Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.2e-68 263.1 136 100.0
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 9.3e-45 183.7 131 71.0
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 9.3e-45 183.7 136 66.2
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 1.9e-29 132.9 127 51.2
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 2.5e-29 132.5 118 58.5
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 9.3e-29 130.6 135 51.9
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.6e-28 129.8 130 53.1
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.6e-28 129.8 133 52.6
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.5e-28 128.6 125 52.0
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 6.0e-28 127.9 132 50.0
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.0e-27 125.6 137 48.9
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 5.1e-27 124.8 132 49.2
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 8.7e-27 124.0 132 47.0
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 8.7e-27 124.0 137 48.2
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 8.7e-27 124.0 137 48.2
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 8.7e-27 124.0 131 49.6
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.1e-26 123.6 137 48.2
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 3.3e-26 122.1 127 48.8
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 4.3e-26 121.7 137 47.4
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 7.4e-26 120.9 135 46.7
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 9.7e-26 120.6 129 46.5
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 1.6e-25 119.8 125 48.8
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.6e-25 119.8 123 49.6
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 4.8e-25 118.2 118 52.5
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 6.3e-25 117.9 122 53.3
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 6.3e-25 117.9 132 47.0
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 8.2e-25 117.5 109 56.0
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 1.1e-24 117.1 101 58.4
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 1.1e-24 117.1 106 53.8
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 1.4e-24 116.7 129 48.8
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 3.1e-24 115.5 119 50.4
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 3.1e-24 115.5 119 48.7
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 5.3e-24 114.8 117 50.4
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 5.3e-24 114.8 119 47.9
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 5.3e-24 114.8 117 51.3
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 9.0e-24 114.0 135 43.0
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 9.0e-24 114.0 136 46.3
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.2e-23 113.6 128 45.3
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.2e-23 113.6 128 45.3
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 1.2e-23 113.6 133 46.6
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.5e-23 113.2 128 47.7
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 2.0e-23 112.8 126 46.0
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 2.6e-23 112.5 121 51.2
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 3.4e-23 112.1 135 42.2
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 4.5e-23 111.7 135 44.4
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 4.5e-23 111.7 113 49.6
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 4.5e-23 111.7 138 46.4
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 4.5e-23 111.7 138 44.9
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 5.9e-23 111.3 119 51.3
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 7.6e-23 110.9 126 46.8
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.3e-22 110.2 119 47.1
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.3e-22 110.2 126 46.8
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 2.2e-22 109.4 127 46.5
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.9e-22 109.0 138 45.7
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 2.9e-22 109.0 118 50.0
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 3.8e-22 108.6 124 46.8
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 3.8e-22 108.6 123 48.8
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 5.0e-22 108.2 124 46.8
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 8.5e-22 107.5 118 46.6
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 1.1e-21 107.1 123 46.3
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 2.5e-21 105.9 123 47.2
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 3.2e-21 105.5 134 43.3
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 3.2e-21 105.5 135 40.7
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 4.2e-21 105.1 147 38.8
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 5.5e-21 104.8 115 50.4
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 7.2e-21 104.4 111 47.7
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 9.4e-21 104.0 147 38.8
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 1.2e-20 103.6 125 45.6
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 2.1e-20 102.8 132 40.9
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 2.1e-20 102.8 128 44.5
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 4.6e-20 101.7 121 44.6
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 6.1e-20 101.3 119 42.0
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 7.9e-20 100.9 132 40.9
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 7.9e-20 100.9 127 44.9
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 7.9e-20 100.9 125 46.4
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 5.1e-19 98.2 131 44.3
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 5.1e-19 98.2 138 41.3
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 1.9e-18 96.3 133 40.6
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 2.5e-18 95.9 127 40.2
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.3e-18 95.5 127 44.1
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 4.3e-18 95.1 130 38.5
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 5.7e-18 94.7 135 40.0
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 5.7e-18 94.7 133 39.8
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 9.7e-18 94.0 133 41.4
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 1.3e-17 93.6 123 43.9
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 1.7e-17 93.2 110 42.7
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 1.7e-17 93.2 147 39.5
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 1.7e-17 93.2 127 42.5
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 2.8e-17 92.4 138 41.3
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 6.3e-17 91.3 114 48.2
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 8.2e-17 90.9 115 47.8
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.4e-16 90.1 112 47.3
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 1.4e-16 90.1 99 50.5
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 3.1e-16 89.0 115 45.2
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 3.1e-16 89.0 115 45.2
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 3.1e-16 89.0 112 45.5
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 4.1e-16 88.6 110 48.2
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 4.1e-16 88.6 110 47.3
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 4.1e-16 88.6 108 43.5
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 5.3e-16 88.2 111 46.8
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 6.9e-16 87.8 112 46.4
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 1.5e-15 86.7 115 45.2
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 1.5e-15 86.7 115 45.2
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 2.0e-15 86.3 115 44.3
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 2.0e-15 86.3 112 43.8
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 3.4e-15 85.5 114 44.7
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 3.4e-15 85.5 114 44.7
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 7.7e-15 84.3 115 44.3
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 1.0e-14 84.0 123 43.1
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 1.3e-14 83.6 114 44.7
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 1.3e-14 83.6 114 43.0
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.3e-14 83.6 119 40.3
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 2.2e-14 82.8 120 40.8
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 3.8e-14 82.0 115 43.5
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 5.5e-13 78.2 116 38.8
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 5.5e-13 78.2 136 36.8
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 9.4e-13 77.4 126 33.3
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 9.4e-13 77.4 106 44.3
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 1.2e-12 77.0 122 41.0
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 2.0e-10 69.7 143 33.6
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 2.6e-10 69.3 118 41.5
Peaxi162Scf00101g00083 Petunia axillaris HOM05D005728 ORTHO05D005733 1.7e-09 66.6 135 34.1
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 2.2e-09 66.2 118 32.2
Gorai.003G141500 Gossypium raimondii HOM05D005728 ORTHO05D005733 8.2e-09 64.3 98 39.8
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 1.8e-08 63.2 126 33.3
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 1.8e-08 63.2 126 33.3
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 3.1e-08 62.4 129 29.5
BraA10t43864Z Brassica rapa HOM05D010860 ORTHO05D005733 4.1e-08 62.0 131 32.8
AL8G37240 Arabidopsis lyrata HOM05D010860 ORTHO05D005733 5.3e-08 61.6 113 33.6
A10p17850 Brassica napus HOM05D010860 ORTHO05D005733 2.0e-07 59.7 130 30.8
AT5G60650 Arabidopsis thaliana HOM05D010860 ORTHO05D005733 3.4e-07 58.9 128 32.0
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 5.9e-07 58.2 124 33.9
unitig_21.g20302 Utricularia gibba HOM05D005728 ORTHO05D005733 7.7e-07 57.8 124 38.7
BolC9t58211H Brassica oleracea HOM05D010860 ORTHO05D005733 1.0e-06 57.4 130 30.0
C09p53380 Brassica napus HOM05D010860 ORTHO05D005733 2.9e-06 55.8 130 29.2
Carub.0008s2133 Capsella rubella HOM05D010860 ORTHO05D005733 2.9e-06 55.8 144 29.2
Thhalv10014945m.g Eutrema salsugineum HOM05D010860 ORTHO05D005733 3.8e-06 55.5 128 30.5
BcaC04g19726 Brassica carinata HOM05D010860 ORTHO05D005733 5.0e-06 55.1 130 29.2
BcaB08g36363 Brassica carinata HOM05D010860 ORTHO05D005733 8.5e-06 54.3 131 30.5


User provided reference genes

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