Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1191 Erigeron canadensis HOM05D004744 ORTHO05D005655 0.0e+00 1228.0 632 100.0
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 3.0e-279 964.9 625 79.4
HanXRQChr01g0030631 Helianthus annuus HOM05D004744 ORTHO05D005655 2.5e-278 961.8 624 79.2
Actinidia13213 Actinidia chinensis HOM05D004744 ORTHO05D005655 1.7e-221 773.1 635 63.0
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 3.4e-214 748.8 624 62.5
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 1.7e-213 746.5 634 61.0
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 2.4e-212 742.7 633 59.9
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 4.5e-211 738.4 627 60.8
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 4.4e-206 721.8 635 60.2
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 2.4e-204 716.1 625 59.2
Potri.018G022800 Populus trichocarpa HOM05D004744 ORTHO05D005655 4.1e-204 715.3 634 59.0
Sabra18G0025200 Salix brachista HOM05D004744 ORTHO05D005655 1.6e-203 713.4 634 59.0
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 1.0e-202 710.7 629 58.8
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 6.2e-200 701.4 633 57.7
Gohir.D06G101900 Gossypium hirsutum HOM05D004744 ORTHO05D005655 1.1e-199 700.7 633 57.7
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 5.2e-199 698.4 643 56.5
Gorai.010G116900 Gossypium raimondii HOM05D004744 ORTHO05D005655 2.0e-198 696.4 638 57.4
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 3.7e-197 692.2 630 57.0
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 8.3e-197 691.0 634 56.8
MD15G1130500 Malus domestica HOM05D004744 ORTHO05D005655 8.3e-197 691.0 636 56.4
THA.LOC104805576 Tarenaya hassleriana HOM05D004744 ORTHO05D005655 4.1e-196 688.7 631 55.9
Psat5g030800 Pisum sativum HOM05D004744 ORTHO05D005655 7.0e-196 688.0 620 57.3
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 9.2e-196 687.6 629 55.3
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.2e-195 687.2 629 55.3
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 2.7e-195 686.0 629 54.7
Lalb_Chr08g0244261 Lupinus albus HOM05D004744 ORTHO05D005655 4.6e-195 685.3 629 56.1
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 3.9e-194 682.2 628 57.2
PGR142G3966 Punica granatum HOM05D004744 ORTHO05D005655 5.0e-194 681.8 640 56.1
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 6.6e-194 681.4 630 56.2
CANSAT01G0649 Cannabis sativa HOM05D004744 ORTHO05D005655 8.6e-194 681.0 632 55.4
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 6.2e-192 674.9 629 54.4
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 8.9e-191 671.0 664 55.1
AL7G19840 Arabidopsis lyrata HOM05D004744 ORTHO05D005655 1.2e-190 670.6 624 56.2
Aqoxy7G03541 Aquilegia oxysepala HOM05D004744 ORTHO05D005655 2.6e-190 669.5 626 55.6
Thhalv10024640m.g Eutrema salsugineum HOM05D004744 ORTHO05D005655 5.8e-190 668.3 646 54.2
BcaC09g51994 Brassica carinata HOM05D004744 ORTHO05D005655 7.5e-190 667.9 627 55.8
BolC1t00685H Brassica oleracea HOM05D004744 ORTHO05D005655 7.5e-190 667.9 627 55.8
C01p06880 Brassica napus HOM05D004744 ORTHO05D005655 9.9e-190 667.5 627 55.8
CARHR239950 Cardamine hirsuta HOM05D004744 ORTHO05D005655 9.9e-190 667.5 625 55.4
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 2.2e-189 666.4 637 56.0
Carub.0007s0850 Capsella rubella HOM05D004744 ORTHO05D005655 3.7e-189 665.6 624 55.6
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 3.7e-189 665.6 572 61.0
Sp7g29850 Schrenkiella parvula HOM05D004744 ORTHO05D005655 4.9e-189 665.2 626 55.8
Cc08_g00230 Coffea canephora HOM05D004744 ORTHO05D005655 8.3e-189 664.5 636 55.8
A01p06240 Brassica napus HOM05D004744 ORTHO05D005655 1.1e-188 664.1 625 55.2
BcaNung03134 Brassica carinata HOM05D004744 ORTHO05D005655 1.6e-187 660.2 627 54.5
BraA01t00591Z Brassica rapa HOM05D004744 ORTHO05D005655 1.6e-187 660.2 630 54.9
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 3.5e-187 659.1 630 53.7
Medtr3g106410 Medicago truncatula HOM05D004744 ORTHO05D005655 3.0e-186 656.0 630 55.2
