-41 174.5 456 33.8
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 8.8e-41 172.6 376 36.7
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.2e-40 172.2 413 33.7
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.4e-40 170.6 634 30.9
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 3.4e-40 170.6 646 31.0
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 5.7e-40 169.9 479 32.4
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 5.7e-40 169.9 460 33.7
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.5e-40 169.5 619 30.7
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.2e-39 167.9 567 30.2
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 6.3e-39 166.4 553 29.7
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 6.3e-39 166.4 469 33.7
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 8.3e-39 166.0 374 35.3
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.1e-38 165.6 621 30.1
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.4e-38 165.2 645 29.6
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.4e-38 164.5 652 29.1
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 4.1e-38 163.7 630 30.0
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 9.1e-38 162.5 464 33.8
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 2.0e-37 161.4 450 33.6
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 3.5e-37 160.6 604 28.5
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 5.9e-37 159.8 615 29.4
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.3e-36 158.7 607 29.0
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.3e-36 157.9 447 33.1
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 2.9e-36 157.5 368 35.9
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 6.5e-36 156.4 568 32.2
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 8.6e-36 156.0 307 38.4
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 9.5e-35 152.5 301 36.2
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 1.6e-34 151.8 270 39.6
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.8e-34 151.0 372 34.9
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 4.7e-34 150.2 593 30.4
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 4.7e-34 150.2 445 32.1
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 4.7e-34 150.2 462 31.6
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 4.7e-34 150.2 431 32.9
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 8.0e-34 149.4 599 30.2
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 1.4e-33 148.7 268 38.8
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 2.3e-33 147.9 663 28.8
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 3.0e-33 147.5 513 30.6
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 1.2e-32 145.6 421 32.3
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 1.2e-32 145.6 421 32.3
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 1.2e-32 145.6 687 27.2
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 3.4e-32 144.1 534 32.6
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 5.7e-32 143.3 566 28.1
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 9.8e-32 142.5 590 29.2
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.3e-31 142.1 635 28.8
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 2.8e-31 141.0 257 37.4
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 3.7e-31 140.6 383 33.4
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 3.7e-31 140.6 363 32.8
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 4.9e-31 140.2 619 29.9
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 8.3e-31 139.4 257 37.4
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 8.3e-31 139.4 645 29.3
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 1.1e-30 139.0 534 28.8
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 1.4e-30 138.7 329 35.9
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.8e-30 138.3 590 29.0
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 4.1e-30 137.1 464 31.9
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 2.0e-29 134.8 594 29.6
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 2.0e-29 134.8 613 29.2
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.0e-29 134.8 432 30.3
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 3.5e-29 134.0 703 26.7
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 7.8e-29 132.9 480 30.4
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 7.8e-29 132.9 454 31.7
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 2.3e-28 131.3 427 31.6
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 5.0e-28 130.2 637 27.9
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.9e-27 128.3 577 28.1
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 3.3e-27 127.5 441 31.3
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 3.3e-27 127.5 473 30.2
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 6.1e-26 123.2 135 50.4
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 4.0e-25 120.6 336 34.8
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.5e-24 118.6 326 33.4
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.3e-23 115.5 388 29.6
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 5.4e-22 110.2 363 29.2
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 2.5e-19 101.3 276 30.4
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.1e-18 98.2 431 26.0
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 8.0e-18 96.3 143 43.4
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.1e-17 95.9 305 29.2
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 6.8e-17 93.2 567 25.6
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.2e-16 92.4 363 29.2
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 9.8e-16 89.4 441 24.9


User provided reference genes

Program Settings