Aa31LG2G18030 Aethionema arabicum HOM05D004744 ORTHO05D005655 8.6e-186 654.4 626 54.6
TWI32G0623 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 2.5e-185 652.9 597 58.1
arahy.Tifrunner.gnm1.ann1.8I84Z2 Arachis hypogaea HOM05D004744 ORTHO05D005655 3.3e-185 652.5 629 54.5
PSO063G6514 Papaver somniferum HOM05D004744 ORTHO05D005655 5.6e-185 651.7 635 53.4
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 1.2e-184 650.6 638 55.2
TPR.G3127 Trifolium pratense HOM05D004744 ORTHO05D005655 1.2e-184 650.6 661 52.8
AT4G32050 Arabidopsis thaliana HOM05D004744 ORTHO05D005655 4.7e-184 648.7 619 55.9
vmacro11210 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 1.8e-183 646.7 521 63.5
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 2.4e-183 646.4 630 54.6
vmacro11211 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 4.0e-183 645.6 521 63.3
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 1.5e-182 643.7 631 53.9
arahy.Tifrunner.gnm1.ann1.LGG0U4 Arachis hypogaea HOM05D004744 ORTHO05D005655 2.0e-182 643.3 629 54.4
VMungo0720G0351 Vigna mungo HOM05D004744 ORTHO05D005655 4.4e-182 642.1 629 53.3
Glyma.02G173300 Glycine max HOM05D004744 ORTHO05D005655 9.9e-182 641.0 618 54.2
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 6.4e-181 638.3 631 53.1
Solyc08g041780.3 Solanum lycopersicum HOM05D004744 ORTHO05D005655 1.9e-180 636.7 643 52.9
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 9.2e-180 634.4 660 52.7
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 9.2e-180 634.4 631 53.2
Phvul.007G279700 Phaseolus vulgaris HOM05D004744 ORTHO05D005655 4.6e-179 632.1 637 53.1
Glyma.02G001200 Glycine max HOM05D004744 ORTHO05D005655 1.7e-178 630.2 618 53.9
DCAR_000582 Daucus carota HOM05D004744 ORTHO05D005655 3.0e-178 629.4 621 52.3
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 1.2e-176 624.0 662 52.1
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 2.9e-173 612.8 569 55.5
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 7.1e-172 608.2 569 55.5
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 1.3e-170 604.0 513 61.4
ClCG05G016620 Citrullus lanatus HOM05D004744 ORTHO05D005655 3.3e-169 599.4 627 51.4
Cpa.g.sc187.24 Carica papaya HOM05D004744 ORTHO05D005655 1.1e-167 594.3 543 57.3
EL10Ac3g06914 Beta vulgaris HOM05D004744 ORTHO05D005655 1.8e-167 593.6 631 49.1
AUR62015365 Chenopodium quinoa HOM05D004744 ORTHO05D005655 2.6e-166 589.7 592 50.7
CDE05G1537 Ceratophyllum demersum HOM05D004744 ORTHO05D005655 3.4e-166 589.3 624 49.5
AUR62012029 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.9e-164 583.6 592 50.3
CAN.G435.2 Capsicum annuum HOM05D004744 ORTHO05D005655 6.7e-162 575.1 552 55.4
ATR0767G197 Amborella trichopoda HOM05D004744 ORTHO05D005655 9.6e-161 571.2 630 47.5
Lj1g0024423 Lotus japonicus HOM05D004744 ORTHO05D005655 4.5e-158 562.4 632 49.5
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 3.8e-157 559.3 530 54.5
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 4.6e-155 552.4 570 51.8
BcaC06g30946 Brassica carinata HOM05D004744 ORTHO05D005655 9.6e-153 544.7 633 48.3
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 8.2e-152 541.6 560 51.8
Os02g0798700 Oryza sativa ssp. japonica HOM05D004744 ORTHO05D005655 2.6e-150 536.6 628 45.5
HPP92_003269 Vanilla planifolia HOM05D004744 ORTHO05D005655 5.8e-150 535.4 626 46.3
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 2.5e-148 530.0 512 53.5
COL.COLO4_18910 Corchorus olitorius HOM05D004744 ORTHO05D005655 3.1e-143 513.1 451 59.2
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 2.1e-139 500.4 467 56.1
RcHm_v2.0_Chr2g0139901 Rosa chinensis HOM05D004744 ORTHO05D005655 3.0e-138 496.5 609 47.9
Gohir.A06G099700 Gossypium hirsutum HOM05D004744 ORTHO05D005655 3.9e-138 496.1 462 56.3
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 8.8e-138 495.0 630 45.4
Hund06750 Selenicereus undatus HOM05D004744 ORTHO05D005655 2.2e-133 480.3 663 41.6
TPR.G21273 Trifolium pratense HOM05D004744 ORTHO05D005655 3.1e-127 459.9 582 45.9
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 1.5e-116 424.5 386 54.9
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 7.2e-116 422.2 379 58.6
Zm00001eb257970 Zea mays HOM05D004744 ORTHO05D005655 6.1e-107 392.5 473 46.1
TPR.G18367 Trifolium pratense HOM05D004744 ORTHO05D005655 1.2e-94 351.7 388 52.6
unitig_0.g2772 Utricularia gibba HOM05D004744 ORTHO05D005655 9.5e-92 342.0 632 37.0
Pp3c12_9830 Physcomitrium patens HOM05D004744 ORTHO05D005655 1.6e-91 341.3 632 33.7
Mapoly0033s0067 Marchantia polymorpha HOM05D004744 ORTHO05D005655 5.0e-85 319.7 627 31.9
SMO134G0198 Selaginella moellendorffii HOM05D004744 ORTHO05D005655 4.1e-79 300.1 619 32.8
AagrBONN_evm.TU.Sc2ySwM_117.465 Anthoceros agrestis HOM05D004744 ORTHO05D005655 1.1e-74 285.4 510 33.7
C07p37210 Brassica napus HOM05D004744 ORTHO05D005655 4.0e-74 283.5 519 36.2
BolC7t44231H Brassica oleracea HOM05D004744 ORTHO05D005655 4.0e-74 283.5 519 36.2
vmacro12150 Vaccinium macrocarpon HOM05D000172 ORTHO05D000781 1.9e-71 274.6 367 45.5
BcaC06g33762 Brassica carinata HOM05D004744 ORTHO05D005655 1.0e-69 268.9 374 42.2
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 2.3e-61 241.1 261 49.4
BraA06t26993Z Brassica rapa HOM05D004744 ORTHO05D005655 1.6e-46 191.8 250 43.2
A06p40720 Brassica napus HOM05D004744 ORTHO05D005655 7.9e-46 189.5 250 43.2
Ah.14g079380 Amaranthus hybridus HOM05D004744 ORTHO05D005655 1.8e-45 188.3 184 51.1
DCAR_000575 Daucus carota HOM05D004744 ORTHO05D005655 1.8e-37 161.8 141 57.4
CBR_g34813 Chara braunii HOM05D004744 ORTHO05D005655 8.7e-37 159.5 385 29.9
C08p49950 Brassica napus HOM05D004744 ORTHO05D005655 9.0e-34 149.4 179 46.9
GSVIVG01011258001 Vitis vinifera HOM05D004744 ORTHO05D005655 9.0e-34 149.4 128 60.9
BolC8t47068H Brassica oleracea HOM05D004744 ORTHO05D005655 1.2e-33 149.1 162 50.6
Ah.14g079390 Amaranthus hybridus HOM05D004744 ORTHO05D005655 7.6e-33 146.4 223 41.3
DCAR_000580 Daucus carota HOM05D004744 ORTHO05D005655 6.5e-32 143.3 166 44.0
BcaC06g30944 Brassica carinata HOM05D004744 ORTHO05D005655 1.4e-31 142.1 160 45.6
PGSC0003DMG400015627 Solanum tuberosum HOM05D004744 ORTHO05D005655 4.6e-30 137.1 150 51.3
SEGI_40333 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 1.3e-29 135.6 142 49.3
FAN14G1088 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.9e-28 131.7 411 28.2
BcaC07g41939 Brassica carinata HOM05D004744 ORTHO05D005655 2.0e-25 121.7 140 49.3
Pp3c4_13414 Physcomitrium patens HOM05D004744 ORTHO05D005655 7.7e-25 119.8 324 31.5
FAN09G4690 Fragaria x ananassa HOM05D004744 ORTHO05D005655 3.2e-23 114.4 381 28.3
FvH4_6g32120 Fragaria vesca HOM05D004744 ORTHO05D005655 5.1e-21 107.1 411 26.3
Eucgr.L02780 Eucalyptus grandis HOM05D004744 ORTHO05D005655 2.2e-19 101.7 65 75.4
DCAR_000578 Daucus carota HOM05D004744 ORTHO05D005655 4.2e-15 87.4 116 43.1
SHI18506 Sapria himalayana HOM05D004744 ORTHO05D005655 4.2e-15 87.4 55 74.5
SEGI_39231 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 1.8e-13 82.0 149 36.2
COL.COLO4_18909 Corchorus olitorius HOM05D004744 ORTHO05D005655 6.7e-13 80.1 80 53.8
SHI18507 Sapria himalayana HOM05D004744 ORTHO05D005655 2.2e-11 75.1 90 48.9
Cpa.g.sc187.23 Carica papaya HOM05D004744 ORTHO05D005655 1.1e-10 72.8 85 47.1
Cre07.g323650 Chlamydomonas reinhardtii HOM05D004744 ORTHO05D005655 3.1e-10 71.2 113 36.3
unitig_748.g7861 Utricularia gibba HOM05D004744 ORTHO05D005655 5.3e-10 70.5 89 44.9
Lsat_1_v5_gn_2_25721 Lactuca sativa HOM05D004744 ORTHO05D005655 9.1e-10 69.7 210 28.6
C08p02720 Brassica napus HOM05D004744 ORTHO05D005655 1.2e-09 69.3 71 52.1
Lsat_1_v5_gn_7_37280 Lactuca sativa HOM05D002279 ORTHO05D017063 2.6e-09 68.2 53 62.3
Dinv18155 Davidia involucrata HOM05D004744 ORTHO05D005655 1.3e-08 65.9 37 83.8
SEGI_08303 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 5.5e-07 60.5 69 42.0
MELO3C032098.2 Cucumis melo HOM05D004744 ORTHO05D005655 4.7e-06 57.4 84 38.1
Rhsim01G0220500 Rhododendron simsii HOM05D004744 ORTHO05D005655 4.7e-06 57.4 50 64.0


User provided reference genes

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